RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 CYSTM1Q9H1C7 97 aa6.2□□□□□ -1.42
NPLOC4-214ENST00000573876 SPANXA2-OT1Q8N9U9 137 aa6.19□□□□□ -1.42
NPLOC4-214ENST00000573876 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
NPLOC4-214ENST00000573876 ACYP2P14621 99 aa6.18□□□□□ -1.42
NPLOC4-214ENST00000573876 KRTAP9-8Q9BYQ0 159 aa6.18□□□□□ -1.42
NPLOC4-214ENST00000573876 H7BZZ5 65 aa6.17□□□□□ -1.42
NPLOC4-214ENST00000573876 CSAG1Q6PB30 78 aa6.17□□□□□ -1.42
NPLOC4-214ENST00000573876 KRTAP3-3Q9BYR6 98 aa6.17□□□□□ -1.42
NPLOC4-214ENST00000573876 MT2AP02795 61 aa6.14□□□□□ -1.43
NPLOC4-214ENST00000573876 LCE2DQ5TA82 110 aaPredicted RBP6.14□□□□□ -1.43
NPLOC4-214ENST00000573876 KRTAP10-10P60014 251 aa6.12□□□□□ -1.43
NPLOC4-214ENST00000573876 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
NPLOC4-214ENST00000573876 MT1FP04733 61 aa6.08□□□□□ -1.44
NPLOC4-214ENST00000573876 CHKB-CPT1BH3BT56 60 aa6.07□□□□□ -1.44
NPLOC4-214ENST00000573876 PCP4P48539 62 aa6.01□□□□□ -1.45
NPLOC4-214ENST00000573876 COA5Q86WW8 74 aa6.01□□□□□ -1.45
NPLOC4-214ENST00000573876 SPTSSBQ8NFR3 76 aa6.01□□□□□ -1.45
NPLOC4-214ENST00000573876 KRTAP9-3Q9BYQ3 159 aa5.98□□□□□ -1.45
NPLOC4-214ENST00000573876 ATP5EP56381 51 aaPredicted RBP5.97□□□□□ -1.45
NPLOC4-214ENST00000573876 TMEM258P61165 79 aa5.97□□□□□ -1.45
NPLOC4-214ENST00000573876 USH2AO75445 5202 aa5.95□□□□□ -1.46
NPLOC4-214ENST00000573876 H0YAA0 97 aa5.94□□□□□ -1.46
NPLOC4-214ENST00000573876 ADM2Q7Z4H4 148 aa5.94□□□□□ -1.46
NPLOC4-214ENST00000573876 LCE2BO14633 110 aa5.88□□□□□ -1.47
NPLOC4-214ENST00000573876 CRIPTQ9P021 101 aa5.87□□□□□ -1.47
NPLOC4-214ENST00000573876 KRTAP3-2Q9BYR7 98 aa5.86□□□□□ -1.47
NPLOC4-214ENST00000573876 P0C880 135 aa5.85□□□□□ -1.47
NPLOC4-214ENST00000573876 KRTAP9-7A8MTY7 169 aa5.84□□□□□ -1.47
NPLOC4-214ENST00000573876 SSPOA2VEC9 5147 aa5.83□□□□□ -1.48
NPLOC4-214ENST00000573876 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
NPLOC4-214ENST00000573876 SERP1Q9Y6X1 66 aa5.81□□□□□ -1.48
NPLOC4-214ENST00000573876 SPRR2GQ9BYE4 73 aa5.8□□□□□ -1.48
NPLOC4-214ENST00000573876 SEC61GP60059 68 aa5.79□□□□□ -1.48
NPLOC4-214ENST00000573876 R4GN34 69 aa5.75□□□□□ -1.49
NPLOC4-214ENST00000573876 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.74□□□□□ -1.49
NPLOC4-214ENST00000573876 Q5VV11 94 aa5.74□□□□□ -1.49
NPLOC4-214ENST00000573876 M0QZ58 72 aa5.73□□□□□ -1.49
NPLOC4-214ENST00000573876 A0A1B0GU69 56 aa5.71□□□□□ -1.5
NPLOC4-214ENST00000573876 KRTAP19-8Q3LI54 63 aa5.71□□□□□ -1.5
NPLOC4-214ENST00000573876 LINC01558Q9Y6Z2 57 aa5.68□□□□□ -1.5
NPLOC4-214ENST00000573876 FCGBPQ9Y6R7 5405 aaPredicted RBP5.67□□□□□ -1.5
NPLOC4-214ENST00000573876 A0A1B0GU33 70 aa5.65□□□□□ -1.5
NPLOC4-214ENST00000573876 MT1BP07438 61 aa5.65□□□□□ -1.5
NPLOC4-214ENST00000573876 RPS28P62857 69 aaKnown RBP5.65□□□□□ -1.5
NPLOC4-214ENST00000573876 KRTAP19-6Q3LI70 58 aa5.65□□□□□ -1.5
NPLOC4-214ENST00000573876 LINC01554Q52M75 96 aa5.65□□□□□ -1.5
NPLOC4-214ENST00000573876 PRR15LQ9BU68 103 aa5.64□□□□□ -1.51
NPLOC4-214ENST00000573876 SMIM26A0A096LP01 95 aa5.62□□□□□ -1.51
NPLOC4-214ENST00000573876 KRTAP13-4Q3LI77 160 aa5.61□□□□□ -1.51
NPLOC4-214ENST00000573876 SPATA8Q6RVD6 105 aa5.59□□□□□ -1.51
NPLOC4-214ENST00000573876 PLAC4Q8WY50 150 aa5.59□□□□□ -1.51
NPLOC4-214ENST00000573876 V9GYY9 64 aa5.59□□□□□ -1.51
NPLOC4-214ENST00000573876 Q1T7F1 81 aa5.58□□□□□ -1.52
NPLOC4-214ENST00000573876 A6NN06 94 aa5.54□□□□□ -1.52
NPLOC4-214ENST00000573876 PSPHP1O15172 72 aa5.53□□□□□ -1.52
NPLOC4-214ENST00000573876 A0A0D9SG42 100 aa5.52□□□□□ -1.53
NPLOC4-214ENST00000573876 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
NPLOC4-214ENST00000573876 UQCR11O14957 56 aa5.48□□□□□ -1.53
NPLOC4-214ENST00000573876 MACF1Q9UPN3 7388 aaKnown RBP5.48□□□□□ -1.53
NPLOC4-214ENST00000573876 PRO2289Q9P1D8 64 aa5.46□□□□□ -1.54
NPLOC4-214ENST00000573876 A8MU10 97 aa5.45□□□□□ -1.54
NPLOC4-214ENST00000573876 SYNE2Q8WXH0 6885 aaKnown RBP5.43□□□□□ -1.54
NPLOC4-214ENST00000573876 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
NPLOC4-214ENST00000573876 KRTAP12-1P59990 96 aa5.39□□□□□ -1.55
NPLOC4-214ENST00000573876 MIR22HGQ0VDD5 57 aa5.39□□□□□ -1.55
NPLOC4-214ENST00000573876 MT1XP80297 61 aa5.37□□□□□ -1.55
NPLOC4-214ENST00000573876 KRTAP12-2P59991 146 aa5.36□□□□□ -1.55
NPLOC4-214ENST00000573876 CAMK2N1Q7Z7J9 78 aa5.36□□□□□ -1.55
NPLOC4-214ENST00000573876 A6NED7 52 aa5.35□□□□□ -1.55
NPLOC4-214ENST00000573876 K7ERS5 55 aa5.21□□□□□ -1.58
NPLOC4-214ENST00000573876 KMT2DO14686 5537 aa5.2□□□□□ -1.58
NPLOC4-214ENST00000573876 KRTAP6-3Q3LI67 103 aa5.19□□□□□ -1.58
NPLOC4-214ENST00000573876 CDC42SE1Q9NRR8 79 aa5.18□□□□□ -1.58
NPLOC4-214ENST00000573876 NEBP20929 6669 aa5.16□□□□□ -1.58
NPLOC4-214ENST00000573876 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.59
NPLOC4-214ENST00000573876 MUC12Q9UKN1 5478 aa5.15□□□□□ -1.59
NPLOC4-214ENST00000573876 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
NPLOC4-214ENST00000573876 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
NPLOC4-214ENST00000573876 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.59
NPLOC4-214ENST00000573876 KRTAP4-8A0A0G2JLE6 195 aa5.05□□□□□ -1.6
NPLOC4-214ENST00000573876 KRTAP4-8Q9BYQ9 185 aa5.05□□□□□ -1.6
NPLOC4-214ENST00000573876 MDN1Q9NU22 5596 aa5.04□□□□□ -1.6
NPLOC4-214ENST00000573876 KRTAP5-9P26371 169 aa5.04□□□□□ -1.6
NPLOC4-214ENST00000573876 BRK1Q8WUW1 75 aa5.04□□□□□ -1.6
NPLOC4-214ENST00000573876 TNP1P09430 55 aa5.03□□□□□ -1.6
NPLOC4-214ENST00000573876 KRTAP20-1Q3LI63 56 aa5.03□□□□□ -1.6
NPLOC4-214ENST00000573876 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
NPLOC4-214ENST00000573876 ROMO1P60602 79 aa4.93□□□□□ -1.62
NPLOC4-214ENST00000573876 KRTAP25-1Q3LHN0 102 aa4.92□□□□□ -1.62
NPLOC4-214ENST00000573876 LCE3AQ5TA76 89 aa4.87□□□□□ -1.63
NPLOC4-214ENST00000573876 SPRR2EP22531 72 aa4.86□□□□□ -1.63
NPLOC4-214ENST00000573876 SPRR2BP35325 72 aa4.86□□□□□ -1.63
NPLOC4-214ENST00000573876 SPRR2AP35326 72 aa4.86□□□□□ -1.63
NPLOC4-214ENST00000573876 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
NPLOC4-214ENST00000573876 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
NPLOC4-214ENST00000573876 KRTAP19-7Q3SYF9 63 aa4.79□□□□□ -1.64
NPLOC4-214ENST00000573876 PMAIP1Q13794 54 aa4.78□□□□□ -1.64
NPLOC4-214ENST00000573876 MT1EP04732 61 aa4.76□□□□□ -1.65
NPLOC4-214ENST00000573876 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
NPLOC4-214ENST00000573876 PRO0628Q9UI54 55 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms