RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 PCNTO95613 3336 aa0.28□□□□□ -2.37
COPS3-213ENST00000577210 FLNCQ14315 2725 aa0.28□□□□□ -2.37
COPS3-213ENST00000577210 TGP01266 2768 aa0.28□□□□□ -2.37
COPS3-213ENST00000577210 TENM2Q9NT68 2774 aa0.28□□□□□ -2.37
COPS3-213ENST00000577210 PDZD2O15018 2839 aa0.28□□□□□ -2.37
COPS3-213ENST00000577210 VWFP04275 2813 aa0.28□□□□□ -2.37
COPS3-213ENST00000577210 COL7A1Q02388 2944 aa0.27□□□□□ -2.37
COPS3-213ENST00000577210 APOBP04114 4563 aaKnown RBP0.27□□□□□ -2.37
COPS3-213ENST00000577210 IGSF10Q6WRI0 2623 aa0.27□□□□□ -2.37
COPS3-213ENST00000577210 NBPF19A0A087WUL8 3843 aa0.27□□□□□ -2.37
COPS3-213ENST00000577210 M0QZ58 72 aa0.27□□□□□ -2.37
COPS3-213ENST00000577210 SPART-AS1P0CW21 52 aa0.27□□□□□ -2.37
COPS3-213ENST00000577210 DEFB124Q8NES8 71 aa0.27□□□□□ -2.37
COPS3-213ENST00000577210 HTTP42858 3142 aa0.27□□□□□ -2.37
COPS3-213ENST00000577210 MKI67P46013 3256 aaKnown RBP0.27□□□□□ -2.37
COPS3-213ENST00000577210 DMDP11532 3685 aa0.27□□□□□ -2.37
COPS3-213ENST00000577210 SPTBN5Q9NRC6 3674 aaKnown RBP0.27□□□□□ -2.37
COPS3-213ENST00000577210 ZANQ9Y493 2812 aa0.27□□□□□ -2.37
COPS3-213ENST00000577210 DMXL2Q8TDJ6 3036 aa0.27□□□□□ -2.37
COPS3-213ENST00000577210 DNAH2Q9P225 4427 aa0.27□□□□□ -2.37
COPS3-213ENST00000577210 FLNAP21333 2647 aaKnown RBP0.26□□□□□ -2.37
COPS3-213ENST00000577210 DNAH17Q9UFH2 4485 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 PKD1L1Q8TDX9 2849 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 KALRNO60229 2985 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 TRIOO75962 3097 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 LAMA2P24043 3122 aaKnown RBP0.26□□□□□ -2.37
COPS3-213ENST00000577210 CEP350Q5VT06 3117 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 CENPFP49454 3210 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 RANBP2P49792 3224 aaKnown RBP0.26□□□□□ -2.37
COPS3-213ENST00000577210 XIRP2A4UGR9 3374 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 USP34Q70CQ2 3546 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 DEFB4AO15263 64 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 Q5VSD8 79 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 MYCBP2O75592 4640 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 TENM4Q6N022 2769 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 CELSR1Q9NYQ6 3014 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 DMXL1Q9Y485 3027 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 LAMA3Q16787 3333 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 ASPMQ8IZT6 3477 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 DNAH8Q96JB1 4490 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 DNAH9Q9NYC9 4486 aa0.26□□□□□ -2.37
COPS3-213ENST00000577210 LRP1BQ9NZR2 4599 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 DNAH10Q8IVF4 4471 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 VPS13DQ5THJ4 4388 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 DYNC2H1Q8NCM8 4307 aaKnown RBP0.25□□□□□ -2.37
COPS3-213ENST00000577210 LAMA5O15230 3695 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 GOLGB1Q14789 3259 aaKnown RBP0.25□□□□□ -2.37
COPS3-213ENST00000577210 COL6A3P12111 3177 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 C5orf42Q9H799 3197 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 LAMA1P25391 3075 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 ZZEF1O43149 2961 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 MGAM2Q2M2H8 2515 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 HTN3P15516 51 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 SMG1Q96Q15 3661 aaKnown RBP0.25□□□□□ -2.37
COPS3-213ENST00000577210 SPENQ96T58 3664 aaKnown RBP0.25□□□□□ -2.37
COPS3-213ENST00000577210 SVEP1Q4LDE5 3571 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 ZFHX4Q86UP3 3567 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 RELNP78509 3460 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 SZT2Q5T011 3432 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 CELSR3Q9NYQ7 3312 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 COL12A1Q99715 3063 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 CUBNO60494 3623 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 UTRNP46939 3433 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 FAT3Q8TDW7 4589 aa0.25□□□□□ -2.37
COPS3-213ENST00000577210 WDFY4Q6ZS81 3184 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 CSMD3Q7Z407 3707 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 BRCA2P51587 3418 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 VCANP13611 3396 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 CDH23Q9H251 3354 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 ADGRG4Q8IZF6 3080 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 BOD1L1Q8NFC6 3051 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 MDN1Q9NU22 5596 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 PHGR1C9JFL3 82 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 RPS29P62273 56 aaKnown RBP0.24□□□□□ -2.37
COPS3-213ENST00000577210 DEFB135Q30KP9 77 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 SACSQ9NZJ4 4579 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 DNAH1Q9P2D7 4330 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 DNAH14Q0VDD8 3507 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 UNC80Q8N2C7 3258 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 ANK2Q01484 3957 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 PLECQ15149 4684 aaKnown RBP0.24□□□□□ -2.37
COPS3-213ENST00000577210 MYO15AQ9UKN7 3530 aa0.24□□□□□ -2.37
COPS3-213ENST00000577210 DYNC1H1Q14204 4646 aaKnown RBP0.23□□□□□ -2.37
COPS3-213ENST00000577210 DNAH5Q8TE73 4624 aa0.23□□□□□ -2.37
COPS3-213ENST00000577210 LRP1Q07954 4544 aaKnown RBP0.23□□□□□ -2.37
COPS3-213ENST00000577210 VPS13AQ96RL7 3174 aa0.23□□□□□ -2.37
COPS3-213ENST00000577210 SYNE1Q8NF91 8797 aaKnown RBP0.23□□□□□ -2.37
COPS3-213ENST00000577210 CSMD1Q96PZ7 3565 aa0.23□□□□□ -2.37
COPS3-213ENST00000577210 AKAP9Q99996 3911 aa0.23□□□□□ -2.37
COPS3-213ENST00000577210 ANK3Q12955 4377 aaKnown RBP0.23□□□□□ -2.37
COPS3-213ENST00000577210 HUWE1Q7Z6Z7 4374 aaKnown RBP0.23□□□□□ -2.37
COPS3-213ENST00000577210 TNP1P09430 55 aa0.23□□□□□ -2.37
COPS3-213ENST00000577210 KRTAP8-1Q8IUC2 63 aa0.23□□□□□ -2.37
COPS3-213ENST00000577210 DCHS1Q96JQ0 3298 aa0.23□□□□□ -2.37
COPS3-213ENST00000577210 CMYA5Q8N3K9 4069 aa0.23□□□□□ -2.37
COPS3-213ENST00000577210 MUC17Q685J3 4493 aa0.23□□□□□ -2.37
COPS3-213ENST00000577210 TRRAPQ9Y4A5 3859 aa0.23□□□□□ -2.37
COPS3-213ENST00000577210 FAT2Q9NYQ8 4349 aa0.22□□□□□ -2.37
COPS3-213ENST00000577210 FAT1Q14517 4588 aa0.22□□□□□ -2.37
COPS3-213ENST00000577210 VPS13CQ709C8 3753 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms