RNA–Protein interactions for RNA: ENST00000588183.5

HDHD2-205, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

TSL 1 (best)

Gene HDHD2, Length 2,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-205ENST00000588183 SEC61GP60059 68 aa8.57□□□□□ -1.04
HDHD2-205ENST00000588183 TPRXLQ17RH7 258 aa8.57□□□□□ -1.04
HDHD2-205ENST00000588183 LPAP08519 4548 aa8.57□□□□□ -1.04
HDHD2-205ENST00000588183 LRP2P98164 4655 aa8.56□□□□□ -1.04
HDHD2-205ENST00000588183 SPATA8Q6RVD6 105 aa8.56□□□□□ -1.04
HDHD2-205ENST00000588183 MIR22HGQ0VDD5 57 aa8.55□□□□□ -1.04
HDHD2-205ENST00000588183 A6NN06 94 aa8.52□□□□□ -1.05
HDHD2-205ENST00000588183 KRTAP3-3Q9BYR6 98 aa8.48□□□□□ -1.05
HDHD2-205ENST00000588183 HERC2O95714 4834 aa8.44□□□□□ -1.06
HDHD2-205ENST00000588183 S4R3F8 94 aa8.44□□□□□ -1.06
HDHD2-205ENST00000588183 BIRC6Q9NR09 4857 aa8.41□□□□□ -1.06
HDHD2-205ENST00000588183 H0YAA0 97 aa8.4□□□□□ -1.06
HDHD2-205ENST00000588183 H1FX-AS1Q4G0G2 97 aa8.4□□□□□ -1.06
HDHD2-205ENST00000588183 A0A1B0GU33 70 aa8.39□□□□□ -1.07
HDHD2-205ENST00000588183 J3QL48 77 aa8.39□□□□□ -1.07
HDHD2-205ENST00000588183 KTN1-AS1Q86SY8 53 aa8.36□□□□□ -1.07
HDHD2-205ENST00000588183 RBM12B-AS1Q9P1G2 102 aa8.3□□□□□ -1.08
HDHD2-205ENST00000588183 KRTAP10-6P60371 365 aaPredicted RBP8.3□□□□□ -1.08
HDHD2-205ENST00000588183 KRTAP3-2Q9BYR7 98 aa8.27□□□□□ -1.08
HDHD2-205ENST00000588183 MUC17Q685J3 4493 aa8.27□□□□□ -1.09
HDHD2-205ENST00000588183 SEC61BP60468 96 aaKnown RBP8.25□□□□□ -1.09
HDHD2-205ENST00000588183 KRTAP4-1Q9BYQ7 146 aa8.21□□□□□ -1.1
HDHD2-205ENST00000588183 P0C880 135 aa8.2□□□□□ -1.1
HDHD2-205ENST00000588183 KRTAP13-4Q3LI77 160 aa8.19□□□□□ -1.1
HDHD2-205ENST00000588183 ADM2Q7Z4H4 148 aa8.17□□□□□ -1.1
HDHD2-205ENST00000588183 CSAG1Q6PB30 78 aa8.15□□□□□ -1.1
HDHD2-205ENST00000588183 PRAC1Q96KF2 57 aa8.14□□□□□ -1.11
HDHD2-205ENST00000588183 A0A0D9SG42 100 aa8.09□□□□□ -1.12
HDHD2-205ENST00000588183 PCLOQ9Y6V0 5065 aa8.05□□□□□ -1.12
HDHD2-205ENST00000588183 HERC1Q15751 4861 aa8.02□□□□□ -1.13
HDHD2-205ENST00000588183 K7ERS5 55 aa8.01□□□□□ -1.13
HDHD2-205ENST00000588183 KRTAP19-2Q3LHN2 52 aa8□□□□□ -1.13
HDHD2-205ENST00000588183 HMCN2Q8NDA2 5059 aa7.98□□□□□ -1.13
HDHD2-205ENST00000588183 MUC2Q02817 5179 aa7.91□□□□□ -1.14
HDHD2-205ENST00000588183 KRTAP12-2P59991 146 aa7.88□□□□□ -1.15
HDHD2-205ENST00000588183 M0QZ58 72 aa7.88□□□□□ -1.15
HDHD2-205ENST00000588183 KRTAP12-1P59990 96 aa7.84□□□□□ -1.15
HDHD2-205ENST00000588183 FLGP20930 4061 aaPredicted RBP7.83□□□□□ -1.16
HDHD2-205ENST00000588183 LORP23490 312 aaPredicted RBP7.82□□□□□ -1.16
HDHD2-205ENST00000588183 SPINT4Q6UDR6 99 aa7.82□□□□□ -1.16
HDHD2-205ENST00000588183 ROMO1P60602 79 aa7.81□□□□□ -1.16
HDHD2-205ENST00000588183 R4GN34 69 aa7.78□□□□□ -1.16
HDHD2-205ENST00000588183 CRIPTQ9P021 101 aa7.77□□□□□ -1.17
HDHD2-205ENST00000588183 LINC01554Q52M75 96 aa7.76□□□□□ -1.17
HDHD2-205ENST00000588183 KRTAP25-1Q3LHN0 102 aa7.74□□□□□ -1.17
HDHD2-205ENST00000588183 LCE2CQ5TA81 110 aa7.64□□□□□ -1.19
HDHD2-205ENST00000588183 RNF213Q63HN8 5207 aa7.62□□□□□ -1.19
HDHD2-205ENST00000588183 FAT4Q6V0I7 4981 aa7.59□□□□□ -1.19
HDHD2-205ENST00000588183 UBR4Q5T4S7 5183 aa7.58□□□□□ -1.2
HDHD2-205ENST00000588183 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
HDHD2-205ENST00000588183 MT1HP80294 61 aa7.46□□□□□ -1.22
HDHD2-205ENST00000588183 M0R2T5 61 aa7.43□□□□□ -1.22
HDHD2-205ENST00000588183 CAMK2N1Q7Z7J9 78 aa7.35□□□□□ -1.23
HDHD2-205ENST00000588183 MT2AP02795 61 aa7.27□□□□□ -1.25
HDHD2-205ENST00000588183 MT1FP04733 61 aa7.27□□□□□ -1.25
HDHD2-205ENST00000588183 KRTAP19-1Q8IUB9 90 aa7.27□□□□□ -1.25
HDHD2-205ENST00000588183 SPRR2GQ9BYE4 73 aa7.27□□□□□ -1.25
HDHD2-205ENST00000588183 KRTAP9-8Q9BYQ0 159 aa7.24□□□□□ -1.25
HDHD2-205ENST00000588183 KRTAP10-10P60014 251 aa7.22□□□□□ -1.25
HDHD2-205ENST00000588183 LCE2DQ5TA82 110 aaPredicted RBP7.17□□□□□ -1.26
HDHD2-205ENST00000588183 PLAC4Q8WY50 150 aa7.12□□□□□ -1.27
HDHD2-205ENST00000588183 TNP1P09430 55 aa7.03□□□□□ -1.28
HDHD2-205ENST00000588183 KRTAP19-8Q3LI54 63 aa7.01□□□□□ -1.29
HDHD2-205ENST00000588183 PP632Q6XCG6 107 aa6.99□□□□□ -1.29
HDHD2-205ENST00000588183 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
HDHD2-205ENST00000588183 MT1BP07438 61 aa6.95□□□□□ -1.3
HDHD2-205ENST00000588183 KRTAP9-3Q9BYQ3 159 aa6.95□□□□□ -1.3
HDHD2-205ENST00000588183 KRTAP23-1A1A580 65 aa6.84□□□□□ -1.32
HDHD2-205ENST00000588183 MT1XP80297 61 aa6.82□□□□□ -1.32
HDHD2-205ENST00000588183 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
HDHD2-205ENST00000588183 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
HDHD2-205ENST00000588183 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
HDHD2-205ENST00000588183 LCE2BO14633 110 aa6.73□□□□□ -1.33
HDHD2-205ENST00000588183 NDUFAF8A1L188 74 aa6.66□□□□□ -1.34
HDHD2-205ENST00000588183 KRTAP10-7P60409 375 aaPredicted RBP6.61□□□□□ -1.35
HDHD2-205ENST00000588183 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
HDHD2-205ENST00000588183 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
HDHD2-205ENST00000588183 USH2AO75445 5202 aa6.57□□□□□ -1.36
HDHD2-205ENST00000588183 H3BS24 57 aa6.56□□□□□ -1.36
HDHD2-205ENST00000588183 KRTAP8-1Q8IUC2 63 aa6.54□□□□□ -1.36
HDHD2-205ENST00000588183 SPRR5A0A1B0GTR4 108 aa6.43□□□□□ -1.38
HDHD2-205ENST00000588183 KRTAP12-3P60328 96 aa6.41□□□□□ -1.38
HDHD2-205ENST00000588183 LUZP6Q538Z0 58 aa6.39□□□□□ -1.39
HDHD2-205ENST00000588183 KMT2DO14686 5537 aa6.32□□□□□ -1.4
HDHD2-205ENST00000588183 KRTAP4-8A0A0G2JLE6 195 aa6.28□□□□□ -1.4
HDHD2-205ENST00000588183 KRTAP19-5Q3LI72 72 aa6.28□□□□□ -1.4
HDHD2-205ENST00000588183 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
HDHD2-205ENST00000588183 SSPOA2VEC9 5147 aa6.28□□□□□ -1.4
HDHD2-205ENST00000588183 KRTAP19-6Q3LI70 58 aa6.13□□□□□ -1.43
HDHD2-205ENST00000588183 KRTAP19-7Q3SYF9 63 aa6.08□□□□□ -1.44
HDHD2-205ENST00000588183 FSIP2Q5CZC0 6907 aa6.04□□□□□ -1.44
HDHD2-205ENST00000588183 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
HDHD2-205ENST00000588183 MT1EP04732 61 aa5.94□□□□□ -1.46
HDHD2-205ENST00000588183 FCGBPQ9Y6R7 5405 aaPredicted RBP5.88□□□□□ -1.47
HDHD2-205ENST00000588183 MT1LQ93083 61 aa5.88□□□□□ -1.47
HDHD2-205ENST00000588183 KRTAP4-7Q9BYR0 210 aa5.87□□□□□ -1.47
HDHD2-205ENST00000588183 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
HDHD2-205ENST00000588183 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
HDHD2-205ENST00000588183 A0A0A0MQY5 61 aa5.83□□□□□ -1.48
HDHD2-205ENST00000588183 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms