RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 LCE2DQ5TA82 110 aaPredicted RBP3.96□□□□□ -1.78
DDX42-207ENST00000578593 RYR1P21817 5038 aa3.95□□□□□ -1.78
DDX42-207ENST00000578593 LRP1BQ9NZR2 4599 aa3.95□□□□□ -1.78
DDX42-207ENST00000578593 PCLOQ9Y6V0 5065 aa3.94□□□□□ -1.78
DDX42-207ENST00000578593 PKD1P98161 4303 aa3.93□□□□□ -1.78
DDX42-207ENST00000578593 HERC2O95714 4834 aa3.93□□□□□ -1.78
DDX42-207ENST00000578593 PRO2289Q9P1D8 64 aa3.93□□□□□ -1.78
DDX42-207ENST00000578593 DMBT1Q9UGM3 2413 aaPredicted RBP3.91□□□□□ -1.78
DDX42-207ENST00000578593 PLAC4Q8WY50 150 aa3.91□□□□□ -1.78
DDX42-207ENST00000578593 KIAA1109Q2LD37 5005 aa3.91□□□□□ -1.78
DDX42-207ENST00000578593 KRTAP3-1Q9BYR8 98 aa3.91□□□□□ -1.78
DDX42-207ENST00000578593 FAT2Q9NYQ8 4349 aa3.9□□□□□ -1.78
DDX42-207ENST00000578593 VPS13BQ7Z7G8 4022 aa3.89□□□□□ -1.79
DDX42-207ENST00000578593 KRTAP1-4P0C5Y4 121 aa3.89□□□□□ -1.79
DDX42-207ENST00000578593 XP32Q5T750 250 aa3.87□□□□□ -1.79
DDX42-207ENST00000578593 KRTAP10-2P60368 255 aa3.85□□□□□ -1.79
DDX42-207ENST00000578593 A0A0D9SG42 100 aa3.84□□□□□ -1.79
DDX42-207ENST00000578593 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
DDX42-207ENST00000578593 R4GN34 69 aa3.84□□□□□ -1.79
DDX42-207ENST00000578593 ABCA13Q86UQ4 5058 aa3.82□□□□□ -1.8
DDX42-207ENST00000578593 C9orf92A6NGG3 77 aa3.82□□□□□ -1.8
DDX42-207ENST00000578593 KRTAP13-4Q3LI77 160 aa3.82□□□□□ -1.8
DDX42-207ENST00000578593 KRTAP10-8P60410 259 aa3.81□□□□□ -1.8
DDX42-207ENST00000578593 S4R3F8 94 aa3.81□□□□□ -1.8
DDX42-207ENST00000578593 INE1O15225 51 aa3.8□□□□□ -1.8
DDX42-207ENST00000578593 PKHD1P08F94 4074 aa3.79□□□□□ -1.8
DDX42-207ENST00000578593 KRTAP10-1P60331 282 aa3.79□□□□□ -1.8
DDX42-207ENST00000578593 LCE2CQ5TA81 110 aa3.77□□□□□ -1.81
DDX42-207ENST00000578593 KRTAP10-6P60371 365 aaPredicted RBP3.77□□□□□ -1.81
DDX42-207ENST00000578593 KRTAP4-5Q9BYR2 181 aa3.77□□□□□ -1.81
DDX42-207ENST00000578593 PKHD1L1Q86WI1 4243 aa3.76□□□□□ -1.81
DDX42-207ENST00000578593 KRTAP12-2P59991 146 aa3.76□□□□□ -1.81
DDX42-207ENST00000578593 LCE2AQ5TA79 106 aaPredicted RBP3.76□□□□□ -1.81
DDX42-207ENST00000578593 RPS29P62273 56 aaKnown RBP3.74□□□□□ -1.81
DDX42-207ENST00000578593 HERC1Q15751 4861 aa3.73□□□□□ -1.81
DDX42-207ENST00000578593 DYNC1H1Q14204 4646 aaKnown RBP3.73□□□□□ -1.81
DDX42-207ENST00000578593 APOBP04114 4563 aaKnown RBP3.71□□□□□ -1.82
DDX42-207ENST00000578593 HSPG2P98160 4391 aa3.7□□□□□ -1.82
DDX42-207ENST00000578593 A0A1B0GVY2 172 aa3.69□□□□□ -1.82
DDX42-207ENST00000578593 FAT1Q14517 4588 aa3.69□□□□□ -1.82
DDX42-207ENST00000578593 KRTAP12-1P59990 96 aa3.68□□□□□ -1.82
DDX42-207ENST00000578593 LCE2BO14633 110 aa3.66□□□□□ -1.82
DDX42-207ENST00000578593 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
DDX42-207ENST00000578593 SMR3BP02814 79 aaPredicted RBP3.62□□□□□ -1.83
DDX42-207ENST00000578593 MYCBP2O75592 4640 aa3.61□□□□□ -1.83
DDX42-207ENST00000578593 FAT3Q8TDW7 4589 aa3.61□□□□□ -1.83
DDX42-207ENST00000578593 TNXBP22105 4242 aa3.6□□□□□ -1.83
DDX42-207ENST00000578593 SPRR5A0A1B0GTR4 108 aa3.6□□□□□ -1.83
DDX42-207ENST00000578593 UBR4Q5T4S7 5183 aa3.59□□□□□ -1.83
DDX42-207ENST00000578593 KRTAP10-4P60372 401 aaPredicted RBP3.59□□□□□ -1.84
DDX42-207ENST00000578593 LRP1Q07954 4544 aaKnown RBP3.58□□□□□ -1.84
DDX42-207ENST00000578593 M0QZ58 72 aa3.53□□□□□ -1.84
DDX42-207ENST00000578593 Q5VSD8 79 aa3.5□□□□□ -1.85
DDX42-207ENST00000578593 LPAP08519 4548 aa3.5□□□□□ -1.85
DDX42-207ENST00000578593 HMCN2Q8NDA2 5059 aa3.47□□□□□ -1.85
DDX42-207ENST00000578593 LOC100996750A0A140TA64 210 aa3.43□□□□□ -1.86
DDX42-207ENST00000578593 KRTAP4-6Q9BYQ5 205 aa3.43□□□□□ -1.86
DDX42-207ENST00000578593 RNF213Q63HN8 5207 aa3.43□□□□□ -1.86
DDX42-207ENST00000578593 LORP23490 312 aaPredicted RBP3.42□□□□□ -1.86
DDX42-207ENST00000578593 LRP2P98164 4655 aa3.4□□□□□ -1.87
DDX42-207ENST00000578593 MT1HL1P0DM35 61 aa3.28□□□□□ -1.88
DDX42-207ENST00000578593 MUC17Q685J3 4493 aa3.27□□□□□ -1.89
DDX42-207ENST00000578593 MUC2Q02817 5179 aa3.21□□□□□ -1.89
DDX42-207ENST00000578593 KRTAP9-6A0A140TA67 174 aa3.2□□□□□ -1.9
DDX42-207ENST00000578593 KRTAP9-2Q9BYQ4 174 aa3.2□□□□□ -1.9
DDX42-207ENST00000578593 TNP1P09430 55 aa3.15□□□□□ -1.9
DDX42-207ENST00000578593 KRTAP4-1Q9BYQ7 146 aa3.14□□□□□ -1.91
DDX42-207ENST00000578593 FAT4Q6V0I7 4981 aa3.14□□□□□ -1.91
DDX42-207ENST00000578593 KRTAP19-2Q3LHN2 52 aa3.13□□□□□ -1.91
DDX42-207ENST00000578593 FSIP2Q5CZC0 6907 aa3.12□□□□□ -1.91
DDX42-207ENST00000578593 FLGP20930 4061 aaPredicted RBP3.09□□□□□ -1.91
DDX42-207ENST00000578593 KRTAP10-10P60014 251 aa3.08□□□□□ -1.92
DDX42-207ENST00000578593 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
DDX42-207ENST00000578593 CRCT1Q9UGL9 99 aa2.97□□□□□ -1.93
DDX42-207ENST00000578593 SPRR2GQ9BYE4 73 aa2.89□□□□□ -1.95
DDX42-207ENST00000578593 KRTAP19-1Q8IUB9 90 aa2.88□□□□□ -1.95
DDX42-207ENST00000578593 KRTAP8-1Q8IUC2 63 aa2.88□□□□□ -1.95
DDX42-207ENST00000578593 KRTAP10-12P60413 245 aa2.86□□□□□ -1.95
DDX42-207ENST00000578593 KRTAP4-8Q9BYQ9 185 aa2.86□□□□□ -1.95
DDX42-207ENST00000578593 KRTAP9-8Q9BYQ0 159 aa2.85□□□□□ -1.95
DDX42-207ENST00000578593 KRTAP2-2Q9BYT5 123 aa2.85□□□□□ -1.95
DDX42-207ENST00000578593 KRTAP9-7A8MTY7 169 aa2.82□□□□□ -1.96
DDX42-207ENST00000578593 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
DDX42-207ENST00000578593 KRTAP12-3P60328 96 aa2.81□□□□□ -1.96
DDX42-207ENST00000578593 MT1HP80294 61 aa2.81□□□□□ -1.96
DDX42-207ENST00000578593 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.78□□□□□ -1.96
DDX42-207ENST00000578593 M0R2T5 61 aa2.78□□□□□ -1.96
DDX42-207ENST00000578593 SSPOA2VEC9 5147 aa2.77□□□□□ -1.97
DDX42-207ENST00000578593 KRTAP4-8A0A0G2JLE6 195 aa2.77□□□□□ -1.97
DDX42-207ENST00000578593 USH2AO75445 5202 aa2.77□□□□□ -1.97
DDX42-207ENST00000578593 LCE5AQ5TCM9 118 aa2.76□□□□□ -1.97
DDX42-207ENST00000578593 KRTAP4-7Q9BYR0 210 aa2.75□□□□□ -1.97
DDX42-207ENST00000578593 MT1FP04733 61 aa2.75□□□□□ -1.97
DDX42-207ENST00000578593 KRTAP10-5P60370 271 aa2.75□□□□□ -1.97
DDX42-207ENST00000578593 MT1XP80297 61 aa2.74□□□□□ -1.97
DDX42-207ENST00000578593 KRTAP19-4Q3LI73 84 aa2.73□□□□□ -1.97
DDX42-207ENST00000578593 MT2AP02795 61 aa2.72□□□□□ -1.97
DDX42-207ENST00000578593 SYNE2Q8WXH0 6885 aaKnown RBP2.72□□□□□ -1.97
DDX42-207ENST00000578593 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
DDX42-207ENST00000578593 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms