RNA–Protein interactions for RNA: ENST00000577226.5

PHF12-205, Transcript of PHD finger protein 12, humanhuman

TSL 1 (best) BASIC

Gene PHF12, Length 7,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF12-205ENST00000577226 ALMS1Q8TCU4 4167 aa7.04□□□□□ -1.28
PHF12-205ENST00000577226 ANK3Q12955 4377 aaKnown RBP7.04□□□□□ -1.28
PHF12-205ENST00000577226 OTOGQ6ZRI0 2925 aa7□□□□□ -1.29
PHF12-205ENST00000577226 HUWE1Q7Z6Z7 4374 aaKnown RBP6.98□□□□□ -1.29
PHF12-205ENST00000577226 SPRR2FQ96RM1 72 aa6.97□□□□□ -1.29
PHF12-205ENST00000577226 KRTAP10-4P60372 401 aaPredicted RBP6.87□□□□□ -1.31
PHF12-205ENST00000577226 MT1HP80294 61 aa6.72□□□□□ -1.33
PHF12-205ENST00000577226 AKAP9Q99996 3911 aa6.71□□□□□ -1.33
PHF12-205ENST00000577226 KRTAP19-5Q3LI72 72 aa6.69□□□□□ -1.34
PHF12-205ENST00000577226 DNAH1Q9P2D7 4330 aa6.66□□□□□ -1.34
PHF12-205ENST00000577226 SPRR2EP22531 72 aa6.63□□□□□ -1.35
PHF12-205ENST00000577226 SPRR2BP35325 72 aa6.63□□□□□ -1.35
PHF12-205ENST00000577226 SPRR2AP35326 72 aa6.63□□□□□ -1.35
PHF12-205ENST00000577226 ZNF469Q96JG9 3925 aaPredicted RBP6.62□□□□□ -1.35
PHF12-205ENST00000577226 LCE3CQ5T5A8 94 aa6.6□□□□□ -1.35
PHF12-205ENST00000577226 DNAH2Q9P225 4427 aa6.56□□□□□ -1.36
PHF12-205ENST00000577226 MT2AP02795 61 aa6.54□□□□□ -1.36
PHF12-205ENST00000577226 KRTAP4-1Q9BYQ7 146 aa6.52□□□□□ -1.37
PHF12-205ENST00000577226 LCE3BQ5TA77 95 aa6.5□□□□□ -1.37
PHF12-205ENST00000577226 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
PHF12-205ENST00000577226 SPRR2DP22532 72 aa6.41□□□□□ -1.38
PHF12-205ENST00000577226 MT1FP04733 61 aa6.39□□□□□ -1.39
PHF12-205ENST00000577226 LCE2BO14633 110 aa6.32□□□□□ -1.4
PHF12-205ENST00000577226 KRTAP12-4P60329 112 aa6.31□□□□□ -1.4
PHF12-205ENST00000577226 DNAH3Q8TD57 4116 aa6.29□□□□□ -1.4
PHF12-205ENST00000577226 DNAH9Q9NYC9 4486 aa6.26□□□□□ -1.41
PHF12-205ENST00000577226 VPS13BQ7Z7G8 4022 aa6.26□□□□□ -1.41
PHF12-205ENST00000577226 DNAH7Q8WXX0 4024 aa6.24□□□□□ -1.41
PHF12-205ENST00000577226 ANK2Q01484 3957 aa6.22□□□□□ -1.41
PHF12-205ENST00000577226 MT1GP13640 62 aa6.21□□□□□ -1.42
PHF12-205ENST00000577226 FRAS1Q86XX4 4008 aa6.19□□□□□ -1.42
PHF12-205ENST00000577226 KRTAP19-4Q3LI73 84 aa6.18□□□□□ -1.42
PHF12-205ENST00000577226 DNAH10Q8IVF4 4471 aa6.17□□□□□ -1.42
PHF12-205ENST00000577226 FAT2Q9NYQ8 4349 aa6.16□□□□□ -1.42
PHF12-205ENST00000577226 LYSTQ99698 3801 aa6.16□□□□□ -1.42
PHF12-205ENST00000577226 DNAH8Q96JB1 4490 aa6.13□□□□□ -1.43
PHF12-205ENST00000577226 CMYA5Q8N3K9 4069 aa6.12□□□□□ -1.43
PHF12-205ENST00000577226 DNAH17Q9UFH2 4485 aa6.12□□□□□ -1.43
PHF12-205ENST00000577226 KMT2AQ03164 3969 aa6.1□□□□□ -1.43
PHF12-205ENST00000577226 DNAH6Q9C0G6 4158 aa6.03□□□□□ -1.44
PHF12-205ENST00000577226 LCE2CQ5TA81 110 aa6□□□□□ -1.45
PHF12-205ENST00000577226 LCE3DQ9BYE3 92 aa6□□□□□ -1.45
PHF12-205ENST00000577226 DNAH5Q8TE73 4624 aa5.98□□□□□ -1.45
PHF12-205ENST00000577226 DNAH11Q96DT5 4516 aa5.97□□□□□ -1.45
PHF12-205ENST00000577226 LCE2DQ5TA82 110 aaPredicted RBP5.91□□□□□ -1.46
PHF12-205ENST00000577226 DYNC2H1Q8NCM8 4307 aaKnown RBP5.89□□□□□ -1.47
PHF12-205ENST00000577226 PRKDCP78527 4128 aaKnown RBP5.87□□□□□ -1.47
PHF12-205ENST00000577226 FAT1Q14517 4588 aa5.85□□□□□ -1.47
PHF12-205ENST00000577226 LCE3EQ5T5B0 92 aa5.84□□□□□ -1.47
PHF12-205ENST00000577226 MT1XP80297 61 aa5.82□□□□□ -1.48
PHF12-205ENST00000577226 KRTAP19-8Q3LI54 63 aa5.81□□□□□ -1.48
PHF12-205ENST00000577226 PLECQ15149 4684 aaKnown RBP5.81□□□□□ -1.48
PHF12-205ENST00000577226 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
PHF12-205ENST00000577226 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
PHF12-205ENST00000577226 KRTAP19-1Q8IUB9 90 aa5.79□□□□□ -1.48
PHF12-205ENST00000577226 VPS13DQ5THJ4 4388 aa5.79□□□□□ -1.48
PHF12-205ENST00000577226 MT4P47944 62 aa5.78□□□□□ -1.48
PHF12-205ENST00000577226 HECTD4Q9Y4D8 3996 aa5.74□□□□□ -1.49
PHF12-205ENST00000577226 LRP1BQ9NZR2 4599 aa5.74□□□□□ -1.49
PHF12-205ENST00000577226 SPRR5A0A1B0GTR4 108 aa5.73□□□□□ -1.49
PHF12-205ENST00000577226 LCE1BQ5T7P3 118 aa5.64□□□□□ -1.51
PHF12-205ENST00000577226 STARD9Q9P2P6 4700 aa5.64□□□□□ -1.51
PHF12-205ENST00000577226 DNHD1Q96M86 4753 aa5.63□□□□□ -1.51
PHF12-205ENST00000577226 LRP1Q07954 4544 aaKnown RBP5.62□□□□□ -1.51
PHF12-205ENST00000577226 MT1BP07438 61 aa5.6□□□□□ -1.51
PHF12-205ENST00000577226 KRTAP19-3Q7Z4W3 81 aa5.58□□□□□ -1.52
PHF12-205ENST00000577226 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
PHF12-205ENST00000577226 KRTAP9-8Q9BYQ0 159 aa5.54□□□□□ -1.52
PHF12-205ENST00000577226 APOBP04114 4563 aaKnown RBP5.53□□□□□ -1.52
PHF12-205ENST00000577226 SACSQ9NZJ4 4579 aa5.52□□□□□ -1.53
PHF12-205ENST00000577226 PRM1P04553 51 aa5.5□□□□□ -1.53
PHF12-205ENST00000577226 FLGP20930 4061 aaPredicted RBP5.5□□□□□ -1.53
PHF12-205ENST00000577226 MT3P25713 68 aa5.48□□□□□ -1.53
PHF12-205ENST00000577226 PKHD1L1Q86WI1 4243 aa5.47□□□□□ -1.53
PHF12-205ENST00000577226 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
PHF12-205ENST00000577226 FAT3Q8TDW7 4589 aa5.45□□□□□ -1.54
PHF12-205ENST00000577226 MT1LQ93083 61 aa5.43□□□□□ -1.54
PHF12-205ENST00000577226 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
PHF12-205ENST00000577226 PKD1P98161 4303 aa5.4□□□□□ -1.55
PHF12-205ENST00000577226 DYNC1H1Q14204 4646 aaKnown RBP5.36□□□□□ -1.55
PHF12-205ENST00000577226 PKHD1P08F94 4074 aa5.34□□□□□ -1.55
PHF12-205ENST00000577226 LCE5AQ5TCM9 118 aa5.34□□□□□ -1.55
PHF12-205ENST00000577226 MT1EP04732 61 aa5.31□□□□□ -1.56
PHF12-205ENST00000577226 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
PHF12-205ENST00000577226 KRTAP17-1Q9BYP8 105 aa5.26□□□□□ -1.57
PHF12-205ENST00000577226 KRTAP9-2Q9BYQ4 174 aa5.23□□□□□ -1.57
PHF12-205ENST00000577226 MT1MQ8N339 61 aa5.22□□□□□ -1.57
PHF12-205ENST00000577226 RYR1P21817 5038 aa5.22□□□□□ -1.57
PHF12-205ENST00000577226 LPAP08519 4548 aa5.15□□□□□ -1.59
PHF12-205ENST00000577226 MYCBP2O75592 4640 aa5.13□□□□□ -1.59
PHF12-205ENST00000577226 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
PHF12-205ENST00000577226 KRTAP19-6Q3LI70 58 aa5.12□□□□□ -1.59
PHF12-205ENST00000577226 HSPG2P98160 4391 aa5.11□□□□□ -1.59
PHF12-205ENST00000577226 KRTAP20-1Q3LI63 56 aa5.09□□□□□ -1.59
PHF12-205ENST00000577226 LCE1CQ5T751 118 aa5.07□□□□□ -1.6
PHF12-205ENST00000577226 LCE1EQ5T753 118 aa5.07□□□□□ -1.6
PHF12-205ENST00000577226 LCE1FQ5T754 118 aa5.07□□□□□ -1.6
PHF12-205ENST00000577226 LCE1AQ5T7P2 110 aa5.07□□□□□ -1.6
PHF12-205ENST00000577226 TNXBP22105 4242 aa5.03□□□□□ -1.6
PHF12-205ENST00000577226 RYR3Q15413 4870 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms