RNA–Protein interactions for RNA: ENST00000587975.2

R3HDM4-203, Transcript of R3H domain containing 4, humanhuman

TSL 3 BASIC

Gene R3HDM4, Length 1,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-203ENST00000587975 XP32Q5T750 250 aa12.2□□□□□ -0.46
R3HDM4-203ENST00000587975 KRTAP17-1Q9BYP8 105 aa12.18□□□□□ -0.46
R3HDM4-203ENST00000587975 DMBT1Q9UGM3 2413 aaPredicted RBP12.07□□□□□ -0.48
R3HDM4-203ENST00000587975 KRTAP4-5Q9BYR2 181 aa12.07□□□□□ -0.48
R3HDM4-203ENST00000587975 A0A1B0GU33 70 aa11.97□□□□□ -0.49
R3HDM4-203ENST00000587975 TPRXLQ17RH7 258 aa11.97□□□□□ -0.49
R3HDM4-203ENST00000587975 H1FX-AS1Q4G0G2 97 aa11.95□□□□□ -0.5
R3HDM4-203ENST00000587975 ABCA13Q86UQ4 5058 aa11.95□□□□□ -0.5
R3HDM4-203ENST00000587975 H0YAA0 97 aa11.9□□□□□ -0.51
R3HDM4-203ENST00000587975 MYCBP2O75592 4640 aa11.89□□□□□ -0.51
R3HDM4-203ENST00000587975 KRTAP3-3Q9BYR6 98 aa11.87□□□□□ -0.51
R3HDM4-203ENST00000587975 PCLOQ9Y6V0 5065 aa11.85□□□□□ -0.51
R3HDM4-203ENST00000587975 S4R3F8 94 aa11.84□□□□□ -0.51
R3HDM4-203ENST00000587975 RBM12B-AS1Q9P1G2 102 aa11.72□□□□□ -0.53
R3HDM4-203ENST00000587975 KRTAP10-6P60371 365 aaPredicted RBP11.7□□□□□ -0.54
R3HDM4-203ENST00000587975 KRTAP3-2Q9BYR7 98 aa11.64□□□□□ -0.55
R3HDM4-203ENST00000587975 J3QL48 77 aa11.62□□□□□ -0.55
R3HDM4-203ENST00000587975 K7ERS5 55 aa11.59□□□□□ -0.55
R3HDM4-203ENST00000587975 ADM2Q7Z4H4 148 aa11.56□□□□□ -0.56
R3HDM4-203ENST00000587975 PRAC1Q96KF2 57 aa11.56□□□□□ -0.56
R3HDM4-203ENST00000587975 LRP2P98164 4655 aa11.56□□□□□ -0.56
R3HDM4-203ENST00000587975 SEC61BP60468 96 aaKnown RBP11.52□□□□□ -0.57
R3HDM4-203ENST00000587975 CSAG1Q6PB30 78 aa11.5□□□□□ -0.57
R3HDM4-203ENST00000587975 LPAP08519 4548 aa11.47□□□□□ -0.57
R3HDM4-203ENST00000587975 KRTAP13-4Q3LI77 160 aa11.44□□□□□ -0.58
R3HDM4-203ENST00000587975 P0C880 135 aa11.43□□□□□ -0.58
R3HDM4-203ENST00000587975 HERC1Q15751 4861 aa11.36□□□□□ -0.59
R3HDM4-203ENST00000587975 M0QZ58 72 aa11.28□□□□□ -0.6
R3HDM4-203ENST00000587975 A0A0D9SG42 100 aa11.26□□□□□ -0.61
R3HDM4-203ENST00000587975 MUC17Q685J3 4493 aa11.25□□□□□ -0.61
R3HDM4-203ENST00000587975 LINC01554Q52M75 96 aa11.23□□□□□ -0.61
R3HDM4-203ENST00000587975 ROMO1P60602 79 aa11.22□□□□□ -0.61
R3HDM4-203ENST00000587975 KRTAP25-1Q3LHN0 102 aa11.18□□□□□ -0.62
R3HDM4-203ENST00000587975 KRTAP4-1Q9BYQ7 146 aa11.16□□□□□ -0.62
R3HDM4-203ENST00000587975 HMCN2Q8NDA2 5059 aa11.11□□□□□ -0.63
R3HDM4-203ENST00000587975 KRTAP12-1P59990 96 aa11.08□□□□□ -0.64
R3HDM4-203ENST00000587975 KRTAP12-2P59991 146 aa11.07□□□□□ -0.64
R3HDM4-203ENST00000587975 KRTAP19-2Q3LHN2 52 aa11.05□□□□□ -0.64
R3HDM4-203ENST00000587975 SPINT4Q6UDR6 99 aa10.96□□□□□ -0.65
R3HDM4-203ENST00000587975 R4GN34 69 aa10.95□□□□□ -0.66
R3HDM4-203ENST00000587975 CRIPTQ9P021 101 aa10.82□□□□□ -0.68
R3HDM4-203ENST00000587975 FLGP20930 4061 aaPredicted RBP10.75□□□□□ -0.69
R3HDM4-203ENST00000587975 UBR4Q5T4S7 5183 aa10.73□□□□□ -0.69
R3HDM4-203ENST00000587975 LORP23490 312 aaPredicted RBP10.73□□□□□ -0.69
R3HDM4-203ENST00000587975 C10orf95Q9H7T3 257 aa10.59□□□□□ -0.71
R3HDM4-203ENST00000587975 RNF213Q63HN8 5207 aa10.5□□□□□ -0.73
R3HDM4-203ENST00000587975 MUC2Q02817 5179 aa10.49□□□□□ -0.73
R3HDM4-203ENST00000587975 LCE2CQ5TA81 110 aa10.47□□□□□ -0.73
R3HDM4-203ENST00000587975 CAMK2N1Q7Z7J9 78 aa10.33□□□□□ -0.76
R3HDM4-203ENST00000587975 MT1HP80294 61 aa10.2□□□□□ -0.78
R3HDM4-203ENST00000587975 SPRR2GQ9BYE4 73 aa10.2□□□□□ -0.78
R3HDM4-203ENST00000587975 PP632Q6XCG6 107 aa10.18□□□□□ -0.78
R3HDM4-203ENST00000587975 M0R2T5 61 aa10.13□□□□□ -0.79
R3HDM4-203ENST00000587975 KRTAP15-1Q3LI76 137 aa10.11□□□□□ -0.79
R3HDM4-203ENST00000587975 FAT4Q6V0I7 4981 aa10.06□□□□□ -0.8
R3HDM4-203ENST00000587975 KRTAP19-1Q8IUB9 90 aa10.06□□□□□ -0.8
R3HDM4-203ENST00000587975 KRTAP23-1A1A580 65 aa10.01□□□□□ -0.81
R3HDM4-203ENST00000587975 PLAC4Q8WY50 150 aa10□□□□□ -0.81
R3HDM4-203ENST00000587975 TNP1P09430 55 aa9.99□□□□□ -0.81
R3HDM4-203ENST00000587975 MT2AP02795 61 aa9.98□□□□□ -0.81
R3HDM4-203ENST00000587975 KRTAP9-8Q9BYQ0 159 aa9.94□□□□□ -0.82
R3HDM4-203ENST00000587975 MT1FP04733 61 aa9.93□□□□□ -0.82
R3HDM4-203ENST00000587975 KRTAP10-10P60014 251 aa9.91□□□□□ -0.82
R3HDM4-203ENST00000587975 LCE2AQ5TA79 106 aaPredicted RBP9.83□□□□□ -0.84
R3HDM4-203ENST00000587975 KRTAP19-8Q3LI54 63 aa9.82□□□□□ -0.84
R3HDM4-203ENST00000587975 H3BS24 57 aa9.67□□□□□ -0.86
R3HDM4-203ENST00000587975 NDUFAF8A1L188 74 aa9.61□□□□□ -0.87
R3HDM4-203ENST00000587975 MT1BP07438 61 aa9.58□□□□□ -0.88
R3HDM4-203ENST00000587975 KRTAP9-3Q9BYQ3 159 aa9.56□□□□□ -0.88
R3HDM4-203ENST00000587975 KRTAP10-5P60370 271 aa9.45□□□□□ -0.9
R3HDM4-203ENST00000587975 MT1XP80297 61 aa9.45□□□□□ -0.9
R3HDM4-203ENST00000587975 LCE3AQ5TA76 89 aa9.4□□□□□ -0.91
R3HDM4-203ENST00000587975 LUZP6Q538Z0 58 aa9.34□□□□□ -0.91
R3HDM4-203ENST00000587975 SPRR5A0A1B0GTR4 108 aa9.33□□□□□ -0.92
R3HDM4-203ENST00000587975 KRTAP8-1Q8IUC2 63 aa9.32□□□□□ -0.92
R3HDM4-203ENST00000587975 PRO2289Q9P1D8 64 aa9.28□□□□□ -0.92
R3HDM4-203ENST00000587975 KRTAP10-12P60413 245 aa9.2□□□□□ -0.94
R3HDM4-203ENST00000587975 KRTAP9-2Q9BYQ4 174 aa9.17□□□□□ -0.94
R3HDM4-203ENST00000587975 LCE2DQ5TA82 110 aaPredicted RBP9.16□□□□□ -0.94
R3HDM4-203ENST00000587975 LCE2BO14633 110 aa9.14□□□□□ -0.95
R3HDM4-203ENST00000587975 KRTAP10-7P60409 375 aaPredicted RBP9.09□□□□□ -0.95
R3HDM4-203ENST00000587975 KRTAP12-3P60328 96 aa9.02□□□□□ -0.97
R3HDM4-203ENST00000587975 FSIP2Q5CZC0 6907 aa8.88□□□□□ -0.99
R3HDM4-203ENST00000587975 USH2AO75445 5202 aa8.83□□□□□ -1
R3HDM4-203ENST00000587975 CRCT1Q9UGL9 99 aa8.74□□□□□ -1.01
R3HDM4-203ENST00000587975 KRTAP9-6A0A140TA67 174 aa8.69□□□□□ -1.02
R3HDM4-203ENST00000587975 KRTAP19-5Q3LI72 72 aa8.68□□□□□ -1.02
R3HDM4-203ENST00000587975 A0A0A0MQY5 61 aa8.66□□□□□ -1.02
R3HDM4-203ENST00000587975 SSPOA2VEC9 5147 aa8.64□□□□□ -1.03
R3HDM4-203ENST00000587975 KRTAP4-8A0A0G2JLE6 195 aa8.5□□□□□ -1.05
R3HDM4-203ENST00000587975 KRTAP4-8Q9BYQ9 185 aa8.5□□□□□ -1.05
R3HDM4-203ENST00000587975 LCE3CQ5T5A8 94 aa8.49□□□□□ -1.05
R3HDM4-203ENST00000587975 KRTAP19-6Q3LI70 58 aa8.48□□□□□ -1.05
R3HDM4-203ENST00000587975 KRTAP19-4Q3LI73 84 aa8.48□□□□□ -1.05
R3HDM4-203ENST00000587975 KRTAP19-7Q3SYF9 63 aa8.43□□□□□ -1.06
R3HDM4-203ENST00000587975 FCGBPQ9Y6R7 5405 aaPredicted RBP8.39□□□□□ -1.07
R3HDM4-203ENST00000587975 KMT2DO14686 5537 aa8.36□□□□□ -1.07
R3HDM4-203ENST00000587975 MT1EP04732 61 aa8.23□□□□□ -1.09
R3HDM4-203ENST00000587975 MT1LQ93083 61 aa8.18□□□□□ -1.1
R3HDM4-203ENST00000587975 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms