RNA–Protein interactions for RNA: ENST00000579505.5

MSI2-210, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-210ENST00000579505 KRTAP9-2Q9BYQ4 174 aa8.57□□□□□ -1.04
MSI2-210ENST00000579505 ACYP2P14621 99 aa8.56□□□□□ -1.04
MSI2-210ENST00000579505 DMAC1Q96GE9 116 aa8.56□□□□□ -1.04
MSI2-210ENST00000579505 MT2AP02795 61 aa8.54□□□□□ -1.04
MSI2-210ENST00000579505 SPANXA2-OT1Q8N9U9 137 aa8.52□□□□□ -1.05
MSI2-210ENST00000579505 KRTAP10-10P60014 251 aa8.51□□□□□ -1.05
MSI2-210ENST00000579505 MT1FP04733 61 aa8.47□□□□□ -1.05
MSI2-210ENST00000579505 SPTSSBQ8NFR3 76 aa8.47□□□□□ -1.05
MSI2-210ENST00000579505 CHKB-CPT1BH3BT56 60 aa8.43□□□□□ -1.06
MSI2-210ENST00000579505 KRTAP3-3Q9BYR6 98 aa8.42□□□□□ -1.06
MSI2-210ENST00000579505 H0YAA0 97 aa8.35□□□□□ -1.07
MSI2-210ENST00000579505 KRTAP9-3Q9BYQ3 159 aa8.35□□□□□ -1.07
MSI2-210ENST00000579505 H7BZZ5 65 aa8.31□□□□□ -1.08
MSI2-210ENST00000579505 CRIPTQ9P021 101 aa8.28□□□□□ -1.08
MSI2-210ENST00000579505 CCDC179H3BU77 68 aa8.25□□□□□ -1.09
MSI2-210ENST00000579505 ATP5EP56381 51 aaPredicted RBP8.23□□□□□ -1.09
MSI2-210ENST00000579505 ADM2Q7Z4H4 148 aa8.23□□□□□ -1.09
MSI2-210ENST00000579505 FSIP2Q5CZC0 6907 aa8.22□□□□□ -1.09
MSI2-210ENST00000579505 LCE2BO14633 110 aa8.22□□□□□ -1.09
MSI2-210ENST00000579505 COA5Q86WW8 74 aa8.2□□□□□ -1.1
MSI2-210ENST00000579505 CYSTM1Q9H1C7 97 aa8.19□□□□□ -1.1
MSI2-210ENST00000579505 CRCT1Q9UGL9 99 aa8.17□□□□□ -1.1
MSI2-210ENST00000579505 KRTAP9-6A0A140TA67 174 aa8.16□□□□□ -1.1
MSI2-210ENST00000579505 USH2AO75445 5202 aa8.14□□□□□ -1.11
MSI2-210ENST00000579505 SEC61GP60059 68 aa8.11□□□□□ -1.11
MSI2-210ENST00000579505 TMEM258P61165 79 aa8.11□□□□□ -1.11
MSI2-210ENST00000579505 KRTAP19-1Q8IUB9 90 aa8.09□□□□□ -1.11
MSI2-210ENST00000579505 SPRR2GQ9BYE4 73 aa8.08□□□□□ -1.12
MSI2-210ENST00000579505 R4GN34 69 aa8.08□□□□□ -1.12
MSI2-210ENST00000579505 SERP1Q9Y6X1 66 aa8.04□□□□□ -1.12
MSI2-210ENST00000579505 Q5VV11 94 aa8.01□□□□□ -1.13
MSI2-210ENST00000579505 SSPOA2VEC9 5147 aa8□□□□□ -1.13
MSI2-210ENST00000579505 P0C880 135 aa8□□□□□ -1.13
MSI2-210ENST00000579505 M0QZ58 72 aa7.97□□□□□ -1.13
MSI2-210ENST00000579505 KRTAP3-2Q9BYR7 98 aa7.97□□□□□ -1.13
MSI2-210ENST00000579505 KRTAP19-8Q3LI54 63 aa7.95□□□□□ -1.14
MSI2-210ENST00000579505 MT1BP07438 61 aa7.88□□□□□ -1.15
MSI2-210ENST00000579505 PCP4P48539 62 aa7.88□□□□□ -1.15
MSI2-210ENST00000579505 KRTAP19-6Q3LI70 58 aa7.88□□□□□ -1.15
MSI2-210ENST00000579505 A0A1B0GU69 56 aa7.87□□□□□ -1.15
MSI2-210ENST00000579505 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
MSI2-210ENST00000579505 PRR15LQ9BU68 103 aa7.86□□□□□ -1.15
MSI2-210ENST00000579505 LINC01554Q52M75 96 aa7.83□□□□□ -1.16
MSI2-210ENST00000579505 A0A1B0GU33 70 aa7.78□□□□□ -1.16
MSI2-210ENST00000579505 FCGBPQ9Y6R7 5405 aaPredicted RBP7.76□□□□□ -1.17
MSI2-210ENST00000579505 LINC01558Q9Y6Z2 57 aa7.73□□□□□ -1.17
MSI2-210ENST00000579505 A6NN06 94 aa7.71□□□□□ -1.18
MSI2-210ENST00000579505 V9GYY9 64 aa7.71□□□□□ -1.18
MSI2-210ENST00000579505 PRO2289Q9P1D8 64 aa7.7□□□□□ -1.18
MSI2-210ENST00000579505 SMIM26A0A096LP01 95 aa7.64□□□□□ -1.19
MSI2-210ENST00000579505 KRTAP10-5P60370 271 aa7.63□□□□□ -1.19
MSI2-210ENST00000579505 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.59□□□□□ -1.19
MSI2-210ENST00000579505 RPS28P62857 69 aaKnown RBP7.59□□□□□ -1.19
MSI2-210ENST00000579505 KRTAP13-4Q3LI77 160 aa7.59□□□□□ -1.19
MSI2-210ENST00000579505 SPATA8Q6RVD6 105 aa7.58□□□□□ -1.2
MSI2-210ENST00000579505 A0A0D9SG42 100 aa7.56□□□□□ -1.2
MSI2-210ENST00000579505 UQCR11O14957 56 aa7.55□□□□□ -1.2
MSI2-210ENST00000579505 MACF1Q9UPN3 7388 aaKnown RBP7.55□□□□□ -1.2
MSI2-210ENST00000579505 Q1T7F1 81 aa7.54□□□□□ -1.2
MSI2-210ENST00000579505 CAMK2N1Q7Z7J9 78 aa7.52□□□□□ -1.21
MSI2-210ENST00000579505 MT1XP80297 61 aa7.48□□□□□ -1.21
MSI2-210ENST00000579505 SPINT4Q6UDR6 99 aa7.47□□□□□ -1.21
MSI2-210ENST00000579505 PSPHP1O15172 72 aa7.41□□□□□ -1.22
MSI2-210ENST00000579505 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
MSI2-210ENST00000579505 MIR22HGQ0VDD5 57 aa7.37□□□□□ -1.23
MSI2-210ENST00000579505 A8MU10 97 aa7.35□□□□□ -1.23
MSI2-210ENST00000579505 KRTAP12-1P59990 96 aa7.35□□□□□ -1.23
MSI2-210ENST00000579505 SYNE2Q8WXH0 6885 aaKnown RBP7.35□□□□□ -1.23
MSI2-210ENST00000579505 K7ERS5 55 aa7.32□□□□□ -1.24
MSI2-210ENST00000579505 A6NED7 52 aa7.28□□□□□ -1.24
MSI2-210ENST00000579505 KRTAP12-2P59991 146 aa7.28□□□□□ -1.24
MSI2-210ENST00000579505 KRTAP6-3Q3LI67 103 aa7.24□□□□□ -1.25
MSI2-210ENST00000579505 KRTAP10-7P60409 375 aaPredicted RBP7.14□□□□□ -1.27
MSI2-210ENST00000579505 KRTAP10-12P60413 245 aa7.13□□□□□ -1.27
MSI2-210ENST00000579505 KMT2DO14686 5537 aa7.09□□□□□ -1.27
MSI2-210ENST00000579505 KRTAP5-9P26371 169 aa7.08□□□□□ -1.28
MSI2-210ENST00000579505 KRTAP8-1Q8IUC2 63 aa7.07□□□□□ -1.28
MSI2-210ENST00000579505 TNP1P09430 55 aa7.05□□□□□ -1.28
MSI2-210ENST00000579505 KRTAP4-8A0A0G2JLE6 195 aa7.02□□□□□ -1.29
MSI2-210ENST00000579505 KRTAP4-8Q9BYQ9 185 aa7.02□□□□□ -1.29
MSI2-210ENST00000579505 CDC42SE1Q9NRR8 79 aa7.02□□□□□ -1.29
MSI2-210ENST00000579505 C10orf95Q9H7T3 257 aa6.96□□□□□ -1.3
MSI2-210ENST00000579505 SPRR2FQ96RM1 72 aa6.92□□□□□ -1.3
MSI2-210ENST00000579505 MUC12Q9UKN1 5478 aa6.92□□□□□ -1.3
MSI2-210ENST00000579505 KRTAP25-1Q3LHN0 102 aa6.87□□□□□ -1.31
MSI2-210ENST00000579505 NEBP20929 6669 aa6.87□□□□□ -1.31
MSI2-210ENST00000579505 MDN1Q9NU22 5596 aa6.77□□□□□ -1.33
MSI2-210ENST00000579505 ROMO1P60602 79 aa6.75□□□□□ -1.33
MSI2-210ENST00000579505 BRK1Q8WUW1 75 aa6.74□□□□□ -1.33
MSI2-210ENST00000579505 SPRR2EP22531 72 aa6.72□□□□□ -1.33
MSI2-210ENST00000579505 SPRR2BP35325 72 aa6.72□□□□□ -1.33
MSI2-210ENST00000579505 SPRR2AP35326 72 aa6.72□□□□□ -1.33
MSI2-210ENST00000579505 LCE1AQ5T7P2 110 aa6.71□□□□□ -1.34
MSI2-210ENST00000579505 KRTAP19-7Q3SYF9 63 aa6.69□□□□□ -1.34
MSI2-210ENST00000579505 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
MSI2-210ENST00000579505 KRTAP23-1A1A580 65 aa6.65□□□□□ -1.34
MSI2-210ENST00000579505 MT1EP04732 61 aa6.61□□□□□ -1.35
MSI2-210ENST00000579505 KRTAP19-5Q3LI72 72 aa6.61□□□□□ -1.35
MSI2-210ENST00000579505 PP632Q6XCG6 107 aa6.56□□□□□ -1.36
MSI2-210ENST00000579505 KRTAP12-3P60328 96 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms