RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 LCA10Q71F78 164 aa6.99□□□□□ -1.29
SMARCD2-211ENST00000584483 COA5Q86WW8 74 aa6.99□□□□□ -1.29
SMARCD2-211ENST00000584483 MT1HP80294 61 aa6.98□□□□□ -1.29
SMARCD2-211ENST00000584483 S4R3F8 94 aa6.97□□□□□ -1.29
SMARCD2-211ENST00000584483 SERP1Q9Y6X1 66 aa6.91□□□□□ -1.3
SMARCD2-211ENST00000584483 CHKB-CPT1BH3BT56 60 aa6.88□□□□□ -1.31
SMARCD2-211ENST00000584483 LCE2AQ5TA79 106 aaPredicted RBP6.86□□□□□ -1.31
SMARCD2-211ENST00000584483 CSAG1Q6PB30 78 aa6.83□□□□□ -1.32
SMARCD2-211ENST00000584483 RPS28P62857 69 aaKnown RBP6.81□□□□□ -1.32
SMARCD2-211ENST00000584483 M0R2T5 61 aa6.79□□□□□ -1.32
SMARCD2-211ENST00000584483 SPTSSBQ8NFR3 76 aa6.76□□□□□ -1.33
SMARCD2-211ENST00000584483 KRTAP10-6P60371 365 aaPredicted RBP6.75□□□□□ -1.33
SMARCD2-211ENST00000584483 LORP23490 312 aaPredicted RBP6.72□□□□□ -1.33
SMARCD2-211ENST00000584483 KRTAP9-8Q9BYQ0 159 aa6.72□□□□□ -1.33
SMARCD2-211ENST00000584483 KRTAP3-2Q9BYR7 98 aa6.72□□□□□ -1.33
SMARCD2-211ENST00000584483 SMIM26A0A096LP01 95 aa6.69□□□□□ -1.34
SMARCD2-211ENST00000584483 H0YAA0 97 aa6.68□□□□□ -1.34
SMARCD2-211ENST00000584483 MT2AP02795 61 aa6.67□□□□□ -1.34
SMARCD2-211ENST00000584483 LINC01558Q9Y6Z2 57 aa6.67□□□□□ -1.34
SMARCD2-211ENST00000584483 ADM2Q7Z4H4 148 aa6.66□□□□□ -1.34
SMARCD2-211ENST00000584483 P0C880 135 aa6.65□□□□□ -1.34
SMARCD2-211ENST00000584483 MT1FP04733 61 aa6.63□□□□□ -1.35
SMARCD2-211ENST00000584483 Q1T7F1 81 aa6.63□□□□□ -1.35
SMARCD2-211ENST00000584483 A0A1B0GU69 56 aa6.57□□□□□ -1.36
SMARCD2-211ENST00000584483 KRTAP10-10P60014 251 aa6.54□□□□□ -1.36
SMARCD2-211ENST00000584483 PRR15LQ9BU68 103 aa6.54□□□□□ -1.36
SMARCD2-211ENST00000584483 V9GYY9 64 aa6.54□□□□□ -1.36
SMARCD2-211ENST00000584483 PSPHP1O15172 72 aa6.53□□□□□ -1.36
SMARCD2-211ENST00000584483 SEC61GP60059 68 aa6.53□□□□□ -1.36
SMARCD2-211ENST00000584483 Q5VV11 94 aa6.5□□□□□ -1.37
SMARCD2-211ENST00000584483 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
SMARCD2-211ENST00000584483 KRTAP9-3Q9BYQ3 159 aa6.49□□□□□ -1.37
SMARCD2-211ENST00000584483 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
SMARCD2-211ENST00000584483 A0A1B0GU33 70 aa6.45□□□□□ -1.38
SMARCD2-211ENST00000584483 SPATA8Q6RVD6 105 aa6.41□□□□□ -1.38
SMARCD2-211ENST00000584483 CRIPTQ9P021 101 aa6.41□□□□□ -1.38
SMARCD2-211ENST00000584483 M0QZ58 72 aa6.4□□□□□ -1.38
SMARCD2-211ENST00000584483 SPRR2GQ9BYE4 73 aa6.4□□□□□ -1.38
SMARCD2-211ENST00000584483 R4GN34 69 aa6.39□□□□□ -1.39
SMARCD2-211ENST00000584483 LCE2BO14633 110 aa6.35□□□□□ -1.39
SMARCD2-211ENST00000584483 UQCR11O14957 56 aa6.33□□□□□ -1.4
SMARCD2-211ENST00000584483 A8MU10 97 aa6.31□□□□□ -1.4
SMARCD2-211ENST00000584483 KRTAP19-8Q3LI54 63 aa6.29□□□□□ -1.4
SMARCD2-211ENST00000584483 LINC01554Q52M75 96 aa6.29□□□□□ -1.4
SMARCD2-211ENST00000584483 A0A0D9SG42 100 aa6.27□□□□□ -1.41
SMARCD2-211ENST00000584483 A6NED7 52 aa6.27□□□□□ -1.41
SMARCD2-211ENST00000584483 MIR22HGQ0VDD5 57 aa6.27□□□□□ -1.41
SMARCD2-211ENST00000584483 LCE2DQ5TA82 110 aaPredicted RBP6.27□□□□□ -1.41
SMARCD2-211ENST00000584483 MT1BP07438 61 aa6.25□□□□□ -1.41
SMARCD2-211ENST00000584483 USH2AO75445 5202 aa6.2□□□□□ -1.42
SMARCD2-211ENST00000584483 KRTAP12-1P59990 96 aa6.19□□□□□ -1.42
SMARCD2-211ENST00000584483 A6NN06 94 aa6.17□□□□□ -1.42
SMARCD2-211ENST00000584483 KRTAP12-2P59991 146 aa6.16□□□□□ -1.42
SMARCD2-211ENST00000584483 CDC42SE1Q9NRR8 79 aa6.16□□□□□ -1.42
SMARCD2-211ENST00000584483 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
SMARCD2-211ENST00000584483 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
SMARCD2-211ENST00000584483 PLAC4Q8WY50 150 aa6.08□□□□□ -1.44
SMARCD2-211ENST00000584483 BRK1Q8WUW1 75 aa6.07□□□□□ -1.44
SMARCD2-211ENST00000584483 SSPOA2VEC9 5147 aa6.02□□□□□ -1.45
SMARCD2-211ENST00000584483 MT1XP80297 61 aa5.99□□□□□ -1.45
SMARCD2-211ENST00000584483 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
SMARCD2-211ENST00000584483 KRTAP19-6Q3LI70 58 aa5.96□□□□□ -1.46
SMARCD2-211ENST00000584483 CAMK2N1Q7Z7J9 78 aa5.94□□□□□ -1.46
SMARCD2-211ENST00000584483 K7ERS5 55 aa5.91□□□□□ -1.46
SMARCD2-211ENST00000584483 C10orf95Q9H7T3 257 aa5.89□□□□□ -1.47
SMARCD2-211ENST00000584483 FSIP2Q5CZC0 6907 aa5.88□□□□□ -1.47
SMARCD2-211ENST00000584483 CRCT1Q9UGL9 99 aa5.87□□□□□ -1.47
SMARCD2-211ENST00000584483 PRO0628Q9UI54 55 aa5.84□□□□□ -1.47
SMARCD2-211ENST00000584483 PRO2289Q9P1D8 64 aa5.81□□□□□ -1.48
SMARCD2-211ENST00000584483 FCGBPQ9Y6R7 5405 aaPredicted RBP5.81□□□□□ -1.48
SMARCD2-211ENST00000584483 KRTAP10-7P60409 375 aaPredicted RBP5.75□□□□□ -1.49
SMARCD2-211ENST00000584483 ROMO1P60602 79 aa5.73□□□□□ -1.49
SMARCD2-211ENST00000584483 PMAIP1Q13794 54 aa5.73□□□□□ -1.49
SMARCD2-211ENST00000584483 KRTAP9-6A0A140TA67 174 aa5.7□□□□□ -1.5
SMARCD2-211ENST00000584483 KRTAP10-12P60413 245 aa5.67□□□□□ -1.5
SMARCD2-211ENST00000584483 TNP1P09430 55 aa5.64□□□□□ -1.51
SMARCD2-211ENST00000584483 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
SMARCD2-211ENST00000584483 KRTAP4-8A0A0G2JLE6 195 aa5.6□□□□□ -1.51
SMARCD2-211ENST00000584483 KRTAP4-8Q9BYQ9 185 aa5.6□□□□□ -1.51
SMARCD2-211ENST00000584483 KMT2DO14686 5537 aa5.53□□□□□ -1.52
SMARCD2-211ENST00000584483 LCE3AQ5TA76 89 aa5.53□□□□□ -1.52
SMARCD2-211ENST00000584483 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
SMARCD2-211ENST00000584483 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.45□□□□□ -1.54
SMARCD2-211ENST00000584483 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
SMARCD2-211ENST00000584483 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
SMARCD2-211ENST00000584483 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
SMARCD2-211ENST00000584483 KRTAP8-1Q8IUC2 63 aa5.39□□□□□ -1.55
SMARCD2-211ENST00000584483 SVIPQ8NHG7 77 aa5.38□□□□□ -1.55
SMARCD2-211ENST00000584483 KRTAP19-5Q3LI72 72 aa5.36□□□□□ -1.55
SMARCD2-211ENST00000584483 KRTAP19-7Q3SYF9 63 aa5.36□□□□□ -1.55
SMARCD2-211ENST00000584483 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
SMARCD2-211ENST00000584483 KRTAP5-9P26371 169 aa5.28□□□□□ -1.56
SMARCD2-211ENST00000584483 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
SMARCD2-211ENST00000584483 MT1EP04732 61 aa5.26□□□□□ -1.57
SMARCD2-211ENST00000584483 KRTAP6-3Q3LI67 103 aa5.26□□□□□ -1.57
SMARCD2-211ENST00000584483 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
SMARCD2-211ENST00000584483 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
SMARCD2-211ENST00000584483 KRTAP9-7A8MTY7 169 aa5.2□□□□□ -1.58
SMARCD2-211ENST00000584483 MUC12Q9UKN1 5478 aa5.18□□□□□ -1.58
SMARCD2-211ENST00000584483 MT1LQ93083 61 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms