RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 KRTAP11-1Q8IUC1 163 aa2.54□□□□□ -2
RTTN-206ENST00000581161 KRTAP1-5Q9BYS1 174 aa2.54□□□□□ -2
RTTN-206ENST00000581161 COL6A5A8TX70 2615 aa2.54□□□□□ -2
RTTN-206ENST00000581161 TNXBP22105 4242 aa2.54□□□□□ -2
RTTN-206ENST00000581161 EPPK1P58107 5090 aaKnown RBP2.53□□□□□ -2
RTTN-206ENST00000581161 PRO2289Q9P1D8 64 aa2.53□□□□□ -2
RTTN-206ENST00000581161 KIAA1109Q2LD37 5005 aa2.53□□□□□ -2
RTTN-206ENST00000581161 A8MUU9 505 aa2.52□□□□□ -2.01
RTTN-206ENST00000581161 KRTAP23-1A1A580 65 aa2.52□□□□□ -2.01
RTTN-206ENST00000581161 PANO1I0J062 215 aa2.51□□□□□ -2.01
RTTN-206ENST00000581161 PLAC8Q9NZF1 115 aa2.51□□□□□ -2.01
RTTN-206ENST00000581161 LRP1Q07954 4544 aaKnown RBP2.49□□□□□ -2.01
RTTN-206ENST00000581161 FAT1Q14517 4588 aa2.49□□□□□ -2.01
RTTN-206ENST00000581161 KRTAP21-3Q3LHN1 58 aa2.49□□□□□ -2.01
RTTN-206ENST00000581161 A6NN06 94 aa2.48□□□□□ -2.01
RTTN-206ENST00000581161 MGAM2Q2M2H8 2515 aa2.48□□□□□ -2.01
RTTN-206ENST00000581161 PCLOQ9Y6V0 5065 aa2.48□□□□□ -2.01
RTTN-206ENST00000581161 KRTAP25-1Q3LHN0 102 aa2.47□□□□□ -2.01
RTTN-206ENST00000581161 KRTAP10-8P60410 259 aa2.47□□□□□ -2.01
RTTN-206ENST00000581161 BIRC6Q9NR09 4857 aa2.46□□□□□ -2.02
RTTN-206ENST00000581161 KRTAP13-1Q8IUC0 172 aa2.45□□□□□ -2.02
RTTN-206ENST00000581161 HERC2O95714 4834 aa2.42□□□□□ -2.02
RTTN-206ENST00000581161 Q6ZRN7 208 aaPredicted RBP2.41□□□□□ -2.02
RTTN-206ENST00000581161 RPS29P62273 56 aaKnown RBP2.4□□□□□ -2.02
RTTN-206ENST00000581161 HMCN2Q8NDA2 5059 aa2.39□□□□□ -2.03
RTTN-206ENST00000581161 KRTAP13-3Q3SY46 172 aa2.39□□□□□ -2.03
RTTN-206ENST00000581161 KRTAP19-4Q3LI73 84 aa2.37□□□□□ -2.03
RTTN-206ENST00000581161 MYCBP2O75592 4640 aa2.37□□□□□ -2.03
RTTN-206ENST00000581161 A0A1B0GVY2 172 aa2.36□□□□□ -2.03
RTTN-206ENST00000581161 KRTAP10-1P60331 282 aa2.36□□□□□ -2.03
RTTN-206ENST00000581161 LCE2DQ5TA82 110 aaPredicted RBP2.36□□□□□ -2.03
RTTN-206ENST00000581161 KRTAP10-10P60014 251 aa2.35□□□□□ -2.03
RTTN-206ENST00000581161 KRTAP13-2Q52LG2 175 aa2.34□□□□□ -2.03
RTTN-206ENST00000581161 KRTAP10-2P60368 255 aa2.34□□□□□ -2.04
RTTN-206ENST00000581161 KRTAP10-4P60372 401 aaPredicted RBP2.33□□□□□ -2.04
RTTN-206ENST00000581161 FLG2Q5D862 2391 aaPredicted RBP2.32□□□□□ -2.04
RTTN-206ENST00000581161 INE1O15225 51 aa2.31□□□□□ -2.04
RTTN-206ENST00000581161 KRTAP17-1Q9BYP8 105 aa2.29□□□□□ -2.04
RTTN-206ENST00000581161 LRP2P98164 4655 aa2.29□□□□□ -2.04
RTTN-206ENST00000581161 MUC17Q685J3 4493 aa2.28□□□□□ -2.04
RTTN-206ENST00000581161 LPAP08519 4548 aa2.28□□□□□ -2.04
RTTN-206ENST00000581161 UBR4Q5T4S7 5183 aa2.28□□□□□ -2.04
RTTN-206ENST00000581161 HERC1Q15751 4861 aa2.27□□□□□ -2.05
RTTN-206ENST00000581161 KRTAP1-4P0C5Y4 121 aa2.27□□□□□ -2.05
RTTN-206ENST00000581161 H0YAA0 97 aa2.26□□□□□ -2.05
RTTN-206ENST00000581161 KRTAP10-6P60371 365 aaPredicted RBP2.25□□□□□ -2.05
RTTN-206ENST00000581161 MT3P25713 68 aa2.22□□□□□ -2.05
RTTN-206ENST00000581161 MUC2Q02817 5179 aa2.22□□□□□ -2.05
RTTN-206ENST00000581161 KRTAP19-2Q3LHN2 52 aa2.22□□□□□ -2.05
RTTN-206ENST00000581161 KRTAP12-2P59991 146 aa2.21□□□□□ -2.05
RTTN-206ENST00000581161 RNF213Q63HN8 5207 aa2.21□□□□□ -2.06
RTTN-206ENST00000581161 CRCT1Q9UGL9 99 aa2.21□□□□□ -2.06
RTTN-206ENST00000581161 KRTAP15-1Q3LI76 137 aa2.2□□□□□ -2.06
RTTN-206ENST00000581161 KRTAP3-1Q9BYR8 98 aa2.2□□□□□ -2.06
RTTN-206ENST00000581161 FLGP20930 4061 aaPredicted RBP2.19□□□□□ -2.06
RTTN-206ENST00000581161 FAT4Q6V0I7 4981 aa2.18□□□□□ -2.06
RTTN-206ENST00000581161 TPRXLQ17RH7 258 aa2.17□□□□□ -2.06
RTTN-206ENST00000581161 XP32Q5T750 250 aa2.15□□□□□ -2.07
RTTN-206ENST00000581161 KRTAP13-4Q3LI77 160 aa2.13□□□□□ -2.07
RTTN-206ENST00000581161 KRTAP10-7P60409 375 aaPredicted RBP2.13□□□□□ -2.07
RTTN-206ENST00000581161 DMBT1Q9UGM3 2413 aaPredicted RBP2.08□□□□□ -2.08
RTTN-206ENST00000581161 KRTAP3-3Q9BYR6 98 aa2.07□□□□□ -2.08
RTTN-206ENST00000581161 KRTAP3-2Q9BYR7 98 aa2.07□□□□□ -2.08
RTTN-206ENST00000581161 KRTAP12-1P59990 96 aa2.03□□□□□ -2.08
RTTN-206ENST00000581161 MT1HL1P0DM35 61 aa2.02□□□□□ -2.09
RTTN-206ENST00000581161 KRTAP10-5P60370 271 aa1.97□□□□□ -2.09
RTTN-206ENST00000581161 KRTAP10-12P60413 245 aa1.97□□□□□ -2.09
RTTN-206ENST00000581161 USH2AO75445 5202 aa1.94□□□□□ -2.1
RTTN-206ENST00000581161 KRTAP4-5Q9BYR2 181 aa1.93□□□□□ -2.1
RTTN-206ENST00000581161 LORP23490 312 aaPredicted RBP1.92□□□□□ -2.1
RTTN-206ENST00000581161 SSPOA2VEC9 5147 aa1.91□□□□□ -2.1
RTTN-206ENST00000581161 LCE2CQ5TA81 110 aa1.91□□□□□ -2.1
RTTN-206ENST00000581161 KRTAP8-1Q8IUC2 63 aa1.9□□□□□ -2.11
RTTN-206ENST00000581161 LCE2AQ5TA79 106 aaPredicted RBP1.88□□□□□ -2.11
RTTN-206ENST00000581161 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
RTTN-206ENST00000581161 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
RTTN-206ENST00000581161 LCE2BO14633 110 aa1.84□□□□□ -2.11
RTTN-206ENST00000581161 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
RTTN-206ENST00000581161 KRTAP19-1Q8IUB9 90 aa1.76□□□□□ -2.13
RTTN-206ENST00000581161 LCE3AQ5TA76 89 aa1.75□□□□□ -2.13
RTTN-206ENST00000581161 KMT2DO14686 5537 aa1.71□□□□□ -2.14
RTTN-206ENST00000581161 KRTAP9-8Q9BYQ0 159 aa1.71□□□□□ -2.14
RTTN-206ENST00000581161 SPRR2FQ96RM1 72 aa1.71□□□□□ -2.14
RTTN-206ENST00000581161 SPRR2EP22531 72 aa1.69□□□□□ -2.14
RTTN-206ENST00000581161 SPRR2BP35325 72 aa1.69□□□□□ -2.14
RTTN-206ENST00000581161 SPRR2AP35326 72 aa1.69□□□□□ -2.14
RTTN-206ENST00000581161 KRTAP19-8Q3LI54 63 aa1.69□□□□□ -2.14
RTTN-206ENST00000581161 MT1HP80294 61 aa1.68□□□□□ -2.14
RTTN-206ENST00000581161 SPRR2GQ9BYE4 73 aa1.68□□□□□ -2.14
RTTN-206ENST00000581161 KRTAP12-4P60329 112 aa1.67□□□□□ -2.14
RTTN-206ENST00000581161 SPRR2DP22532 72 aa1.66□□□□□ -2.14
RTTN-206ENST00000581161 MT2AP02795 61 aa1.64□□□□□ -2.15
RTTN-206ENST00000581161 MT1FP04733 61 aa1.64□□□□□ -2.15
RTTN-206ENST00000581161 MT1BP07438 61 aa1.64□□□□□ -2.15
RTTN-206ENST00000581161 FCGBPQ9Y6R7 5405 aaPredicted RBP1.63□□□□□ -2.15
RTTN-206ENST00000581161 KRTAP9-3Q9BYQ3 159 aa1.63□□□□□ -2.15
RTTN-206ENST00000581161 LCE3CQ5T5A8 94 aa1.61□□□□□ -2.15
RTTN-206ENST00000581161 LOC100996750A0A140TA64 210 aa1.6□□□□□ -2.15
RTTN-206ENST00000581161 KRTAP4-6Q9BYQ5 205 aa1.6□□□□□ -2.15
RTTN-206ENST00000581161 MUC12Q9UKN1 5478 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms