RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 COA5Q86WW8 74 aa6.07□□□□□ -1.44
SNORD3C-201ENST00000580533 COX6B2Q6YFQ2 88 aa6.06□□□□□ -1.44
SNORD3C-201ENST00000580533 HRES1P13985 223 aa6.02□□□□□ -1.45
SNORD3C-201ENST00000580533 PRO0628Q9UI54 55 aa6.02□□□□□ -1.45
SNORD3C-201ENST00000580533 DMAC1Q96GE9 116 aa5.98□□□□□ -1.45
SNORD3C-201ENST00000580533 ACYP2P14621 99 aa5.97□□□□□ -1.45
SNORD3C-201ENST00000580533 A8MUN3 132 aa5.96□□□□□ -1.46
SNORD3C-201ENST00000580533 LINC01558Q9Y6Z2 57 aa5.96□□□□□ -1.46
SNORD3C-201ENST00000580533 PSPHP1O15172 72 aa5.95□□□□□ -1.46
SNORD3C-201ENST00000580533 Q5VV11 94 aa5.94□□□□□ -1.46
SNORD3C-201ENST00000580533 BRK1Q8WUW1 75 aa5.94□□□□□ -1.46
SNORD3C-201ENST00000580533 FAT4Q6V0I7 4981 aa5.93□□□□□ -1.46
SNORD3C-201ENST00000580533 PRR15LQ9BU68 103 aa5.92□□□□□ -1.46
SNORD3C-201ENST00000580533 KRTAP19-2Q3LHN2 52 aa5.9□□□□□ -1.46
SNORD3C-201ENST00000580533 H1FX-AS1Q4G0G2 97 aa5.9□□□□□ -1.46
SNORD3C-201ENST00000580533 CHKB-CPT1BH3BT56 60 aa5.86□□□□□ -1.47
SNORD3C-201ENST00000580533 M0R2T5 61 aa5.86□□□□□ -1.47
SNORD3C-201ENST00000580533 MT1HP80294 61 aa5.82□□□□□ -1.48
SNORD3C-201ENST00000580533 FLGP20930 4061 aaPredicted RBP5.81□□□□□ -1.48
SNORD3C-201ENST00000580533 S4R3F8 94 aa5.8□□□□□ -1.48
SNORD3C-201ENST00000580533 A6NED7 52 aa5.78□□□□□ -1.48
SNORD3C-201ENST00000580533 KRTAP3-1Q9BYR8 98 aa5.77□□□□□ -1.49
SNORD3C-201ENST00000580533 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
SNORD3C-201ENST00000580533 LCA10Q71F78 164 aa5.76□□□□□ -1.49
SNORD3C-201ENST00000580533 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
SNORD3C-201ENST00000580533 KRTAP4-6Q9BYQ5 205 aa5.74□□□□□ -1.49
SNORD3C-201ENST00000580533 A0A1B0GU69 56 aa5.72□□□□□ -1.49
SNORD3C-201ENST00000580533 CSAG1Q6PB30 78 aa5.72□□□□□ -1.49
SNORD3C-201ENST00000580533 A8MU10 97 aa5.71□□□□□ -1.5
SNORD3C-201ENST00000580533 SPTSSBQ8NFR3 76 aa5.71□□□□□ -1.5
SNORD3C-201ENST00000580533 KRTAP10-6P60371 365 aaPredicted RBP5.67□□□□□ -1.5
SNORD3C-201ENST00000580533 SPATA8Q6RVD6 105 aa5.65□□□□□ -1.5
SNORD3C-201ENST00000580533 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
SNORD3C-201ENST00000580533 UQCR11O14957 56 aa5.62□□□□□ -1.51
SNORD3C-201ENST00000580533 A6NN06 94 aa5.61□□□□□ -1.51
SNORD3C-201ENST00000580533 SEC61GP60059 68 aa5.61□□□□□ -1.51
SNORD3C-201ENST00000580533 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
SNORD3C-201ENST00000580533 H0YAA0 97 aa5.56□□□□□ -1.52
SNORD3C-201ENST00000580533 KRTAP9-8Q9BYQ0 159 aa5.54□□□□□ -1.52
SNORD3C-201ENST00000580533 KRTAP10-10P60014 251 aa5.53□□□□□ -1.52
SNORD3C-201ENST00000580533 KTN1-AS1Q86SY8 53 aa5.52□□□□□ -1.53
SNORD3C-201ENST00000580533 MT2AP02795 61 aa5.51□□□□□ -1.53
SNORD3C-201ENST00000580533 H3BS24 57 aa5.5□□□□□ -1.53
SNORD3C-201ENST00000580533 A0A1B0GU33 70 aa5.47□□□□□ -1.53
SNORD3C-201ENST00000580533 ADM2Q7Z4H4 148 aa5.47□□□□□ -1.53
SNORD3C-201ENST00000580533 CRIPTQ9P021 101 aa5.47□□□□□ -1.53
SNORD3C-201ENST00000580533 MT1FP04733 61 aa5.46□□□□□ -1.54
SNORD3C-201ENST00000580533 KRTAP9-2Q9BYQ4 174 aa5.45□□□□□ -1.54
SNORD3C-201ENST00000580533 KRTAP9-3Q9BYQ3 159 aa5.36□□□□□ -1.55
SNORD3C-201ENST00000580533 KRTAP4-8Q9BYQ9 185 aa5.36□□□□□ -1.55
SNORD3C-201ENST00000580533 R4GN34 69 aa5.36□□□□□ -1.55
SNORD3C-201ENST00000580533 P0C880 135 aa5.33□□□□□ -1.56
SNORD3C-201ENST00000580533 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
SNORD3C-201ENST00000580533 M0QZ58 72 aa5.3□□□□□ -1.56
SNORD3C-201ENST00000580533 K7ERS5 55 aa5.27□□□□□ -1.57
SNORD3C-201ENST00000580533 KRTAP9-6A0A140TA67 174 aa5.26□□□□□ -1.57
SNORD3C-201ENST00000580533 KRTAP19-1Q8IUB9 90 aa5.26□□□□□ -1.57
SNORD3C-201ENST00000580533 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.25□□□□□ -1.57
SNORD3C-201ENST00000580533 KRTAP4-12Q9BQ66 201 aa5.25□□□□□ -1.57
SNORD3C-201ENST00000580533 USH2AO75445 5202 aa5.23□□□□□ -1.57
SNORD3C-201ENST00000580533 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
SNORD3C-201ENST00000580533 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
SNORD3C-201ENST00000580533 KRTAP19-8Q3LI54 63 aa5.2□□□□□ -1.58
SNORD3C-201ENST00000580533 FSIP2Q5CZC0 6907 aa5.2□□□□□ -1.58
SNORD3C-201ENST00000580533 LINC01554Q52M75 96 aa5.19□□□□□ -1.58
SNORD3C-201ENST00000580533 PLAC4Q8WY50 150 aa5.17□□□□□ -1.58
SNORD3C-201ENST00000580533 CRCT1Q9UGL9 99 aa5.14□□□□□ -1.59
SNORD3C-201ENST00000580533 A0A0D9SG42 100 aa5.13□□□□□ -1.59
SNORD3C-201ENST00000580533 ROMO1P60602 79 aa5.12□□□□□ -1.59
SNORD3C-201ENST00000580533 SSPOA2VEC9 5147 aa5.09□□□□□ -1.59
SNORD3C-201ENST00000580533 MT1BP07438 61 aa5.09□□□□□ -1.59
SNORD3C-201ENST00000580533 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
SNORD3C-201ENST00000580533 KRTAP12-1P59990 96 aa5.08□□□□□ -1.6
SNORD3C-201ENST00000580533 KRTAP25-1Q3LHN0 102 aa5.08□□□□□ -1.6
SNORD3C-201ENST00000580533 KRTAP12-2P59991 146 aa5.05□□□□□ -1.6
SNORD3C-201ENST00000580533 KRTAP19-6Q3LI70 58 aa5.05□□□□□ -1.6
SNORD3C-201ENST00000580533 PRO2289Q9P1D8 64 aa5.05□□□□□ -1.6
SNORD3C-201ENST00000580533 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
SNORD3C-201ENST00000580533 KRTAP9-9Q9BYP9 154 aa5.01□□□□□ -1.61
SNORD3C-201ENST00000580533 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
SNORD3C-201ENST00000580533 SPINT4Q6UDR6 99 aa5□□□□□ -1.61
SNORD3C-201ENST00000580533 CAMK2N1Q7Z7J9 78 aa5□□□□□ -1.61
SNORD3C-201ENST00000580533 KRTAP10-5P60370 271 aa4.96□□□□□ -1.62
SNORD3C-201ENST00000580533 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
SNORD3C-201ENST00000580533 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
SNORD3C-201ENST00000580533 MT1XP80297 61 aa4.88□□□□□ -1.63
SNORD3C-201ENST00000580533 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
SNORD3C-201ENST00000580533 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
SNORD3C-201ENST00000580533 C10orf95Q9H7T3 257 aa4.8□□□□□ -1.64
SNORD3C-201ENST00000580533 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
SNORD3C-201ENST00000580533 TNP1P09430 55 aa4.7□□□□□ -1.66
SNORD3C-201ENST00000580533 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
SNORD3C-201ENST00000580533 MACF1Q9UPN3 7388 aaKnown RBP4.67□□□□□ -1.66
SNORD3C-201ENST00000580533 KRTAP10-12P60413 245 aa4.67□□□□□ -1.66
SNORD3C-201ENST00000580533 PP632Q6XCG6 107 aa4.66□□□□□ -1.66
SNORD3C-201ENST00000580533 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.67
SNORD3C-201ENST00000580533 SYNE2Q8WXH0 6885 aaKnown RBP4.64□□□□□ -1.67
SNORD3C-201ENST00000580533 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
SNORD3C-201ENST00000580533 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
SNORD3C-201ENST00000580533 KRTAP8-1Q8IUC2 63 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms