RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 ANAPC13Q9BS18 74 aa6.94□□□□□ -1.3
NPLOC4-209ENST00000572760 KRTAP9-8Q9BYQ0 159 aa6.94□□□□□ -1.3
NPLOC4-209ENST00000572760 DMAC1Q96GE9 116 aa6.92□□□□□ -1.3
NPLOC4-209ENST00000572760 NDUFC1O43677 76 aa6.9□□□□□ -1.3
NPLOC4-209ENST00000572760 MT2AP02795 61 aa6.9□□□□□ -1.3
NPLOC4-209ENST00000572760 KRTAP10-10P60014 251 aa6.88□□□□□ -1.31
NPLOC4-209ENST00000572760 ACYP2P14621 99 aa6.87□□□□□ -1.31
NPLOC4-209ENST00000572760 SPANXA2-OT1Q8N9U9 137 aa6.85□□□□□ -1.31
NPLOC4-209ENST00000572760 MT1FP04733 61 aa6.84□□□□□ -1.31
NPLOC4-209ENST00000572760 KRTAP9-2Q9BYQ4 174 aa6.84□□□□□ -1.31
NPLOC4-209ENST00000572760 CHKB-CPT1BH3BT56 60 aa6.78□□□□□ -1.32
NPLOC4-209ENST00000572760 CCDC179H3BU77 68 aa6.75□□□□□ -1.33
NPLOC4-209ENST00000572760 H7BZZ5 65 aa6.74□□□□□ -1.33
NPLOC4-209ENST00000572760 SPTSSBQ8NFR3 76 aa6.74□□□□□ -1.33
NPLOC4-209ENST00000572760 CYSTM1Q9H1C7 97 aa6.74□□□□□ -1.33
NPLOC4-209ENST00000572760 KRTAP9-3Q9BYQ3 159 aa6.71□□□□□ -1.34
NPLOC4-209ENST00000572760 H0YAA0 97 aa6.68□□□□□ -1.34
NPLOC4-209ENST00000572760 ADM2Q7Z4H4 148 aa6.67□□□□□ -1.34
NPLOC4-209ENST00000572760 COA5Q86WW8 74 aa6.65□□□□□ -1.34
NPLOC4-209ENST00000572760 CRIPTQ9P021 101 aa6.6□□□□□ -1.35
NPLOC4-209ENST00000572760 ATP5EP56381 51 aaPredicted RBP6.58□□□□□ -1.36
NPLOC4-209ENST00000572760 KRTAP9-6A0A140TA67 174 aa6.57□□□□□ -1.36
NPLOC4-209ENST00000572760 P0C880 135 aa6.53□□□□□ -1.36
NPLOC4-209ENST00000572760 TMEM258P61165 79 aa6.53□□□□□ -1.36
NPLOC4-209ENST00000572760 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
NPLOC4-209ENST00000572760 CRCT1Q9UGL9 99 aa6.53□□□□□ -1.36
NPLOC4-209ENST00000572760 SPRR2GQ9BYE4 73 aa6.52□□□□□ -1.37
NPLOC4-209ENST00000572760 SVIPQ8NHG7 77 aa6.51□□□□□ -1.37
NPLOC4-209ENST00000572760 FSIP2Q5CZC0 6907 aa6.49□□□□□ -1.37
NPLOC4-209ENST00000572760 R4GN34 69 aa6.49□□□□□ -1.37
NPLOC4-209ENST00000572760 SEC61GP60059 68 aa6.46□□□□□ -1.38
NPLOC4-209ENST00000572760 M0QZ58 72 aa6.45□□□□□ -1.38
NPLOC4-209ENST00000572760 RPS28P62857 69 aaKnown RBP6.45□□□□□ -1.38
NPLOC4-209ENST00000572760 Q5VV11 94 aa6.45□□□□□ -1.38
NPLOC4-209ENST00000572760 SERP1Q9Y6X1 66 aa6.44□□□□□ -1.38
NPLOC4-209ENST00000572760 KRTAP19-8Q3LI54 63 aa6.42□□□□□ -1.38
NPLOC4-209ENST00000572760 USH2AO75445 5202 aa6.42□□□□□ -1.38
NPLOC4-209ENST00000572760 MT1BP07438 61 aa6.36□□□□□ -1.39
NPLOC4-209ENST00000572760 LINC01554Q52M75 96 aa6.36□□□□□ -1.39
NPLOC4-209ENST00000572760 A0A1B0GU69 56 aa6.34□□□□□ -1.39
NPLOC4-209ENST00000572760 KRTAP19-6Q3LI70 58 aa6.32□□□□□ -1.4
NPLOC4-209ENST00000572760 PLAC4Q8WY50 150 aa6.3□□□□□ -1.4
NPLOC4-209ENST00000572760 SSPOA2VEC9 5147 aa6.29□□□□□ -1.4
NPLOC4-209ENST00000572760 PRR15LQ9BU68 103 aa6.28□□□□□ -1.4
NPLOC4-209ENST00000572760 A0A1B0GU33 70 aa6.27□□□□□ -1.41
NPLOC4-209ENST00000572760 H3BS24 57 aa6.27□□□□□ -1.41
NPLOC4-209ENST00000572760 LINC01558Q9Y6Z2 57 aa6.24□□□□□ -1.41
NPLOC4-209ENST00000572760 A6NN06 94 aa6.23□□□□□ -1.41
NPLOC4-209ENST00000572760 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
NPLOC4-209ENST00000572760 SPATA8Q6RVD6 105 aa6.18□□□□□ -1.42
NPLOC4-209ENST00000572760 SMIM26A0A096LP01 95 aa6.16□□□□□ -1.42
NPLOC4-209ENST00000572760 A0A0D9SG42 100 aa6.16□□□□□ -1.42
NPLOC4-209ENST00000572760 KRTAP10-5P60370 271 aa6.16□□□□□ -1.42
NPLOC4-209ENST00000572760 V9GYY9 64 aa6.14□□□□□ -1.43
NPLOC4-209ENST00000572760 PRO2289Q9P1D8 64 aa6.13□□□□□ -1.43
NPLOC4-209ENST00000572760 FCGBPQ9Y6R7 5405 aaPredicted RBP6.11□□□□□ -1.43
NPLOC4-209ENST00000572760 Q1T7F1 81 aa6.07□□□□□ -1.44
NPLOC4-209ENST00000572760 SPINT4Q6UDR6 99 aa6.06□□□□□ -1.44
NPLOC4-209ENST00000572760 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
NPLOC4-209ENST00000572760 UQCR11O14957 56 aa6.05□□□□□ -1.44
NPLOC4-209ENST00000572760 MT1XP80297 61 aa6.05□□□□□ -1.44
NPLOC4-209ENST00000572760 CAMK2N1Q7Z7J9 78 aa6.05□□□□□ -1.44
NPLOC4-209ENST00000572760 PSPHP1O15172 72 aa6.04□□□□□ -1.44
NPLOC4-209ENST00000572760 A8MU10 97 aa6.02□□□□□ -1.45
NPLOC4-209ENST00000572760 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
NPLOC4-209ENST00000572760 PRO0628Q9UI54 55 aa5.97□□□□□ -1.45
NPLOC4-209ENST00000572760 KRTAP12-2P59991 146 aa5.94□□□□□ -1.46
NPLOC4-209ENST00000572760 MIR22HGQ0VDD5 57 aa5.94□□□□□ -1.46
NPLOC4-209ENST00000572760 MACF1Q9UPN3 7388 aaKnown RBP5.94□□□□□ -1.46
NPLOC4-209ENST00000572760 KRTAP9-7A8MTY7 169 aa5.89□□□□□ -1.47
NPLOC4-209ENST00000572760 A6NED7 52 aa5.88□□□□□ -1.47
NPLOC4-209ENST00000572760 BRK1Q8WUW1 75 aa5.83□□□□□ -1.48
NPLOC4-209ENST00000572760 K7ERS5 55 aa5.82□□□□□ -1.48
NPLOC4-209ENST00000572760 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
NPLOC4-209ENST00000572760 KRTAP10-7P60409 375 aaPredicted RBP5.8□□□□□ -1.48
NPLOC4-209ENST00000572760 KRTAP6-3Q3LI67 103 aa5.78□□□□□ -1.48
NPLOC4-209ENST00000572760 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
NPLOC4-209ENST00000572760 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
NPLOC4-209ENST00000572760 KRTAP4-8A0A0G2JLE6 195 aa5.69□□□□□ -1.5
NPLOC4-209ENST00000572760 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
NPLOC4-209ENST00000572760 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
NPLOC4-209ENST00000572760 TNP1P09430 55 aa5.66□□□□□ -1.5
NPLOC4-209ENST00000572760 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
NPLOC4-209ENST00000572760 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
NPLOC4-209ENST00000572760 KMT2DO14686 5537 aa5.62□□□□□ -1.51
NPLOC4-209ENST00000572760 SPRR2FQ96RM1 72 aa5.62□□□□□ -1.51
NPLOC4-209ENST00000572760 PMAIP1Q13794 54 aa5.58□□□□□ -1.52
NPLOC4-209ENST00000572760 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
NPLOC4-209ENST00000572760 KRTAP4-6Q9BYQ5 205 aa5.51□□□□□ -1.53
NPLOC4-209ENST00000572760 KRTAP25-1Q3LHN0 102 aa5.5□□□□□ -1.53
NPLOC4-209ENST00000572760 KTN1-AS1Q86SY8 53 aa5.47□□□□□ -1.53
NPLOC4-209ENST00000572760 SPRR2EP22531 72 aa5.45□□□□□ -1.54
NPLOC4-209ENST00000572760 SPRR2BP35325 72 aa5.45□□□□□ -1.54
NPLOC4-209ENST00000572760 SPRR2AP35326 72 aa5.45□□□□□ -1.54
NPLOC4-209ENST00000572760 LCE3AQ5TA76 89 aa5.45□□□□□ -1.54
NPLOC4-209ENST00000572760 ROMO1P60602 79 aa5.44□□□□□ -1.54
NPLOC4-209ENST00000572760 NEBP20929 6669 aa5.42□□□□□ -1.54
NPLOC4-209ENST00000572760 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
NPLOC4-209ENST00000572760 KRTAP19-5Q3LI72 72 aa5.4□□□□□ -1.54
NPLOC4-209ENST00000572760 KRTAP19-7Q3SYF9 63 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms