RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 RPS28P62857 69 aaKnown RBP6.47□□□□□ -1.37
SRSF1-204ENST00000581979 COA5Q86WW8 74 aa6.45□□□□□ -1.38
SRSF1-204ENST00000581979 A8MUN3 132 aa6.43□□□□□ -1.38
SRSF1-204ENST00000581979 COX6B2Q6YFQ2 88 aa6.43□□□□□ -1.38
SRSF1-204ENST00000581979 KRTAP9-6A0A140TA67 174 aa6.42□□□□□ -1.38
SRSF1-204ENST00000581979 MT1HP80294 61 aa6.41□□□□□ -1.38
SRSF1-204ENST00000581979 CHKB-CPT1BH3BT56 60 aa6.39□□□□□ -1.39
SRSF1-204ENST00000581979 KRTAP3-1Q9BYR8 98 aa6.39□□□□□ -1.39
SRSF1-204ENST00000581979 RBM12B-AS1Q9P1G2 102 aa6.38□□□□□ -1.39
SRSF1-204ENST00000581979 MPLKIPQ8TAP9 179 aa6.35□□□□□ -1.39
SRSF1-204ENST00000581979 SMIM26A0A096LP01 95 aa6.34□□□□□ -1.39
SRSF1-204ENST00000581979 KRTAP10-6P60371 365 aaPredicted RBP6.29□□□□□ -1.4
SRSF1-204ENST00000581979 H1FX-AS1Q4G0G2 97 aa6.28□□□□□ -1.4
SRSF1-204ENST00000581979 SVIPQ8NHG7 77 aa6.27□□□□□ -1.41
SRSF1-204ENST00000581979 SPTSSBQ8NFR3 76 aa6.26□□□□□ -1.41
SRSF1-204ENST00000581979 FLGP20930 4061 aaPredicted RBP6.26□□□□□ -1.41
SRSF1-204ENST00000581979 CRCT1Q9UGL9 99 aa6.25□□□□□ -1.41
SRSF1-204ENST00000581979 S4R3F8 94 aa6.25□□□□□ -1.41
SRSF1-204ENST00000581979 M0R2T5 61 aa6.25□□□□□ -1.41
SRSF1-204ENST00000581979 FSIP2Q5CZC0 6907 aa6.24□□□□□ -1.41
SRSF1-204ENST00000581979 LCA10Q71F78 164 aa6.22□□□□□ -1.41
SRSF1-204ENST00000581979 Q1T7F1 81 aa6.22□□□□□ -1.41
SRSF1-204ENST00000581979 V9GYY9 64 aa6.22□□□□□ -1.41
SRSF1-204ENST00000581979 LINC01558Q9Y6Z2 57 aa6.18□□□□□ -1.42
SRSF1-204ENST00000581979 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
SRSF1-204ENST00000581979 KRTAP4-6Q9BYQ5 205 aa6.16□□□□□ -1.42
SRSF1-204ENST00000581979 PRR15LQ9BU68 103 aa6.13□□□□□ -1.43
SRSF1-204ENST00000581979 PSPHP1O15172 72 aa6.13□□□□□ -1.43
SRSF1-204ENST00000581979 A0A1B0GU69 56 aa6.11□□□□□ -1.43
SRSF1-204ENST00000581979 CSAG1Q6PB30 78 aa6.11□□□□□ -1.43
SRSF1-204ENST00000581979 SEC61GP60059 68 aa6.1□□□□□ -1.43
SRSF1-204ENST00000581979 KRTAP9-8Q9BYQ0 159 aa6.06□□□□□ -1.44
SRSF1-204ENST00000581979 Q5VV11 94 aa6.05□□□□□ -1.44
SRSF1-204ENST00000581979 ADM2Q7Z4H4 148 aa5.97□□□□□ -1.45
SRSF1-204ENST00000581979 MT2AP02795 61 aa5.96□□□□□ -1.46
SRSF1-204ENST00000581979 A6NED7 52 aa5.95□□□□□ -1.46
SRSF1-204ENST00000581979 H0YAA0 97 aa5.94□□□□□ -1.46
SRSF1-204ENST00000581979 A0A1B0GU33 70 aa5.92□□□□□ -1.46
SRSF1-204ENST00000581979 USH2AO75445 5202 aa5.92□□□□□ -1.46
SRSF1-204ENST00000581979 UQCR11O14957 56 aa5.91□□□□□ -1.46
SRSF1-204ENST00000581979 MT1FP04733 61 aa5.91□□□□□ -1.46
SRSF1-204ENST00000581979 P0C880 135 aa5.91□□□□□ -1.46
SRSF1-204ENST00000581979 KRTAP9-3Q9BYQ3 159 aa5.88□□□□□ -1.47
SRSF1-204ENST00000581979 SSPOA2VEC9 5147 aa5.87□□□□□ -1.47
SRSF1-204ENST00000581979 BRK1Q8WUW1 75 aa5.87□□□□□ -1.47
SRSF1-204ENST00000581979 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
SRSF1-204ENST00000581979 MIR22HGQ0VDD5 57 aa5.85□□□□□ -1.47
SRSF1-204ENST00000581979 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.83□□□□□ -1.48
SRSF1-204ENST00000581979 SPATA8Q6RVD6 105 aa5.82□□□□□ -1.48
SRSF1-204ENST00000581979 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
SRSF1-204ENST00000581979 A8MU10 97 aa5.78□□□□□ -1.48
SRSF1-204ENST00000581979 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
SRSF1-204ENST00000581979 KRTAP9-7A8MTY7 169 aa5.77□□□□□ -1.49
SRSF1-204ENST00000581979 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
SRSF1-204ENST00000581979 M0QZ58 72 aa5.77□□□□□ -1.49
SRSF1-204ENST00000581979 R4GN34 69 aa5.77□□□□□ -1.49
SRSF1-204ENST00000581979 FCGBPQ9Y6R7 5405 aaPredicted RBP5.76□□□□□ -1.49
SRSF1-204ENST00000581979 A0A0D9SG42 100 aa5.71□□□□□ -1.49
SRSF1-204ENST00000581979 CRIPTQ9P021 101 aa5.71□□□□□ -1.5
SRSF1-204ENST00000581979 PRO0628Q9UI54 55 aa5.71□□□□□ -1.5
SRSF1-204ENST00000581979 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
SRSF1-204ENST00000581979 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
SRSF1-204ENST00000581979 LINC01554Q52M75 96 aa5.67□□□□□ -1.5
SRSF1-204ENST00000581979 K7ERS5 55 aa5.61□□□□□ -1.51
SRSF1-204ENST00000581979 SPINT4Q6UDR6 99 aa5.59□□□□□ -1.51
SRSF1-204ENST00000581979 SPRR2GQ9BYE4 73 aa5.57□□□□□ -1.52
SRSF1-204ENST00000581979 MACF1Q9UPN3 7388 aaKnown RBP5.56□□□□□ -1.52
SRSF1-204ENST00000581979 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
SRSF1-204ENST00000581979 KRTAP12-2P59991 146 aa5.56□□□□□ -1.52
SRSF1-204ENST00000581979 PMAIP1Q13794 54 aa5.54□□□□□ -1.52
SRSF1-204ENST00000581979 A6NN06 94 aa5.51□□□□□ -1.53
SRSF1-204ENST00000581979 SYNE2Q8WXH0 6885 aaKnown RBP5.51□□□□□ -1.53
SRSF1-204ENST00000581979 KRTAP4-12Q9BQ66 201 aa5.46□□□□□ -1.54
SRSF1-204ENST00000581979 KRTAP6-3Q3LI67 103 aa5.43□□□□□ -1.54
SRSF1-204ENST00000581979 LCE3BQ5TA77 95 aa5.43□□□□□ -1.54
SRSF1-204ENST00000581979 PLAC4Q8WY50 150 aa5.43□□□□□ -1.54
SRSF1-204ENST00000581979 KRTAP19-8Q3LI54 63 aa5.43□□□□□ -1.54
SRSF1-204ENST00000581979 MT1BP07438 61 aa5.41□□□□□ -1.54
SRSF1-204ENST00000581979 CAMK2N1Q7Z7J9 78 aa5.41□□□□□ -1.54
SRSF1-204ENST00000581979 ROMO1P60602 79 aa5.35□□□□□ -1.55
SRSF1-204ENST00000581979 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
SRSF1-204ENST00000581979 KTN1-AS1Q86SY8 53 aa5.29□□□□□ -1.56
SRSF1-204ENST00000581979 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
SRSF1-204ENST00000581979 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
SRSF1-204ENST00000581979 C10orf95Q9H7T3 257 aa5.27□□□□□ -1.57
SRSF1-204ENST00000581979 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
SRSF1-204ENST00000581979 PRAC1Q96KF2 57 aa5.2□□□□□ -1.58
SRSF1-204ENST00000581979 NEBP20929 6669 aa5.19□□□□□ -1.58
SRSF1-204ENST00000581979 MUC12Q9UKN1 5478 aa5.18□□□□□ -1.58
SRSF1-204ENST00000581979 KRTAP5-9P26371 169 aa5.17□□□□□ -1.58
SRSF1-204ENST00000581979 MT1XP80297 61 aa5.17□□□□□ -1.58
SRSF1-204ENST00000581979 PRO2289Q9P1D8 64 aa5.16□□□□□ -1.58
SRSF1-204ENST00000581979 TNP1P09430 55 aa5.13□□□□□ -1.59
SRSF1-204ENST00000581979 KRTAP25-1Q3LHN0 102 aa5.13□□□□□ -1.59
SRSF1-204ENST00000581979 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
SRSF1-204ENST00000581979 H3BS24 57 aa5.1□□□□□ -1.59
SRSF1-204ENST00000581979 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
SRSF1-204ENST00000581979 KMT2DO14686 5537 aa5.09□□□□□ -1.6
SRSF1-204ENST00000581979 KRTAP20-1Q3LI63 56 aa5.05□□□□□ -1.6
SRSF1-204ENST00000581979 MDN1Q9NU22 5596 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 552.9 ms