RNA–Protein interactions for RNA: ENST00000566349.5

KLHDC4-215, Transcript of kelch domain containing 4, humanhuman

TSL 2

Gene KLHDC4, Length 1,377 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-215ENST00000566349 CSAG1Q6PB30 78 aa8.27□□□□□ -1.09
KLHDC4-215ENST00000566349 MT2AP02795 61 aa8.25□□□□□ -1.09
KLHDC4-215ENST00000566349 SPANXA2-OT1Q8N9U9 137 aa8.25□□□□□ -1.09
KLHDC4-215ENST00000566349 CYSTM1Q9H1C7 97 aa8.24□□□□□ -1.09
KLHDC4-215ENST00000566349 NDUFC1O43677 76 aa8.22□□□□□ -1.09
KLHDC4-215ENST00000566349 ACYP2P14621 99 aa8.22□□□□□ -1.09
KLHDC4-215ENST00000566349 CCDC179H3BU77 68 aa8.21□□□□□ -1.1
KLHDC4-215ENST00000566349 H7BZZ5 65 aa8.2□□□□□ -1.1
KLHDC4-215ENST00000566349 MT1FP04733 61 aa8.2□□□□□ -1.1
KLHDC4-215ENST00000566349 KRTAP9-2Q9BYQ4 174 aa8.2□□□□□ -1.1
KLHDC4-215ENST00000566349 KRTAP10-10P60014 251 aa8.16□□□□□ -1.1
KLHDC4-215ENST00000566349 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
KLHDC4-215ENST00000566349 CHKB-CPT1BH3BT56 60 aa8.07□□□□□ -1.12
KLHDC4-215ENST00000566349 KRTAP9-3Q9BYQ3 159 aa8.05□□□□□ -1.12
KLHDC4-215ENST00000566349 H0YAA0 97 aa8.02□□□□□ -1.13
KLHDC4-215ENST00000566349 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
KLHDC4-215ENST00000566349 COA5Q86WW8 74 aa8.01□□□□□ -1.13
KLHDC4-215ENST00000566349 SPTSSBQ8NFR3 76 aa8.01□□□□□ -1.13
KLHDC4-215ENST00000566349 ADM2Q7Z4H4 148 aa7.97□□□□□ -1.13
KLHDC4-215ENST00000566349 ATP5EP56381 51 aaPredicted RBP7.93□□□□□ -1.14
KLHDC4-215ENST00000566349 TMEM258P61165 79 aa7.93□□□□□ -1.14
KLHDC4-215ENST00000566349 LCE2BO14633 110 aa7.9□□□□□ -1.14
KLHDC4-215ENST00000566349 KRTAP3-2Q9BYR7 98 aa7.87□□□□□ -1.15
KLHDC4-215ENST00000566349 KRTAP19-1Q8IUB9 90 aa7.86□□□□□ -1.15
KLHDC4-215ENST00000566349 P0C880 135 aa7.85□□□□□ -1.15
KLHDC4-215ENST00000566349 CRIPTQ9P021 101 aa7.85□□□□□ -1.15
KLHDC4-215ENST00000566349 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
KLHDC4-215ENST00000566349 USH2AO75445 5202 aa7.78□□□□□ -1.16
KLHDC4-215ENST00000566349 FSIP2Q5CZC0 6907 aa7.76□□□□□ -1.17
KLHDC4-215ENST00000566349 RPS28P62857 69 aaKnown RBP7.74□□□□□ -1.17
KLHDC4-215ENST00000566349 CRCT1Q9UGL9 99 aa7.71□□□□□ -1.17
KLHDC4-215ENST00000566349 R4GN34 69 aa7.71□□□□□ -1.17
KLHDC4-215ENST00000566349 KRTAP19-8Q3LI54 63 aa7.7□□□□□ -1.18
KLHDC4-215ENST00000566349 SERP1Q9Y6X1 66 aa7.69□□□□□ -1.18
KLHDC4-215ENST00000566349 M0QZ58 72 aa7.68□□□□□ -1.18
KLHDC4-215ENST00000566349 SEC61GP60059 68 aa7.67□□□□□ -1.18
KLHDC4-215ENST00000566349 Q5VV11 94 aa7.65□□□□□ -1.18
KLHDC4-215ENST00000566349 MT1BP07438 61 aa7.64□□□□□ -1.19
KLHDC4-215ENST00000566349 SSPOA2VEC9 5147 aa7.63□□□□□ -1.19
KLHDC4-215ENST00000566349 A0A1B0GU69 56 aa7.59□□□□□ -1.2
KLHDC4-215ENST00000566349 LINC01554Q52M75 96 aa7.55□□□□□ -1.2
KLHDC4-215ENST00000566349 KRTAP19-6Q3LI70 58 aa7.54□□□□□ -1.2
KLHDC4-215ENST00000566349 KRTAP13-4Q3LI77 160 aa7.53□□□□□ -1.2
KLHDC4-215ENST00000566349 LINC01558Q9Y6Z2 57 aa7.53□□□□□ -1.2
KLHDC4-215ENST00000566349 A0A1B0GU33 70 aa7.51□□□□□ -1.21
KLHDC4-215ENST00000566349 SMIM26A0A096LP01 95 aa7.49□□□□□ -1.21
KLHDC4-215ENST00000566349 PRR15LQ9BU68 103 aa7.47□□□□□ -1.21
KLHDC4-215ENST00000566349 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
KLHDC4-215ENST00000566349 SVIPQ8NHG7 77 aa7.44□□□□□ -1.22
KLHDC4-215ENST00000566349 SPATA8Q6RVD6 105 aa7.43□□□□□ -1.22
KLHDC4-215ENST00000566349 A6NN06 94 aa7.39□□□□□ -1.23
KLHDC4-215ENST00000566349 V9GYY9 64 aa7.37□□□□□ -1.23
KLHDC4-215ENST00000566349 KRTAP10-5P60370 271 aa7.36□□□□□ -1.23
KLHDC4-215ENST00000566349 Q1T7F1 81 aa7.36□□□□□ -1.23
KLHDC4-215ENST00000566349 FCGBPQ9Y6R7 5405 aaPredicted RBP7.35□□□□□ -1.23
KLHDC4-215ENST00000566349 A0A0D9SG42 100 aa7.34□□□□□ -1.23
KLHDC4-215ENST00000566349 MT1XP80297 61 aa7.29□□□□□ -1.24
KLHDC4-215ENST00000566349 PSPHP1O15172 72 aa7.28□□□□□ -1.24
KLHDC4-215ENST00000566349 PRO2289Q9P1D8 64 aa7.26□□□□□ -1.25
KLHDC4-215ENST00000566349 A8MU10 97 aa7.25□□□□□ -1.25
KLHDC4-215ENST00000566349 UQCR11O14957 56 aa7.25□□□□□ -1.25
KLHDC4-215ENST00000566349 KRTAP12-1P59990 96 aa7.21□□□□□ -1.25
KLHDC4-215ENST00000566349 SPINT4Q6UDR6 99 aa7.2□□□□□ -1.26
KLHDC4-215ENST00000566349 KRTAP9-7A8MTY7 169 aa7.18□□□□□ -1.26
KLHDC4-215ENST00000566349 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.17□□□□□ -1.26
KLHDC4-215ENST00000566349 KRTAP12-2P59991 146 aa7.17□□□□□ -1.26
KLHDC4-215ENST00000566349 CAMK2N1Q7Z7J9 78 aa7.17□□□□□ -1.26
KLHDC4-215ENST00000566349 MIR22HGQ0VDD5 57 aa7.14□□□□□ -1.27
KLHDC4-215ENST00000566349 MACF1Q9UPN3 7388 aaKnown RBP7.06□□□□□ -1.28
KLHDC4-215ENST00000566349 A6NED7 52 aa7.05□□□□□ -1.28
KLHDC4-215ENST00000566349 KRTAP10-7P60409 375 aaPredicted RBP6.96□□□□□ -1.29
KLHDC4-215ENST00000566349 PRO0628Q9UI54 55 aa6.93□□□□□ -1.3
KLHDC4-215ENST00000566349 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
KLHDC4-215ENST00000566349 SYNE2Q8WXH0 6885 aaKnown RBP6.91□□□□□ -1.3
KLHDC4-215ENST00000566349 K7ERS5 55 aa6.89□□□□□ -1.31
KLHDC4-215ENST00000566349 BRK1Q8WUW1 75 aa6.89□□□□□ -1.31
KLHDC4-215ENST00000566349 CDC42SE1Q9NRR8 79 aa6.86□□□□□ -1.31
KLHDC4-215ENST00000566349 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
KLHDC4-215ENST00000566349 KMT2DO14686 5537 aa6.84□□□□□ -1.31
KLHDC4-215ENST00000566349 KRTAP6-3Q3LI67 103 aa6.84□□□□□ -1.31
KLHDC4-215ENST00000566349 KRTAP4-8A0A0G2JLE6 195 aa6.83□□□□□ -1.32
KLHDC4-215ENST00000566349 KRTAP4-8Q9BYQ9 185 aa6.83□□□□□ -1.32
KLHDC4-215ENST00000566349 KRTAP8-1Q8IUC2 63 aa6.78□□□□□ -1.32
KLHDC4-215ENST00000566349 TNP1P09430 55 aa6.73□□□□□ -1.33
KLHDC4-215ENST00000566349 KRTAP5-9P26371 169 aa6.73□□□□□ -1.33
KLHDC4-215ENST00000566349 SPRR2FQ96RM1 72 aa6.65□□□□□ -1.35
KLHDC4-215ENST00000566349 KRTAP25-1Q3LHN0 102 aa6.57□□□□□ -1.36
KLHDC4-215ENST00000566349 MUC12Q9UKN1 5478 aa6.56□□□□□ -1.36
KLHDC4-215ENST00000566349 PMAIP1Q13794 54 aa6.55□□□□□ -1.36
KLHDC4-215ENST00000566349 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
KLHDC4-215ENST00000566349 ROMO1P60602 79 aa6.53□□□□□ -1.36
KLHDC4-215ENST00000566349 KRTAP19-7Q3SYF9 63 aa6.5□□□□□ -1.37
KLHDC4-215ENST00000566349 NEBP20929 6669 aa6.47□□□□□ -1.37
KLHDC4-215ENST00000566349 KRTAP19-5Q3LI72 72 aa6.46□□□□□ -1.37
KLHDC4-215ENST00000566349 MDN1Q9NU22 5596 aa6.46□□□□□ -1.38
KLHDC4-215ENST00000566349 SPRR2EP22531 72 aa6.44□□□□□ -1.38
KLHDC4-215ENST00000566349 SPRR2BP35325 72 aa6.44□□□□□ -1.38
KLHDC4-215ENST00000566349 SPRR2AP35326 72 aa6.44□□□□□ -1.38
KLHDC4-215ENST00000566349 LCE1AQ5T7P2 110 aa6.43□□□□□ -1.38
KLHDC4-215ENST00000566349 MT1EP04732 61 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms