RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 A0A0D9SG42 100 aa9.04□□□□□ -0.96
VAC14-210ENST00000568548 Q5VSD8 79 aa9.02□□□□□ -0.97
VAC14-210ENST00000568548 FAT3Q8TDW7 4589 aa9□□□□□ -0.97
VAC14-210ENST00000568548 COX6B2Q6YFQ2 88 aa8.99□□□□□ -0.97
VAC14-210ENST00000568548 RYR1P21817 5038 aa8.98□□□□□ -0.97
VAC14-210ENST00000568548 LPAP08519 4548 aa8.96□□□□□ -0.98
VAC14-210ENST00000568548 KRTAP25-1Q3LHN0 102 aa8.94□□□□□ -0.98
VAC14-210ENST00000568548 H3BS24 57 aa8.94□□□□□ -0.98
VAC14-210ENST00000568548 TNXBP22105 4242 aa8.93□□□□□ -0.98
VAC14-210ENST00000568548 KRTAP17-1Q9BYP8 105 aa8.92□□□□□ -0.98
VAC14-210ENST00000568548 KIAA1109Q2LD37 5005 aa8.92□□□□□ -0.98
VAC14-210ENST00000568548 K7ERS5 55 aa8.91□□□□□ -0.98
VAC14-210ENST00000568548 KRTAP10-8P60410 259 aa8.89□□□□□ -0.99
VAC14-210ENST00000568548 EPPK1P58107 5090 aaKnown RBP8.85□□□□□ -0.99
VAC14-210ENST00000568548 KRTAP13-4Q3LI77 160 aa8.84□□□□□ -0.99
VAC14-210ENST00000568548 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
VAC14-210ENST00000568548 LRP2P98164 4655 aa8.79□□□□□ -1
VAC14-210ENST00000568548 KRTAP10-6P60371 365 aaPredicted RBP8.77□□□□□ -1.01
VAC14-210ENST00000568548 ROMO1P60602 79 aa8.75□□□□□ -1.01
VAC14-210ENST00000568548 C10orf95Q9H7T3 257 aa8.75□□□□□ -1.01
VAC14-210ENST00000568548 P0C880 135 aa8.75□□□□□ -1.01
VAC14-210ENST00000568548 RPL37P61927 97 aaKnown RBP8.73□□□□□ -1.01
VAC14-210ENST00000568548 XP32Q5T750 250 aa8.7□□□□□ -1.02
VAC14-210ENST00000568548 MT1HL1P0DM35 61 aa8.7□□□□□ -1.02
VAC14-210ENST00000568548 S4R3F8 94 aa8.7□□□□□ -1.02
VAC14-210ENST00000568548 KRTAP3-2Q9BYR7 98 aa8.68□□□□□ -1.02
VAC14-210ENST00000568548 SPINT4Q6UDR6 99 aa8.66□□□□□ -1.02
VAC14-210ENST00000568548 TPRXLQ17RH7 258 aa8.62□□□□□ -1.03
VAC14-210ENST00000568548 ABCA13Q86UQ4 5058 aa8.6□□□□□ -1.03
VAC14-210ENST00000568548 KRTAP4-5Q9BYR2 181 aa8.59□□□□□ -1.03
VAC14-210ENST00000568548 KRTAP12-2P59991 146 aa8.56□□□□□ -1.04
VAC14-210ENST00000568548 KRTAP12-1P59990 96 aa8.38□□□□□ -1.07
VAC14-210ENST00000568548 MUC2Q02817 5179 aa8.38□□□□□ -1.07
VAC14-210ENST00000568548 HERC2O95714 4834 aa8.35□□□□□ -1.07
VAC14-210ENST00000568548 NDUFAF8A1L188 74 aa8.32□□□□□ -1.08
VAC14-210ENST00000568548 J3QL48 77 aa8.3□□□□□ -1.08
VAC14-210ENST00000568548 M0QZ58 72 aa8.28□□□□□ -1.08
VAC14-210ENST00000568548 BIRC6Q9NR09 4857 aa8.28□□□□□ -1.08
VAC14-210ENST00000568548 LORP23490 312 aaPredicted RBP8.19□□□□□ -1.1
VAC14-210ENST00000568548 R4GN34 69 aa8.19□□□□□ -1.1
VAC14-210ENST00000568548 KRTAP15-1Q3LI76 137 aa8.15□□□□□ -1.1
VAC14-210ENST00000568548 A0A0A0MQY5 61 aa8.14□□□□□ -1.11
VAC14-210ENST00000568548 SEC61BP60468 96 aaKnown RBP8.1□□□□□ -1.11
VAC14-210ENST00000568548 KRTAP4-1Q9BYQ7 146 aa8.06□□□□□ -1.12
VAC14-210ENST00000568548 MUC17Q685J3 4493 aa8.06□□□□□ -1.12
VAC14-210ENST00000568548 PCLOQ9Y6V0 5065 aa8.02□□□□□ -1.12
VAC14-210ENST00000568548 HERC1Q15751 4861 aa7.98□□□□□ -1.13
VAC14-210ENST00000568548 FAT4Q6V0I7 4981 aa7.91□□□□□ -1.14
VAC14-210ENST00000568548 CAMK2N1Q7Z7J9 78 aa7.89□□□□□ -1.15
VAC14-210ENST00000568548 HMCN2Q8NDA2 5059 aa7.84□□□□□ -1.15
VAC14-210ENST00000568548 PLAC4Q8WY50 150 aa7.83□□□□□ -1.16
VAC14-210ENST00000568548 KRTAP19-2Q3LHN2 52 aa7.78□□□□□ -1.16
VAC14-210ENST00000568548 RNF213Q63HN8 5207 aa7.71□□□□□ -1.17
VAC14-210ENST00000568548 FLGP20930 4061 aaPredicted RBP7.65□□□□□ -1.19
VAC14-210ENST00000568548 LUZP6Q538Z0 58 aa7.55□□□□□ -1.2
VAC14-210ENST00000568548 UBR4Q5T4S7 5183 aa7.52□□□□□ -1.21
VAC14-210ENST00000568548 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
VAC14-210ENST00000568548 TNP1P09430 55 aa7.42□□□□□ -1.22
VAC14-210ENST00000568548 PP632Q6XCG6 107 aa7.42□□□□□ -1.22
VAC14-210ENST00000568548 M0R2T5 61 aa7.37□□□□□ -1.23
VAC14-210ENST00000568548 MT1HP80294 61 aa7.31□□□□□ -1.24
VAC14-210ENST00000568548 KRTAP19-1Q8IUB9 90 aa7.18□□□□□ -1.26
VAC14-210ENST00000568548 KRTAP10-10P60014 251 aa7.14□□□□□ -1.27
VAC14-210ENST00000568548 LCE3AQ5TA76 89 aa7.11□□□□□ -1.27
VAC14-210ENST00000568548 MT2AP02795 61 aa7.1□□□□□ -1.27
VAC14-210ENST00000568548 MT1FP04733 61 aa7.09□□□□□ -1.27
VAC14-210ENST00000568548 SPRR2GQ9BYE4 73 aa7.09□□□□□ -1.27
VAC14-210ENST00000568548 KRTAP9-8Q9BYQ0 159 aa7.08□□□□□ -1.28
VAC14-210ENST00000568548 SPRR5A0A1B0GTR4 108 aa7.01□□□□□ -1.29
VAC14-210ENST00000568548 USH2AO75445 5202 aa7.01□□□□□ -1.29
VAC14-210ENST00000568548 KRTAP23-1A1A580 65 aa7□□□□□ -1.29
VAC14-210ENST00000568548 KMT2DO14686 5537 aa6.94□□□□□ -1.3
VAC14-210ENST00000568548 KRTAP19-8Q3LI54 63 aa6.83□□□□□ -1.32
VAC14-210ENST00000568548 KRTAP9-3Q9BYQ3 159 aa6.8□□□□□ -1.32
VAC14-210ENST00000568548 KRTAP10-5P60370 271 aa6.78□□□□□ -1.32
VAC14-210ENST00000568548 MT1BP07438 61 aa6.77□□□□□ -1.33
VAC14-210ENST00000568548 MT1XP80297 61 aa6.77□□□□□ -1.33
VAC14-210ENST00000568548 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
VAC14-210ENST00000568548 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
VAC14-210ENST00000568548 KRTAP12-3P60328 96 aa6.69□□□□□ -1.34
VAC14-210ENST00000568548 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
VAC14-210ENST00000568548 KRTAP8-1Q8IUC2 63 aa6.67□□□□□ -1.34
VAC14-210ENST00000568548 LCE2BO14633 110 aa6.59□□□□□ -1.35
VAC14-210ENST00000568548 FSIP2Q5CZC0 6907 aa6.56□□□□□ -1.36
VAC14-210ENST00000568548 PRO2289Q9P1D8 64 aa6.46□□□□□ -1.38
VAC14-210ENST00000568548 KRTAP4-8A0A0G2JLE6 195 aa6.45□□□□□ -1.38
VAC14-210ENST00000568548 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
VAC14-210ENST00000568548 KRTAP19-5Q3LI72 72 aa6.44□□□□□ -1.38
VAC14-210ENST00000568548 INE1O15225 51 aa6.3□□□□□ -1.4
VAC14-210ENST00000568548 KRTAP4-7Q9BYR0 210 aa6.3□□□□□ -1.4
VAC14-210ENST00000568548 LCE3CQ5T5A8 94 aa6.25□□□□□ -1.41
VAC14-210ENST00000568548 KRTAP9-6A8MVA2 160 aa6.22□□□□□ -1.41
VAC14-210ENST00000568548 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
VAC14-210ENST00000568548 DSTQ03001 7570 aaKnown RBP6.09□□□□□ -1.43
VAC14-210ENST00000568548 MUC12Q9UKN1 5478 aa6.03□□□□□ -1.44
VAC14-210ENST00000568548 KRTAP19-7Q3SYF9 63 aa6.03□□□□□ -1.44
VAC14-210ENST00000568548 KRTAP19-6Q3LI70 58 aa6.02□□□□□ -1.45
VAC14-210ENST00000568548 FCGBPQ9Y6R7 5405 aaPredicted RBP5.97□□□□□ -1.45
VAC14-210ENST00000568548 LCE2DQ5TA82 110 aaPredicted RBP5.91□□□□□ -1.46
VAC14-210ENST00000568548 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 239 ms