RNA–Protein interactions for RNA: ENST00000581031.5

RHOT1-209, Transcript of ras homolog family member T1, humanhuman

TSL 1 (best)

Gene RHOT1, Length 3,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-209ENST00000581031 RPL37P61927 97 aaKnown RBP9.74□□□□□ -0.85
RHOT1-209ENST00000581031 CDC42SE1Q9NRR8 79 aa9.71□□□□□ -0.85
RHOT1-209ENST00000581031 HERC1Q15751 4861 aa9.69□□□□□ -0.86
RHOT1-209ENST00000581031 COX6B2Q6YFQ2 88 aa9.68□□□□□ -0.86
RHOT1-209ENST00000581031 SEC61GP60059 68 aa9.65□□□□□ -0.86
RHOT1-209ENST00000581031 J3QL48 77 aa9.61□□□□□ -0.87
RHOT1-209ENST00000581031 MIR22HGQ0VDD5 57 aa9.61□□□□□ -0.87
RHOT1-209ENST00000581031 PCLOQ9Y6V0 5065 aa9.6□□□□□ -0.87
RHOT1-209ENST00000581031 SPATA8Q6RVD6 105 aa9.6□□□□□ -0.87
RHOT1-209ENST00000581031 UQCR11O14957 56 aa9.59□□□□□ -0.87
RHOT1-209ENST00000581031 KRTAP3-3Q9BYR6 98 aa9.49□□□□□ -0.89
RHOT1-209ENST00000581031 A0A1B0GU33 70 aa9.46□□□□□ -0.89
RHOT1-209ENST00000581031 A6NN06 94 aa9.46□□□□□ -0.89
RHOT1-209ENST00000581031 H0YAA0 97 aa9.46□□□□□ -0.89
RHOT1-209ENST00000581031 ADM2Q7Z4H4 148 aa9.46□□□□□ -0.9
RHOT1-209ENST00000581031 BIRC6Q9NR09 4857 aa9.45□□□□□ -0.9
RHOT1-209ENST00000581031 S4R3F8 94 aa9.45□□□□□ -0.9
RHOT1-209ENST00000581031 TPRXLQ17RH7 258 aa9.44□□□□□ -0.9
RHOT1-209ENST00000581031 A0A0D9SG42 100 aa9.42□□□□□ -0.9
RHOT1-209ENST00000581031 PRAC1Q96KF2 57 aa9.41□□□□□ -0.9
RHOT1-209ENST00000581031 RNF213Q63HN8 5207 aa9.36□□□□□ -0.91
RHOT1-209ENST00000581031 H1FX-AS1Q4G0G2 97 aa9.36□□□□□ -0.91
RHOT1-209ENST00000581031 P0C880 135 aa9.36□□□□□ -0.91
RHOT1-209ENST00000581031 KRTAP4-1Q9BYQ7 146 aa9.34□□□□□ -0.91
RHOT1-209ENST00000581031 FAT4Q6V0I7 4981 aa9.31□□□□□ -0.92
RHOT1-209ENST00000581031 KRTAP13-4Q3LI77 160 aa9.3□□□□□ -0.92
RHOT1-209ENST00000581031 KTN1-AS1Q86SY8 53 aa9.29□□□□□ -0.92
RHOT1-209ENST00000581031 KRTAP10-6P60371 365 aaPredicted RBP9.29□□□□□ -0.92
RHOT1-209ENST00000581031 RBM12B-AS1Q9P1G2 102 aa9.29□□□□□ -0.92
RHOT1-209ENST00000581031 MUC17Q685J3 4493 aa9.27□□□□□ -0.93
RHOT1-209ENST00000581031 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
RHOT1-209ENST00000581031 CRIPTQ9P021 101 aa9.23□□□□□ -0.93
RHOT1-209ENST00000581031 UBR4Q5T4S7 5183 aa9.19□□□□□ -0.94
RHOT1-209ENST00000581031 SEC61BP60468 96 aaKnown RBP9.15□□□□□ -0.94
RHOT1-209ENST00000581031 CSAG1Q6PB30 78 aa9.15□□□□□ -0.95
RHOT1-209ENST00000581031 LINC01554Q52M75 96 aa9.13□□□□□ -0.95
RHOT1-209ENST00000581031 HMCN2Q8NDA2 5059 aa9.13□□□□□ -0.95
RHOT1-209ENST00000581031 SPINT4Q6UDR6 99 aa9.05□□□□□ -0.96
RHOT1-209ENST00000581031 LORP23490 312 aaPredicted RBP8.99□□□□□ -0.97
RHOT1-209ENST00000581031 K7ERS5 55 aa8.95□□□□□ -0.98
RHOT1-209ENST00000581031 KRTAP12-2P59991 146 aa8.95□□□□□ -0.98
RHOT1-209ENST00000581031 M0QZ58 72 aa8.91□□□□□ -0.98
RHOT1-209ENST00000581031 R4GN34 69 aa8.86□□□□□ -0.99
RHOT1-209ENST00000581031 KRTAP19-2Q3LHN2 52 aa8.83□□□□□ -1
RHOT1-209ENST00000581031 FLGP20930 4061 aaPredicted RBP8.8□□□□□ -1
RHOT1-209ENST00000581031 KRTAP12-1P59990 96 aa8.79□□□□□ -1
RHOT1-209ENST00000581031 C10orf95Q9H7T3 257 aa8.78□□□□□ -1
RHOT1-209ENST00000581031 ROMO1P60602 79 aa8.71□□□□□ -1.01
RHOT1-209ENST00000581031 M0R2T5 61 aa8.66□□□□□ -1.02
RHOT1-209ENST00000581031 KRTAP25-1Q3LHN0 102 aa8.63□□□□□ -1.03
RHOT1-209ENST00000581031 LCE2CQ5TA81 110 aa8.54□□□□□ -1.04
RHOT1-209ENST00000581031 CAMK2N1Q7Z7J9 78 aa8.43□□□□□ -1.06
RHOT1-209ENST00000581031 MT1HP80294 61 aa8.37□□□□□ -1.07
RHOT1-209ENST00000581031 KRTAP10-10P60014 251 aa8.29□□□□□ -1.08
RHOT1-209ENST00000581031 USH2AO75445 5202 aa8.27□□□□□ -1.09
RHOT1-209ENST00000581031 MT1FP04733 61 aa8.21□□□□□ -1.1
RHOT1-209ENST00000581031 MT2AP02795 61 aa8.15□□□□□ -1.1
RHOT1-209ENST00000581031 KRTAP19-1Q8IUB9 90 aa8.14□□□□□ -1.11
RHOT1-209ENST00000581031 KRTAP9-8Q9BYQ0 159 aa8.1□□□□□ -1.11
RHOT1-209ENST00000581031 FSIP2Q5CZC0 6907 aa8.07□□□□□ -1.12
RHOT1-209ENST00000581031 PLAC4Q8WY50 150 aa8.03□□□□□ -1.12
RHOT1-209ENST00000581031 SPRR2GQ9BYE4 73 aa7.98□□□□□ -1.13
RHOT1-209ENST00000581031 KMT2DO14686 5537 aa7.89□□□□□ -1.15
RHOT1-209ENST00000581031 TNP1P09430 55 aa7.87□□□□□ -1.15
RHOT1-209ENST00000581031 MT1BP07438 61 aa7.76□□□□□ -1.17
RHOT1-209ENST00000581031 KRTAP15-1Q3LI76 137 aa7.76□□□□□ -1.17
RHOT1-209ENST00000581031 KRTAP9-3Q9BYQ3 159 aa7.74□□□□□ -1.17
RHOT1-209ENST00000581031 NDUFAF8A1L188 74 aa7.71□□□□□ -1.17
RHOT1-209ENST00000581031 LCE3AQ5TA76 89 aa7.65□□□□□ -1.18
RHOT1-209ENST00000581031 LCE2BO14633 110 aa7.63□□□□□ -1.19
RHOT1-209ENST00000581031 KRTAP10-5P60370 271 aa7.63□□□□□ -1.19
RHOT1-209ENST00000581031 MT1XP80297 61 aa7.63□□□□□ -1.19
RHOT1-209ENST00000581031 KRTAP19-8Q3LI54 63 aa7.62□□□□□ -1.19
RHOT1-209ENST00000581031 PP632Q6XCG6 107 aa7.58□□□□□ -1.2
RHOT1-209ENST00000581031 H3BS24 57 aa7.56□□□□□ -1.2
RHOT1-209ENST00000581031 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
RHOT1-209ENST00000581031 KRTAP10-7P60409 375 aaPredicted RBP7.55□□□□□ -1.2
RHOT1-209ENST00000581031 SSPOA2VEC9 5147 aa7.39□□□□□ -1.23
RHOT1-209ENST00000581031 KRTAP10-12P60413 245 aa7.38□□□□□ -1.23
RHOT1-209ENST00000581031 KRTAP4-8A0A0G2JLE6 195 aa7.33□□□□□ -1.24
RHOT1-209ENST00000581031 KRTAP4-8Q9BYQ9 185 aa7.33□□□□□ -1.24
RHOT1-209ENST00000581031 PRO2289Q9P1D8 64 aa7.27□□□□□ -1.24
RHOT1-209ENST00000581031 LUZP6Q538Z0 58 aa7.24□□□□□ -1.25
RHOT1-209ENST00000581031 KRTAP12-3P60328 96 aa7.22□□□□□ -1.25
RHOT1-209ENST00000581031 KRTAP23-1A1A580 65 aa7.21□□□□□ -1.26
RHOT1-209ENST00000581031 KRTAP8-1Q8IUC2 63 aa7.17□□□□□ -1.26
RHOT1-209ENST00000581031 KRTAP19-5Q3LI72 72 aa7.13□□□□□ -1.27
RHOT1-209ENST00000581031 MUC12Q9UKN1 5478 aa7.04□□□□□ -1.28
RHOT1-209ENST00000581031 FCGBPQ9Y6R7 5405 aaPredicted RBP7.03□□□□□ -1.28
RHOT1-209ENST00000581031 DSTQ03001 7570 aaKnown RBP6.99□□□□□ -1.29
RHOT1-209ENST00000581031 SPRR5A0A1B0GTR4 108 aa6.93□□□□□ -1.3
RHOT1-209ENST00000581031 KRTAP4-7Q9BYR0 210 aa6.92□□□□□ -1.3
RHOT1-209ENST00000581031 MACF1Q9UPN3 7388 aaKnown RBP6.81□□□□□ -1.32
RHOT1-209ENST00000581031 KRTAP19-7Q3SYF9 63 aa6.8□□□□□ -1.32
RHOT1-209ENST00000581031 SYNE2Q8WXH0 6885 aaKnown RBP6.79□□□□□ -1.32
RHOT1-209ENST00000581031 LCE3CQ5T5A8 94 aa6.71□□□□□ -1.33
RHOT1-209ENST00000581031 KRTAP19-6Q3LI70 58 aa6.69□□□□□ -1.34
RHOT1-209ENST00000581031 KRTAP9-6A8MVA2 160 aa6.63□□□□□ -1.35
RHOT1-209ENST00000581031 MT1EP04732 61 aa6.59□□□□□ -1.35
RHOT1-209ENST00000581031 KRTAP4-3Q9BYR4 195 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms