RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 C4orf26Q17RF5 130 aa5.05□□□□□ -1.6
UBFD1-203ENST00000564106 COA5Q86WW8 74 aa5.05□□□□□ -1.6
UBFD1-203ENST00000564106 FSIP2Q5CZC0 6907 aa5.03□□□□□ -1.6
UBFD1-203ENST00000564106 CHKB-CPT1BH3BT56 60 aa5.03□□□□□ -1.6
UBFD1-203ENST00000564106 COX6B2Q6YFQ2 88 aa5.03□□□□□ -1.6
UBFD1-203ENST00000564106 KRTAP3-3Q9BYR6 98 aa5.02□□□□□ -1.61
UBFD1-203ENST00000564106 KRTAP3-2Q9BYR7 98 aa5.02□□□□□ -1.61
UBFD1-203ENST00000564106 FLGP20930 4061 aaPredicted RBP5.02□□□□□ -1.61
UBFD1-203ENST00000564106 V9GYY9 64 aa5□□□□□ -1.61
UBFD1-203ENST00000564106 SPTSSBQ8NFR3 76 aa4.99□□□□□ -1.61
UBFD1-203ENST00000564106 RBM12B-AS1Q9P1G2 102 aa4.99□□□□□ -1.61
UBFD1-203ENST00000564106 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
UBFD1-203ENST00000564106 KRTAP10-6P60371 365 aaPredicted RBP4.95□□□□□ -1.62
UBFD1-203ENST00000564106 Q1T7F1 81 aa4.94□□□□□ -1.62
UBFD1-203ENST00000564106 MPLKIPQ8TAP9 179 aa4.94□□□□□ -1.62
UBFD1-203ENST00000564106 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
UBFD1-203ENST00000564106 KRTAP3-1Q9BYR8 98 aa4.93□□□□□ -1.62
UBFD1-203ENST00000564106 H1FX-AS1Q4G0G2 97 aa4.9□□□□□ -1.63
UBFD1-203ENST00000564106 LINC01558Q9Y6Z2 57 aa4.88□□□□□ -1.63
UBFD1-203ENST00000564106 S4R3F8 94 aa4.88□□□□□ -1.63
UBFD1-203ENST00000564106 PRR15LQ9BU68 103 aa4.87□□□□□ -1.63
UBFD1-203ENST00000564106 SEC61GP60059 68 aa4.84□□□□□ -1.63
UBFD1-203ENST00000564106 A0A1B0GU69 56 aa4.82□□□□□ -1.64
UBFD1-203ENST00000564106 LCA10Q71F78 164 aa4.82□□□□□ -1.64
UBFD1-203ENST00000564106 M0R2T5 61 aa4.81□□□□□ -1.64
UBFD1-203ENST00000564106 PSPHP1O15172 72 aa4.8□□□□□ -1.64
UBFD1-203ENST00000564106 SSPOA2VEC9 5147 aa4.79□□□□□ -1.64
UBFD1-203ENST00000564106 USH2AO75445 5202 aa4.79□□□□□ -1.64
UBFD1-203ENST00000564106 CSAG1Q6PB30 78 aa4.78□□□□□ -1.64
UBFD1-203ENST00000564106 KRTAP9-8Q9BYQ0 159 aa4.77□□□□□ -1.65
UBFD1-203ENST00000564106 Q5VV11 94 aa4.76□□□□□ -1.65
UBFD1-203ENST00000564106 A6NED7 52 aa4.71□□□□□ -1.66
UBFD1-203ENST00000564106 H0YAA0 97 aa4.71□□□□□ -1.66
UBFD1-203ENST00000564106 UQCR11O14957 56 aa4.7□□□□□ -1.66
UBFD1-203ENST00000564106 MT2AP02795 61 aa4.7□□□□□ -1.66
UBFD1-203ENST00000564106 MT1FP04733 61 aa4.68□□□□□ -1.66
UBFD1-203ENST00000564106 A0A1B0GU33 70 aa4.66□□□□□ -1.66
UBFD1-203ENST00000564106 LCE2BO14633 110 aa4.66□□□□□ -1.66
UBFD1-203ENST00000564106 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.65□□□□□ -1.67
UBFD1-203ENST00000564106 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
UBFD1-203ENST00000564106 CDC42SE1Q9NRR8 79 aa4.64□□□□□ -1.67
UBFD1-203ENST00000564106 ADM2Q7Z4H4 148 aa4.63□□□□□ -1.67
UBFD1-203ENST00000564106 KRTAP9-3Q9BYQ3 159 aa4.63□□□□□ -1.67
UBFD1-203ENST00000564106 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
UBFD1-203ENST00000564106 MIR22HGQ0VDD5 57 aa4.61□□□□□ -1.67
UBFD1-203ENST00000564106 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.67
UBFD1-203ENST00000564106 SPATA8Q6RVD6 105 aa4.59□□□□□ -1.67
UBFD1-203ENST00000564106 KRTAP19-1Q8IUB9 90 aa4.58□□□□□ -1.68
UBFD1-203ENST00000564106 PRO0628Q9UI54 55 aa4.58□□□□□ -1.68
UBFD1-203ENST00000564106 P0C880 135 aa4.57□□□□□ -1.68
UBFD1-203ENST00000564106 M0QZ58 72 aa4.56□□□□□ -1.68
UBFD1-203ENST00000564106 KRTAP10-10P60014 251 aa4.54□□□□□ -1.68
UBFD1-203ENST00000564106 CRIPTQ9P021 101 aa4.52□□□□□ -1.69
UBFD1-203ENST00000564106 R4GN34 69 aa4.52□□□□□ -1.69
UBFD1-203ENST00000564106 K7ERS5 55 aa4.49□□□□□ -1.69
UBFD1-203ENST00000564106 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
UBFD1-203ENST00000564106 A8MU10 97 aa4.46□□□□□ -1.7
UBFD1-203ENST00000564106 KRTAP13-4Q3LI77 160 aa4.46□□□□□ -1.7
UBFD1-203ENST00000564106 SYNE2Q8WXH0 6885 aaKnown RBP4.45□□□□□ -1.7
UBFD1-203ENST00000564106 KRTAP19-6Q3LI70 58 aa4.44□□□□□ -1.7
UBFD1-203ENST00000564106 A0A0D9SG42 100 aa4.42□□□□□ -1.7
UBFD1-203ENST00000564106 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
UBFD1-203ENST00000564106 A6NN06 94 aa4.39□□□□□ -1.71
UBFD1-203ENST00000564106 LINC01554Q52M75 96 aa4.38□□□□□ -1.71
UBFD1-203ENST00000564106 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
UBFD1-203ENST00000564106 SPINT4Q6UDR6 99 aa4.34□□□□□ -1.71
UBFD1-203ENST00000564106 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.71
UBFD1-203ENST00000564106 KRTAP12-2P59991 146 aa4.3□□□□□ -1.72
UBFD1-203ENST00000564106 MT1BP07438 61 aa4.27□□□□□ -1.73
UBFD1-203ENST00000564106 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
UBFD1-203ENST00000564106 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
UBFD1-203ENST00000564106 PLAC4Q8WY50 150 aa4.25□□□□□ -1.73
UBFD1-203ENST00000564106 CAMK2N1Q7Z7J9 78 aa4.24□□□□□ -1.73
UBFD1-203ENST00000564106 ROMO1P60602 79 aa4.23□□□□□ -1.73
UBFD1-203ENST00000564106 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.74
UBFD1-203ENST00000564106 SVIPQ8NHG7 77 aa4.21□□□□□ -1.74
UBFD1-203ENST00000564106 NEBP20929 6669 aa4.19□□□□□ -1.74
UBFD1-203ENST00000564106 MUC12Q9UKN1 5478 aa4.16□□□□□ -1.74
UBFD1-203ENST00000564106 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
UBFD1-203ENST00000564106 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
UBFD1-203ENST00000564106 C10orf95Q9H7T3 257 aa4.08□□□□□ -1.76
UBFD1-203ENST00000564106 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
UBFD1-203ENST00000564106 KMT2DO14686 5537 aa4.07□□□□□ -1.76
UBFD1-203ENST00000564106 KRTAP5-9P26371 169 aa4.05□□□□□ -1.76
UBFD1-203ENST00000564106 TNP1P09430 55 aa4.04□□□□□ -1.76
UBFD1-203ENST00000564106 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
UBFD1-203ENST00000564106 MDN1Q9NU22 5596 aa4.01□□□□□ -1.77
UBFD1-203ENST00000564106 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
UBFD1-203ENST00000564106 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
UBFD1-203ENST00000564106 MT1XP80297 61 aa3.98□□□□□ -1.77
UBFD1-203ENST00000564106 KRTAP23-1A1A580 65 aa3.96□□□□□ -1.78
UBFD1-203ENST00000564106 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
UBFD1-203ENST00000564106 KRTAP4-8A0A0G2JLE6 195 aa3.86□□□□□ -1.79
UBFD1-203ENST00000564106 SPRR2EP22531 72 aa3.86□□□□□ -1.79
UBFD1-203ENST00000564106 SPRR2BP35325 72 aa3.86□□□□□ -1.79
UBFD1-203ENST00000564106 SPRR2AP35326 72 aa3.86□□□□□ -1.79
UBFD1-203ENST00000564106 KRTAP4-8Q9BYQ9 185 aa3.86□□□□□ -1.79
UBFD1-203ENST00000564106 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
UBFD1-203ENST00000564106 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
UBFD1-203ENST00000564106 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms