RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 FAM236AA0A1B0GUQ0 79 aa5.98□□□□□ -1.45
SF3B3-208ENST00000567250 FAM236BA0A1B0GV22 79 aa5.98□□□□□ -1.45
SF3B3-208ENST00000567250 SMIM20Q8N5G0 67 aa5.98□□□□□ -1.45
SF3B3-208ENST00000567250 H3BPC8 53 aa5.97□□□□□ -1.45
SF3B3-208ENST00000567250 C1orf64Q8NEQ6 169 aa5.97□□□□□ -1.45
SF3B3-208ENST00000567250 LINC00208Q96KT6 92 aa5.97□□□□□ -1.45
SF3B3-208ENST00000567250 TRAV7A0A075B6U4 112 aa5.9□□□□□ -1.46
SF3B3-208ENST00000567250 KRTAP4-8A0A0G2JLE6 195 aa5.89□□□□□ -1.47
SF3B3-208ENST00000567250 S4R3F8 94 aa5.89□□□□□ -1.47
SF3B3-208ENST00000567250 A8MUN3 132 aa5.87□□□□□ -1.47
SF3B3-208ENST00000567250 KLKP1Q107X0 134 aa5.86□□□□□ -1.47
SF3B3-208ENST00000567250 LCE1DQ5T752 114 aa5.85□□□□□ -1.47
SF3B3-208ENST00000567250 KRTAP9-8Q9BYQ0 159 aa5.85□□□□□ -1.47
SF3B3-208ENST00000567250 MT2AP02795 61 aa5.82□□□□□ -1.48
SF3B3-208ENST00000567250 LCA10Q71F78 164 aa5.82□□□□□ -1.48
SF3B3-208ENST00000567250 CSAG1Q6PB30 78 aa5.81□□□□□ -1.48
SF3B3-208ENST00000567250 SERP2Q8N6R1 65 aa5.81□□□□□ -1.48
SF3B3-208ENST00000567250 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
SF3B3-208ENST00000567250 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
SF3B3-208ENST00000567250 MT1FP04733 61 aa5.77□□□□□ -1.49
SF3B3-208ENST00000567250 NDUFC1O43677 76 aa5.75□□□□□ -1.49
SF3B3-208ENST00000567250 SVIPQ8NHG7 77 aa5.75□□□□□ -1.49
SF3B3-208ENST00000567250 DMAC1Q96GE9 116 aa5.75□□□□□ -1.49
SF3B3-208ENST00000567250 C20orf197Q8N268 126 aa5.74□□□□□ -1.49
SF3B3-208ENST00000567250 SNURFQ9Y675 71 aa5.73□□□□□ -1.49
SF3B3-208ENST00000567250 COX7CP15954 63 aa5.7□□□□□ -1.5
SF3B3-208ENST00000567250 ACYP2P14621 99 aa5.68□□□□□ -1.5
SF3B3-208ENST00000567250 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
SF3B3-208ENST00000567250 SPANXA2-OT1Q8N9U9 137 aa5.67□□□□□ -1.5
SF3B3-208ENST00000567250 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
SF3B3-208ENST00000567250 ANAPC13Q9BS18 74 aa5.65□□□□□ -1.5
SF3B3-208ENST00000567250 H0YAA0 97 aa5.63□□□□□ -1.51
SF3B3-208ENST00000567250 KRTAP4-9Q9BYQ8 210 aa5.62□□□□□ -1.51
SF3B3-208ENST00000567250 SPTSSBQ8NFR3 76 aa5.61□□□□□ -1.51
SF3B3-208ENST00000567250 CHKB-CPT1BH3BT56 60 aa5.6□□□□□ -1.51
SF3B3-208ENST00000567250 CRCT1Q9UGL9 99 aa5.58□□□□□ -1.52
SF3B3-208ENST00000567250 CRIPTQ9P021 101 aa5.57□□□□□ -1.52
SF3B3-208ENST00000567250 PCP4P48539 62 aa5.56□□□□□ -1.52
SF3B3-208ENST00000567250 FSIP2Q5CZC0 6907 aa5.54□□□□□ -1.52
SF3B3-208ENST00000567250 ADM2Q7Z4H4 148 aa5.54□□□□□ -1.52
SF3B3-208ENST00000567250 H7BZZ5 65 aa5.53□□□□□ -1.52
SF3B3-208ENST00000567250 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
SF3B3-208ENST00000567250 SPRR2GQ9BYE4 73 aa5.5□□□□□ -1.53
SF3B3-208ENST00000567250 CYSTM1Q9H1C7 97 aa5.49□□□□□ -1.53
SF3B3-208ENST00000567250 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
SF3B3-208ENST00000567250 CCDC179H3BU77 68 aa5.47□□□□□ -1.53
SF3B3-208ENST00000567250 COA5Q86WW8 74 aa5.47□□□□□ -1.53
SF3B3-208ENST00000567250 Q5VV11 94 aa5.44□□□□□ -1.54
SF3B3-208ENST00000567250 USH2AO75445 5202 aa5.43□□□□□ -1.54
SF3B3-208ENST00000567250 ATP5EP56381 51 aaPredicted RBP5.43□□□□□ -1.54
SF3B3-208ENST00000567250 R4GN34 69 aa5.43□□□□□ -1.54
SF3B3-208ENST00000567250 P0C880 135 aa5.42□□□□□ -1.54
SF3B3-208ENST00000567250 KRTAP19-8Q3LI54 63 aa5.42□□□□□ -1.54
SF3B3-208ENST00000567250 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
SF3B3-208ENST00000567250 M0QZ58 72 aa5.38□□□□□ -1.55
SF3B3-208ENST00000567250 KRTAP19-6Q3LI70 58 aa5.38□□□□□ -1.55
SF3B3-208ENST00000567250 SSPOA2VEC9 5147 aa5.37□□□□□ -1.55
SF3B3-208ENST00000567250 MT1BP07438 61 aa5.35□□□□□ -1.55
SF3B3-208ENST00000567250 TMEM258P61165 79 aa5.35□□□□□ -1.55
SF3B3-208ENST00000567250 SEC61GP60059 68 aa5.34□□□□□ -1.55
SF3B3-208ENST00000567250 SERP1Q9Y6X1 66 aa5.31□□□□□ -1.56
SF3B3-208ENST00000567250 LINC01554Q52M75 96 aa5.27□□□□□ -1.57
SF3B3-208ENST00000567250 PLAC4Q8WY50 150 aa5.27□□□□□ -1.57
SF3B3-208ENST00000567250 A6NN06 94 aa5.25□□□□□ -1.57
SF3B3-208ENST00000567250 A0A1B0GU69 56 aa5.22□□□□□ -1.57
SF3B3-208ENST00000567250 KRTAP10-5P60370 271 aa5.21□□□□□ -1.58
SF3B3-208ENST00000567250 PRO2289Q9P1D8 64 aa5.2□□□□□ -1.58
SF3B3-208ENST00000567250 FCGBPQ9Y6R7 5405 aaPredicted RBP5.2□□□□□ -1.58
SF3B3-208ENST00000567250 PRR15LQ9BU68 103 aa5.18□□□□□ -1.58
SF3B3-208ENST00000567250 A0A1B0GU33 70 aa5.16□□□□□ -1.58
SF3B3-208ENST00000567250 KRTAP13-4Q3LI77 160 aa5.14□□□□□ -1.59
SF3B3-208ENST00000567250 LINC01558Q9Y6Z2 57 aa5.12□□□□□ -1.59
SF3B3-208ENST00000567250 MT1XP80297 61 aa5.09□□□□□ -1.59
SF3B3-208ENST00000567250 SPATA8Q6RVD6 105 aa5.09□□□□□ -1.59
SF3B3-208ENST00000567250 SMIM26A0A096LP01 95 aa5.06□□□□□ -1.6
SF3B3-208ENST00000567250 A0A0D9SG42 100 aa5.06□□□□□ -1.6
SF3B3-208ENST00000567250 V9GYY9 64 aa5.05□□□□□ -1.6
SF3B3-208ENST00000567250 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
SF3B3-208ENST00000567250 A0A0A0MQY5 61 aa5.04□□□□□ -1.6
SF3B3-208ENST00000567250 CAMK2N1Q7Z7J9 78 aa5.03□□□□□ -1.6
SF3B3-208ENST00000567250 UQCR11O14957 56 aa4.99□□□□□ -1.61
SF3B3-208ENST00000567250 SPINT4Q6UDR6 99 aa4.99□□□□□ -1.61
SF3B3-208ENST00000567250 KRTAP12-1P59990 96 aa4.96□□□□□ -1.62
SF3B3-208ENST00000567250 KRTAP12-2P59991 146 aa4.96□□□□□ -1.62
SF3B3-208ENST00000567250 Q1T7F1 81 aa4.96□□□□□ -1.62
SF3B3-208ENST00000567250 A8MU10 97 aa4.94□□□□□ -1.62
SF3B3-208ENST00000567250 KRTAP6-3Q3LI67 103 aa4.94□□□□□ -1.62
SF3B3-208ENST00000567250 RPS28P62857 69 aaKnown RBP4.93□□□□□ -1.62
SF3B3-208ENST00000567250 SYNE2Q8WXH0 6885 aaKnown RBP4.92□□□□□ -1.62
SF3B3-208ENST00000567250 PSPHP1O15172 72 aa4.9□□□□□ -1.63
SF3B3-208ENST00000567250 MIR22HGQ0VDD5 57 aa4.88□□□□□ -1.63
SF3B3-208ENST00000567250 KRTAP10-7P60409 375 aaPredicted RBP4.85□□□□□ -1.63
SF3B3-208ENST00000567250 KRTAP10-12P60413 245 aa4.85□□□□□ -1.63
SF3B3-208ENST00000567250 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
SF3B3-208ENST00000567250 KRTAP8-1Q8IUC2 63 aa4.83□□□□□ -1.64
SF3B3-208ENST00000567250 K7ERS5 55 aa4.8□□□□□ -1.64
SF3B3-208ENST00000567250 A6NED7 52 aa4.79□□□□□ -1.64
SF3B3-208ENST00000567250 SPRR2FQ96RM1 72 aa4.75□□□□□ -1.65
SF3B3-208ENST00000567250 TNP1P09430 55 aa4.71□□□□□ -1.66
SF3B3-208ENST00000567250 LCE1AQ5T7P2 110 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms