RNA–Protein interactions for RNA: ENST00000567869.1

HERC2-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 3,523 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-209ENST00000567869 COX6B2Q6YFQ2 88 aa4.72□□□□□ -1.65
HERC2-209ENST00000567869 C10orf95Q9H7T3 257 aa4.72□□□□□ -1.65
HERC2-209ENST00000567869 KMT2CQ8NEZ4 4911 aaKnown RBP4.7□□□□□ -1.66
HERC2-209ENST00000567869 A0A1B0GVY2 172 aa4.68□□□□□ -1.66
HERC2-209ENST00000567869 RYR2Q92736 4967 aa4.66□□□□□ -1.66
HERC2-209ENST00000567869 KRTAP13-4Q3LI77 160 aa4.66□□□□□ -1.66
HERC2-209ENST00000567869 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
HERC2-209ENST00000567869 KRTAP3-2Q9BYR7 98 aa4.66□□□□□ -1.66
HERC2-209ENST00000567869 APOBP04114 4563 aaKnown RBP4.65□□□□□ -1.66
HERC2-209ENST00000567869 KRTAP10-6P60371 365 aaPredicted RBP4.64□□□□□ -1.67
HERC2-209ENST00000567869 RPL37P61927 97 aaKnown RBP4.63□□□□□ -1.67
HERC2-209ENST00000567869 PKHD1L1Q86WI1 4243 aa4.61□□□□□ -1.67
HERC2-209ENST00000567869 MYCBP2O75592 4640 aa4.6□□□□□ -1.67
HERC2-209ENST00000567869 KRTAP10-4P60372 401 aaPredicted RBP4.59□□□□□ -1.67
HERC2-209ENST00000567869 XP32Q5T750 250 aa4.59□□□□□ -1.68
HERC2-209ENST00000567869 RYR3Q15413 4870 aa4.55□□□□□ -1.68
HERC2-209ENST00000567869 LRP1Q07954 4544 aaKnown RBP4.54□□□□□ -1.68
HERC2-209ENST00000567869 RPS29P62273 56 aaKnown RBP4.53□□□□□ -1.68
HERC2-209ENST00000567869 KRTAP3-3Q9BYR6 98 aa4.53□□□□□ -1.68
HERC2-209ENST00000567869 KRTAP12-2P59991 146 aa4.51□□□□□ -1.69
HERC2-209ENST00000567869 Q5VSD8 79 aa4.51□□□□□ -1.69
HERC2-209ENST00000567869 KIAA1109Q2LD37 5005 aa4.5□□□□□ -1.69
HERC2-209ENST00000567869 S4R3F8 94 aa4.5□□□□□ -1.69
HERC2-209ENST00000567869 HSPG2P98160 4391 aa4.5□□□□□ -1.69
HERC2-209ENST00000567869 SEC61BP60468 96 aaKnown RBP4.49□□□□□ -1.69
HERC2-209ENST00000567869 KRTAP17-1Q9BYP8 105 aa4.48□□□□□ -1.69
HERC2-209ENST00000567869 TNXBP22105 4242 aa4.45□□□□□ -1.7
HERC2-209ENST00000567869 RYR1P21817 5038 aa4.45□□□□□ -1.7
HERC2-209ENST00000567869 KRTAP12-1P59990 96 aa4.45□□□□□ -1.7
HERC2-209ENST00000567869 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
HERC2-209ENST00000567869 FAT3Q8TDW7 4589 aa4.42□□□□□ -1.7
HERC2-209ENST00000567869 J3QL48 77 aa4.41□□□□□ -1.7
HERC2-209ENST00000567869 EPPK1P58107 5090 aaKnown RBP4.41□□□□□ -1.7
HERC2-209ENST00000567869 PLAC4Q8WY50 150 aa4.38□□□□□ -1.71
HERC2-209ENST00000567869 MT1HL1P0DM35 61 aa4.34□□□□□ -1.72
HERC2-209ENST00000567869 KRTAP4-5Q9BYR2 181 aa4.32□□□□□ -1.72
HERC2-209ENST00000567869 LPAP08519 4548 aa4.32□□□□□ -1.72
HERC2-209ENST00000567869 LRP2P98164 4655 aa4.25□□□□□ -1.73
HERC2-209ENST00000567869 M0QZ58 72 aa4.25□□□□□ -1.73
HERC2-209ENST00000567869 ABCA13Q86UQ4 5058 aa4.23□□□□□ -1.73
HERC2-209ENST00000567869 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
HERC2-209ENST00000567869 LCE2DQ5TA82 110 aaPredicted RBP4.21□□□□□ -1.74
HERC2-209ENST00000567869 R4GN34 69 aa4.2□□□□□ -1.74
HERC2-209ENST00000567869 PRO2289Q9P1D8 64 aa4.17□□□□□ -1.74
HERC2-209ENST00000567869 HERC2O95714 4834 aa4.16□□□□□ -1.74
HERC2-209ENST00000567869 CAMK2N1Q7Z7J9 78 aa4.16□□□□□ -1.74
HERC2-209ENST00000567869 BIRC6Q9NR09 4857 aa4.07□□□□□ -1.76
HERC2-209ENST00000567869 PP632Q6XCG6 107 aa4.05□□□□□ -1.76
HERC2-209ENST00000567869 LORP23490 312 aaPredicted RBP4.04□□□□□ -1.76
HERC2-209ENST00000567869 KRTAP4-1Q9BYQ7 146 aa4.03□□□□□ -1.76
HERC2-209ENST00000567869 MUC17Q685J3 4493 aa3.99□□□□□ -1.77
HERC2-209ENST00000567869 HERC1Q15751 4861 aa3.99□□□□□ -1.77
HERC2-209ENST00000567869 MUC2Q02817 5179 aa3.98□□□□□ -1.77
HERC2-209ENST00000567869 INE1O15225 51 aa3.96□□□□□ -1.77
HERC2-209ENST00000567869 PCLOQ9Y6V0 5065 aa3.96□□□□□ -1.78
HERC2-209ENST00000567869 M0R2T5 61 aa3.93□□□□□ -1.78
HERC2-209ENST00000567869 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
HERC2-209ENST00000567869 KRTAP23-1A1A580 65 aa3.91□□□□□ -1.78
HERC2-209ENST00000567869 HMCN2Q8NDA2 5059 aa3.87□□□□□ -1.79
HERC2-209ENST00000567869 KRTAP19-2Q3LHN2 52 aa3.87□□□□□ -1.79
HERC2-209ENST00000567869 TNP1P09430 55 aa3.84□□□□□ -1.79
HERC2-209ENST00000567869 FAT4Q6V0I7 4981 aa3.82□□□□□ -1.8
HERC2-209ENST00000567869 RNF213Q63HN8 5207 aa3.79□□□□□ -1.8
HERC2-209ENST00000567869 UBR4Q5T4S7 5183 aa3.76□□□□□ -1.81
HERC2-209ENST00000567869 LCE2CQ5TA81 110 aa3.72□□□□□ -1.81
HERC2-209ENST00000567869 KRTAP10-10P60014 251 aa3.66□□□□□ -1.82
HERC2-209ENST00000567869 MT1HP80294 61 aa3.64□□□□□ -1.83
HERC2-209ENST00000567869 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
HERC2-209ENST00000567869 LCE2BO14633 110 aa3.56□□□□□ -1.84
HERC2-209ENST00000567869 MT1FP04733 61 aa3.55□□□□□ -1.84
HERC2-209ENST00000567869 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
HERC2-209ENST00000567869 MT2AP02795 61 aa3.55□□□□□ -1.84
HERC2-209ENST00000567869 KRTAP19-1Q8IUB9 90 aa3.55□□□□□ -1.84
HERC2-209ENST00000567869 KRTAP9-8Q9BYQ0 159 aa3.53□□□□□ -1.84
HERC2-209ENST00000567869 SPRR2GQ9BYE4 73 aa3.52□□□□□ -1.85
HERC2-209ENST00000567869 KRTAP8-1Q8IUC2 63 aa3.49□□□□□ -1.85
HERC2-209ENST00000567869 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
HERC2-209ENST00000567869 KRTAP10-5P60370 271 aa3.39□□□□□ -1.87
HERC2-209ENST00000567869 MT1BP07438 61 aa3.39□□□□□ -1.87
HERC2-209ENST00000567869 KRTAP19-8Q3LI54 63 aa3.38□□□□□ -1.87
HERC2-209ENST00000567869 KRTAP9-3Q9BYQ3 159 aa3.38□□□□□ -1.87
HERC2-209ENST00000567869 LCE2AQ5TA79 106 aaPredicted RBP3.35□□□□□ -1.87
HERC2-209ENST00000567869 USH2AO75445 5202 aa3.33□□□□□ -1.88
HERC2-209ENST00000567869 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
HERC2-209ENST00000567869 MT1XP80297 61 aa3.32□□□□□ -1.88
HERC2-209ENST00000567869 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
HERC2-209ENST00000567869 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
HERC2-209ENST00000567869 LOC100996750A0A140TA64 210 aa3.31□□□□□ -1.88
HERC2-209ENST00000567869 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
HERC2-209ENST00000567869 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
HERC2-209ENST00000567869 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
HERC2-209ENST00000567869 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
HERC2-209ENST00000567869 KMT2DO14686 5537 aa3.18□□□□□ -1.9
HERC2-209ENST00000567869 KRTAP19-5Q3LI72 72 aa3.18□□□□□ -1.9
HERC2-209ENST00000567869 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
HERC2-209ENST00000567869 KRTAP4-8A0A0G2JLE6 195 aa3.13□□□□□ -1.91
HERC2-209ENST00000567869 KRTAP4-8Q9BYQ9 185 aa3.13□□□□□ -1.91
HERC2-209ENST00000567869 KRTAP4-7Q9BYR0 210 aa3.11□□□□□ -1.91
HERC2-209ENST00000567869 SSPOA2VEC9 5147 aa3.09□□□□□ -1.92
HERC2-209ENST00000567869 CRCT1Q9UGL9 99 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms