RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 RYR3Q15413 4870 aa6.89□□□□□ -1.31
DNMT1-207ENST00000586588 APOBP04114 4563 aaKnown RBP6.89□□□□□ -1.31
DNMT1-207ENST00000586588 KRTAP10-6P60371 365 aaPredicted RBP6.88□□□□□ -1.31
DNMT1-207ENST00000586588 KRTAP13-4Q3LI77 160 aa6.85□□□□□ -1.31
DNMT1-207ENST00000586588 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
DNMT1-207ENST00000586588 FAT1Q14517 4588 aa6.84□□□□□ -1.31
DNMT1-207ENST00000586588 A0A1B0GVY2 172 aa6.84□□□□□ -1.31
DNMT1-207ENST00000586588 C9orf92A6NGG3 77 aa6.82□□□□□ -1.32
DNMT1-207ENST00000586588 A0A0D9SG42 100 aa6.81□□□□□ -1.32
DNMT1-207ENST00000586588 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
DNMT1-207ENST00000586588 KRTAP3-3Q9BYR6 98 aa6.76□□□□□ -1.33
DNMT1-207ENST00000586588 S4R3F8 94 aa6.75□□□□□ -1.33
DNMT1-207ENST00000586588 SMR3BP02814 79 aaPredicted RBP6.71□□□□□ -1.34
DNMT1-207ENST00000586588 HSPG2P98160 4391 aa6.69□□□□□ -1.34
DNMT1-207ENST00000586588 KRTAP12-2P59991 146 aa6.68□□□□□ -1.34
DNMT1-207ENST00000586588 XP32Q5T750 250 aa6.67□□□□□ -1.34
DNMT1-207ENST00000586588 KRTAP10-4P60372 401 aaPredicted RBP6.67□□□□□ -1.34
DNMT1-207ENST00000586588 PKHD1L1Q86WI1 4243 aa6.64□□□□□ -1.35
DNMT1-207ENST00000586588 EPPK1P58107 5090 aaKnown RBP6.63□□□□□ -1.35
DNMT1-207ENST00000586588 KRTAP12-1P59990 96 aa6.62□□□□□ -1.35
DNMT1-207ENST00000586588 RYR1P21817 5038 aa6.62□□□□□ -1.35
DNMT1-207ENST00000586588 KIAA1109Q2LD37 5005 aa6.59□□□□□ -1.35
DNMT1-207ENST00000586588 DMBT1Q9UGM3 2413 aaPredicted RBP6.59□□□□□ -1.35
DNMT1-207ENST00000586588 KRTAP17-1Q9BYP8 105 aa6.59□□□□□ -1.35
DNMT1-207ENST00000586588 LRP1Q07954 4544 aaKnown RBP6.58□□□□□ -1.36
DNMT1-207ENST00000586588 TNXBP22105 4242 aa6.52□□□□□ -1.37
DNMT1-207ENST00000586588 LUZP6Q538Z0 58 aa6.51□□□□□ -1.37
DNMT1-207ENST00000586588 M0QZ58 72 aa6.49□□□□□ -1.37
DNMT1-207ENST00000586588 FAT3Q8TDW7 4589 aa6.48□□□□□ -1.37
DNMT1-207ENST00000586588 MYCBP2O75592 4640 aa6.47□□□□□ -1.37
DNMT1-207ENST00000586588 KRTAP10-8P60410 259 aa6.46□□□□□ -1.37
DNMT1-207ENST00000586588 Q5VSD8 79 aa6.46□□□□□ -1.38
DNMT1-207ENST00000586588 PLAC4Q8WY50 150 aa6.43□□□□□ -1.38
DNMT1-207ENST00000586588 KRTAP4-5Q9BYR2 181 aa6.31□□□□□ -1.4
DNMT1-207ENST00000586588 MT1HL1P0DM35 61 aa6.28□□□□□ -1.4
DNMT1-207ENST00000586588 ABCA13Q86UQ4 5058 aa6.28□□□□□ -1.4
DNMT1-207ENST00000586588 BIRC6Q9NR09 4857 aa6.24□□□□□ -1.41
DNMT1-207ENST00000586588 HERC2O95714 4834 aa6.21□□□□□ -1.41
DNMT1-207ENST00000586588 PP632Q6XCG6 107 aa6.2□□□□□ -1.42
DNMT1-207ENST00000586588 R4GN34 69 aa6.17□□□□□ -1.42
DNMT1-207ENST00000586588 LPAP08519 4548 aa6.14□□□□□ -1.43
DNMT1-207ENST00000586588 SEC61BP60468 96 aaKnown RBP6.14□□□□□ -1.43
DNMT1-207ENST00000586588 LRP2P98164 4655 aa6.1□□□□□ -1.43
DNMT1-207ENST00000586588 PCLOQ9Y6V0 5065 aa6.02□□□□□ -1.45
DNMT1-207ENST00000586588 SPRR5A0A1B0GTR4 108 aa5.96□□□□□ -1.45
DNMT1-207ENST00000586588 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
DNMT1-207ENST00000586588 HERC1Q15751 4861 aa5.95□□□□□ -1.46
DNMT1-207ENST00000586588 J3QL48 77 aa5.92□□□□□ -1.46
DNMT1-207ENST00000586588 CAMK2N1Q7Z7J9 78 aa5.9□□□□□ -1.46
DNMT1-207ENST00000586588 KRTAP23-1A1A580 65 aa5.9□□□□□ -1.46
DNMT1-207ENST00000586588 HMCN2Q8NDA2 5059 aa5.84□□□□□ -1.47
DNMT1-207ENST00000586588 MUC17Q685J3 4493 aa5.84□□□□□ -1.48
DNMT1-207ENST00000586588 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
DNMT1-207ENST00000586588 TNP1P09430 55 aa5.78□□□□□ -1.48
DNMT1-207ENST00000586588 KRTAP4-1Q9BYQ7 146 aa5.78□□□□□ -1.48
DNMT1-207ENST00000586588 MUC2Q02817 5179 aa5.77□□□□□ -1.49
DNMT1-207ENST00000586588 INE1O15225 51 aa5.66□□□□□ -1.5
DNMT1-207ENST00000586588 KRTAP19-2Q3LHN2 52 aa5.63□□□□□ -1.51
DNMT1-207ENST00000586588 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
DNMT1-207ENST00000586588 FAT4Q6V0I7 4981 aa5.55□□□□□ -1.52
DNMT1-207ENST00000586588 RNF213Q63HN8 5207 aa5.53□□□□□ -1.52
DNMT1-207ENST00000586588 FLGP20930 4061 aaPredicted RBP5.53□□□□□ -1.52
DNMT1-207ENST00000586588 LCE2CQ5TA81 110 aa5.43□□□□□ -1.54
DNMT1-207ENST00000586588 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
DNMT1-207ENST00000586588 KRTAP8-1Q8IUC2 63 aa5.31□□□□□ -1.56
DNMT1-207ENST00000586588 SPRR2GQ9BYE4 73 aa5.3□□□□□ -1.56
DNMT1-207ENST00000586588 MT1HP80294 61 aa5.28□□□□□ -1.56
DNMT1-207ENST00000586588 KRTAP19-1Q8IUB9 90 aa5.21□□□□□ -1.58
DNMT1-207ENST00000586588 M0R2T5 61 aa5.15□□□□□ -1.59
DNMT1-207ENST00000586588 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
DNMT1-207ENST00000586588 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
DNMT1-207ENST00000586588 KRTAP9-8Q9BYQ0 159 aa5.11□□□□□ -1.59
DNMT1-207ENST00000586588 MT2AP02795 61 aa5.1□□□□□ -1.59
DNMT1-207ENST00000586588 MT1FP04733 61 aa5.1□□□□□ -1.59
DNMT1-207ENST00000586588 KRTAP10-10P60014 251 aa5.02□□□□□ -1.61
DNMT1-207ENST00000586588 LCE2AQ5TA79 106 aaPredicted RBP4.99□□□□□ -1.61
DNMT1-207ENST00000586588 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
DNMT1-207ENST00000586588 KRTAP19-8Q3LI54 63 aa4.98□□□□□ -1.61
DNMT1-207ENST00000586588 MT1XP80297 61 aa4.95□□□□□ -1.62
DNMT1-207ENST00000586588 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
DNMT1-207ENST00000586588 MT1BP07438 61 aa4.87□□□□□ -1.63
DNMT1-207ENST00000586588 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
DNMT1-207ENST00000586588 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
DNMT1-207ENST00000586588 USH2AO75445 5202 aa4.81□□□□□ -1.64
DNMT1-207ENST00000586588 LCE2BO14633 110 aa4.8□□□□□ -1.64
DNMT1-207ENST00000586588 KRTAP2-3P0C7H8 128 aa4.78□□□□□ -1.64
DNMT1-207ENST00000586588 KRTAP2-4Q9BYR9 128 aa4.78□□□□□ -1.64
DNMT1-207ENST00000586588 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
DNMT1-207ENST00000586588 KRTAP19-5Q3LI72 72 aa4.72□□□□□ -1.65
DNMT1-207ENST00000586588 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
DNMT1-207ENST00000586588 KRTAP9-2Q9BYQ4 174 aa4.62□□□□□ -1.67
DNMT1-207ENST00000586588 FSIP2Q5CZC0 6907 aa4.59□□□□□ -1.67
DNMT1-207ENST00000586588 SSPOA2VEC9 5147 aa4.58□□□□□ -1.68
DNMT1-207ENST00000586588 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
DNMT1-207ENST00000586588 KRTAP9-6A0A140TA67 174 aa4.52□□□□□ -1.69
DNMT1-207ENST00000586588 KMT2DO14686 5537 aa4.51□□□□□ -1.69
DNMT1-207ENST00000586588 LCE2DQ5TA82 110 aaPredicted RBP4.47□□□□□ -1.69
DNMT1-207ENST00000586588 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
DNMT1-207ENST00000586588 KRTAP19-7Q3SYF9 63 aa4.41□□□□□ -1.7
DNMT1-207ENST00000586588 KRTAP4-8A0A0G2JLE6 195 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms