RNA–Protein interactions for RNA: ENST00000588063.1

AP001029.3-201, humanhuman

BASIC

Gene AP001029.3, Length 596 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001029.3-201ENST00000588063 NIPBLQ6KC79 2804 aaeCLIP1.17□□□□□ -2.22
AP001029.3-201ENST00000588063 ATRQ13535 2644 aa1.17□□□□□ -2.22
AP001029.3-201ENST00000588063 MYO15AQ9UKN7 3530 aa1.16□□□□□ -2.22
AP001029.3-201ENST00000588063 TEP1Q99973 2627 aaKnown RBP1.16□□□□□ -2.22
AP001029.3-201ENST00000588063 DCHS1Q96JQ0 3298 aa1.16□□□□□ -2.22
AP001029.3-201ENST00000588063 RPS29P62273 56 aaKnown RBP1.16□□□□□ -2.22
AP001029.3-201ENST00000588063 KRTAP21-3Q3LHN1 58 aa1.16□□□□□ -2.22
AP001029.3-201ENST00000588063 SMG1Q96Q15 3661 aaKnown RBP1.15□□□□□ -2.23
AP001029.3-201ENST00000588063 USP24Q9UPU5 2620 aa1.15□□□□□ -2.23
AP001029.3-201ENST00000588063 FASNP49327 2511 aaKnown RBP1.15□□□□□ -2.23
AP001029.3-201ENST00000588063 PDZD2O15018 2839 aa1.14□□□□□ -2.23
AP001029.3-201ENST00000588063 HIVEP1P15822 2718 aa1.14□□□□□ -2.23
AP001029.3-201ENST00000588063 CSMD1Q96PZ7 3565 aa1.14□□□□□ -2.23
AP001029.3-201ENST00000588063 FLNBO75369 2602 aaKnown RBP1.13□□□□□ -2.23
AP001029.3-201ENST00000588063 ZFHX4Q86UP3 3567 aa1.13□□□□□ -2.23
AP001029.3-201ENST00000588063 TENM2Q9NT68 2774 aa1.13□□□□□ -2.23
AP001029.3-201ENST00000588063 VWFP04275 2813 aa1.13□□□□□ -2.23
AP001029.3-201ENST00000588063 ITPR2Q14571 2701 aa1.13□□□□□ -2.23
AP001029.3-201ENST00000588063 MAST4O15021 2626 aa1.13□□□□□ -2.23
AP001029.3-201ENST00000588063 M0QZ58 72 aa1.12□□□□□ -2.23
AP001029.3-201ENST00000588063 DMDP11532 3685 aa1.12□□□□□ -2.23
AP001029.3-201ENST00000588063 OTOGQ6ZRI0 2925 aa1.12□□□□□ -2.23
AP001029.3-201ENST00000588063 NSD1Q96L73 2696 aaPredicted RBP1.12□□□□□ -2.23
AP001029.3-201ENST00000588063 TENM1Q9UKZ4 2725 aa1.11□□□□□ -2.23
AP001029.3-201ENST00000588063 C9orf92A6NGG3 77 aa1.11□□□□□ -2.23
AP001029.3-201ENST00000588063 Q5VSD8 79 aa1.11□□□□□ -2.23
AP001029.3-201ENST00000588063 RELNP78509 3460 aa1.11□□□□□ -2.23
AP001029.3-201ENST00000588063 SRRM2Q9UQ35 2752 aaKnown RBP1.1□□□□□ -2.23
AP001029.3-201ENST00000588063 HECTD1Q9ULT8 2610 aa1.1□□□□□ -2.23
AP001029.3-201ENST00000588063 NBEAL1Q6ZS30 2694 aa1.1□□□□□ -2.23
AP001029.3-201ENST00000588063 TENM3Q9P273 2699 aa1.1□□□□□ -2.23
AP001029.3-201ENST00000588063 KRTAP4-1Q9BYQ7 146 aa1.1□□□□□ -2.23
AP001029.3-201ENST00000588063 MUC3AQ02505 3323 aa1.1□□□□□ -2.23
AP001029.3-201ENST00000588063 NOTCH1P46531 2555 aa1.09□□□□□ -2.23
AP001029.3-201ENST00000588063 ASPMQ8IZT6 3477 aa1.09□□□□□ -2.23
AP001029.3-201ENST00000588063 PKD1L1Q8TDX9 2849 aa1.09□□□□□ -2.23
AP001029.3-201ENST00000588063 BSNQ9UPA5 3926 aa1.09□□□□□ -2.23
AP001029.3-201ENST00000588063 LAMA5O15230 3695 aa1.09□□□□□ -2.24
AP001029.3-201ENST00000588063 COL6A5A8TX70 2615 aa1.09□□□□□ -2.24
AP001029.3-201ENST00000588063 ANK3Q12955 4377 aaKnown RBP1.09□□□□□ -2.24
AP001029.3-201ENST00000588063 STAB1Q9NY15 2570 aa1.08□□□□□ -2.24
AP001029.3-201ENST00000588063 TENM4Q6N022 2769 aa1.08□□□□□ -2.24
AP001029.3-201ENST00000588063 SVEP1Q4LDE5 3571 aa1.08□□□□□ -2.24
AP001029.3-201ENST00000588063 SPENQ96T58 3664 aaKnown RBP1.08□□□□□ -2.24
AP001029.3-201ENST00000588063 HMCN1Q96RW7 5635 aa1.08□□□□□ -2.24
AP001029.3-201ENST00000588063 MGAM2Q2M2H8 2515 aa1.07□□□□□ -2.24
AP001029.3-201ENST00000588063 STAB2Q8WWQ8 2551 aa1.06□□□□□ -2.24
AP001029.3-201ENST00000588063 SMR3BP02814 79 aaPredicted RBP1.06□□□□□ -2.24
AP001029.3-201ENST00000588063 TGP01266 2768 aa1.05□□□□□ -2.24
AP001029.3-201ENST00000588063 AKAP9Q99996 3911 aa1.04□□□□□ -2.24
AP001029.3-201ENST00000588063 MEGF8Q7Z7M0 2845 aa1.03□□□□□ -2.24
AP001029.3-201ENST00000588063 VPS13DQ5THJ4 4388 aa1.03□□□□□ -2.25
AP001029.3-201ENST00000588063 CSMD2Q7Z408 3487 aa1.02□□□□□ -2.25
AP001029.3-201ENST00000588063 DNAH1Q9P2D7 4330 aa1.01□□□□□ -2.25
AP001029.3-201ENST00000588063 NBPF19A0A087WUL8 3843 aa1.01□□□□□ -2.25
AP001029.3-201ENST00000588063 FCGBPQ9Y6R7 5405 aaPredicted RBP1.01□□□□□ -2.25
AP001029.3-201ENST00000588063 COL7A1Q02388 2944 aa1.01□□□□□ -2.25
AP001029.3-201ENST00000588063 VPS13CQ709C8 3753 aa1.01□□□□□ -2.25
AP001029.3-201ENST00000588063 HUWE1Q7Z6Z7 4374 aaKnown RBP1.01□□□□□ -2.25
AP001029.3-201ENST00000588063 MYCBP2O75592 4640 aa1.01□□□□□ -2.25
AP001029.3-201ENST00000588063 DMBT1Q9UGM3 2413 aaPredicted RBP1□□□□□ -2.25
AP001029.3-201ENST00000588063 TNP1P09430 55 aa1□□□□□ -2.25
AP001029.3-201ENST00000588063 CUBNO60494 3623 aa1□□□□□ -2.25
AP001029.3-201ENST00000588063 FBN3Q75N90 2809 aa1□□□□□ -2.25
AP001029.3-201ENST00000588063 DNAH10Q8IVF4 4471 aa1□□□□□ -2.25
AP001029.3-201ENST00000588063 DNAH8Q96JB1 4490 aa1□□□□□ -2.25
AP001029.3-201ENST00000588063 DNAH17Q9UFH2 4485 aa0.99□□□□□ -2.25
AP001029.3-201ENST00000588063 DYNC2H1Q8NCM8 4307 aaKnown RBP0.97□□□□□ -2.25
AP001029.3-201ENST00000588063 DNAH9Q9NYC9 4486 aa0.97□□□□□ -2.25
AP001029.3-201ENST00000588063 TRRAPQ9Y4A5 3859 aa0.97□□□□□ -2.25
AP001029.3-201ENST00000588063 DNAH11Q96DT5 4516 aa0.97□□□□□ -2.25
AP001029.3-201ENST00000588063 ZNF469Q96JG9 3925 aaPredicted RBP0.96□□□□□ -2.26
AP001029.3-201ENST00000588063 DNAH3Q8TD57 4116 aa0.96□□□□□ -2.26
AP001029.3-201ENST00000588063 DNAH2Q9P225 4427 aa0.96□□□□□ -2.26
AP001029.3-201ENST00000588063 CSMD3Q7Z407 3707 aa0.94□□□□□ -2.26
AP001029.3-201ENST00000588063 LRP1BQ9NZR2 4599 aa0.94□□□□□ -2.26
AP001029.3-201ENST00000588063 FRAS1Q86XX4 4008 aa0.94□□□□□ -2.26
AP001029.3-201ENST00000588063 PLECQ15149 4684 aaKnown RBP0.92□□□□□ -2.26
AP001029.3-201ENST00000588063 MT1HL1P0DM35 61 aa0.92□□□□□ -2.26
AP001029.3-201ENST00000588063 SACSQ9NZJ4 4579 aa0.91□□□□□ -2.26
AP001029.3-201ENST00000588063 ANK2Q01484 3957 aa0.91□□□□□ -2.26
AP001029.3-201ENST00000588063 CMYA5Q8N3K9 4069 aa0.9□□□□□ -2.27
AP001029.3-201ENST00000588063 DNAH6Q9C0G6 4158 aa0.89□□□□□ -2.27
AP001029.3-201ENST00000588063 HECTD4Q9Y4D8 3996 aa0.88□□□□□ -2.27
AP001029.3-201ENST00000588063 KRTAP8-1Q8IUC2 63 aa0.88□□□□□ -2.27
AP001029.3-201ENST00000588063 STARD9Q9P2P6 4700 aa0.88□□□□□ -2.27
AP001029.3-201ENST00000588063 GPR98Q8WXG9 6306 aa0.88□□□□□ -2.27
AP001029.3-201ENST00000588063 PKD1P98161 4303 aa0.88□□□□□ -2.27
AP001029.3-201ENST00000588063 PRKDCP78527 4128 aaKnown RBP0.87□□□□□ -2.27
AP001029.3-201ENST00000588063 M0R2T5 61 aa0.87□□□□□ -2.27
AP001029.3-201ENST00000588063 APOBP04114 4563 aaKnown RBP0.87□□□□□ -2.27
AP001029.3-201ENST00000588063 DYNC1H1Q14204 4646 aaKnown RBP0.87□□□□□ -2.27
AP001029.3-201ENST00000588063 DNAH7Q8WXX0 4024 aa0.87□□□□□ -2.27
AP001029.3-201ENST00000588063 LYSTQ99698 3801 aa0.86□□□□□ -2.27
AP001029.3-201ENST00000588063 DNAH5Q8TE73 4624 aa0.86□□□□□ -2.27
AP001029.3-201ENST00000588063 KRTAP2-3P0C7H8 128 aa0.86□□□□□ -2.27
AP001029.3-201ENST00000588063 KRTAP2-4Q9BYR9 128 aa0.86□□□□□ -2.27
AP001029.3-201ENST00000588063 KRTAP2-1Q9BYU5 128 aa0.86□□□□□ -2.27
AP001029.3-201ENST00000588063 VPS13BQ7Z7G8 4022 aa0.86□□□□□ -2.27
AP001029.3-201ENST00000588063 FAT3Q8TDW7 4589 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms