RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 LELP1Q5T871 98 aa2.37□□□□□ -2.03
SMG1-207ENST00000563235 HERC1Q15751 4861 aa2.36□□□□□ -2.03
SMG1-207ENST00000563235 DNAH10Q8IVF4 4471 aa2.36□□□□□ -2.03
SMG1-207ENST00000563235 K7EIL1 84 aa2.36□□□□□ -2.03
SMG1-207ENST00000563235 KRTAP2-2Q9BYT5 123 aa2.36□□□□□ -2.03
SMG1-207ENST00000563235 DEFB136Q30KP8 78 aa2.35□□□□□ -2.03
SMG1-207ENST00000563235 PLECQ15149 4684 aaKnown RBP2.35□□□□□ -2.03
SMG1-207ENST00000563235 ANAPC11Q9NYG5 84 aa2.35□□□□□ -2.03
SMG1-207ENST00000563235 DYNC1H1Q14204 4646 aaKnown RBP2.34□□□□□ -2.03
SMG1-207ENST00000563235 KRTAP10-11P60412 298 aa2.34□□□□□ -2.03
SMG1-207ENST00000563235 KRTAP1-4P0C5Y4 121 aa2.33□□□□□ -2.04
SMG1-207ENST00000563235 KRTAP12-2P59991 146 aa2.33□□□□□ -2.04
SMG1-207ENST00000563235 MRPL34Q9BQ48 92 aaKnown RBP2.33□□□□□ -2.04
SMG1-207ENST00000563235 KMT2AQ03164 3969 aa2.32□□□□□ -2.04
SMG1-207ENST00000563235 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
SMG1-207ENST00000563235 DNAH11Q96DT5 4516 aa2.31□□□□□ -2.04
SMG1-207ENST00000563235 PP632Q6XCG6 107 aa2.31□□□□□ -2.04
SMG1-207ENST00000563235 HUWE1Q7Z6Z7 4374 aaKnown RBP2.31□□□□□ -2.04
SMG1-207ENST00000563235 KRTAP10-3P60369 221 aa2.31□□□□□ -2.04
SMG1-207ENST00000563235 C10orf95Q9H7T3 257 aa2.31□□□□□ -2.04
SMG1-207ENST00000563235 STARD9Q9P2P6 4700 aa2.31□□□□□ -2.04
SMG1-207ENST00000563235 FRAS1Q86XX4 4008 aa2.3□□□□□ -2.04
SMG1-207ENST00000563235 STAB2Q8WWQ8 2551 aa2.29□□□□□ -2.04
SMG1-207ENST00000563235 H0YAA0 97 aa2.29□□□□□ -2.04
SMG1-207ENST00000563235 DEFB130BP0DP73 79 aa2.29□□□□□ -2.04
SMG1-207ENST00000563235 DEFB130AP0DP74 79 aa2.29□□□□□ -2.04
SMG1-207ENST00000563235 DNAH6Q9C0G6 4158 aa2.29□□□□□ -2.04
SMG1-207ENST00000563235 H3BNG1 76 aa2.29□□□□□ -2.04
SMG1-207ENST00000563235 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
SMG1-207ENST00000563235 A0A096LPF7 62 aa2.28□□□□□ -2.04
SMG1-207ENST00000563235 UBE2DNLQ8IWF7 75 aa2.28□□□□□ -2.04
SMG1-207ENST00000563235 RPL37P61927 97 aaKnown RBP2.27□□□□□ -2.05
SMG1-207ENST00000563235 Q6ZSA8 131 aa2.27□□□□□ -2.05
SMG1-207ENST00000563235 HSPG2P98160 4391 aa2.26□□□□□ -2.05
SMG1-207ENST00000563235 A0A1B0GVY2 172 aa2.26□□□□□ -2.05
SMG1-207ENST00000563235 FAT2Q9NYQ8 4349 aa2.26□□□□□ -2.05
SMG1-207ENST00000563235 KRTAP10-6P60371 365 aaPredicted RBP2.26□□□□□ -2.05
SMG1-207ENST00000563235 DNAH17Q9UFH2 4485 aa2.26□□□□□ -2.05
SMG1-207ENST00000563235 LINC01556Q5JQF7 62 aa2.25□□□□□ -2.05
SMG1-207ENST00000563235 HMCN2Q8NDA2 5059 aa2.25□□□□□ -2.05
SMG1-207ENST00000563235 KRTAP13-1Q8IUC0 172 aa2.24□□□□□ -2.05
SMG1-207ENST00000563235 CSMD3Q7Z407 3707 aa2.24□□□□□ -2.05
SMG1-207ENST00000563235 DNAH2Q9P225 4427 aa2.24□□□□□ -2.05
SMG1-207ENST00000563235 DMBT1Q9UGM3 2413 aaPredicted RBP2.24□□□□□ -2.05
SMG1-207ENST00000563235 PKHD1P08F94 4074 aa2.24□□□□□ -2.05
SMG1-207ENST00000563235 KRTAP13-4Q3LI77 160 aa2.23□□□□□ -2.05
SMG1-207ENST00000563235 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
SMG1-207ENST00000563235 PRLHP81277 87 aa2.22□□□□□ -2.05
SMG1-207ENST00000563235 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
SMG1-207ENST00000563235 FAT4Q6V0I7 4981 aa2.22□□□□□ -2.05
SMG1-207ENST00000563235 DEFB135Q30KP9 77 aa2.22□□□□□ -2.05
SMG1-207ENST00000563235 MYCBP2O75592 4640 aa2.21□□□□□ -2.06
SMG1-207ENST00000563235 SPART-AS1P0CW21 52 aa2.21□□□□□ -2.06
SMG1-207ENST00000563235 H1FX-AS1Q4G0G2 97 aa2.21□□□□□ -2.06
SMG1-207ENST00000563235 LRP1BQ9NZR2 4599 aa2.21□□□□□ -2.06
SMG1-207ENST00000563235 DEFB4AO15263 64 aa2.2□□□□□ -2.06
SMG1-207ENST00000563235 KRTAP10-1P60331 282 aa2.2□□□□□ -2.06
SMG1-207ENST00000563235 LCE1AQ5T7P2 110 aa2.2□□□□□ -2.06
SMG1-207ENST00000563235 MUC2Q02817 5179 aa2.2□□□□□ -2.06
SMG1-207ENST00000563235 VPS13DQ5THJ4 4388 aa2.2□□□□□ -2.06
SMG1-207ENST00000563235 COX6B2Q6YFQ2 88 aa2.19□□□□□ -2.06
SMG1-207ENST00000563235 CRCT1Q9UGL9 99 aa2.19□□□□□ -2.06
SMG1-207ENST00000563235 VPS13BQ7Z7G8 4022 aa2.19□□□□□ -2.06
SMG1-207ENST00000563235 KRTAP1-5Q9BYS1 174 aa2.18□□□□□ -2.06
SMG1-207ENST00000563235 RNF213Q63HN8 5207 aa2.17□□□□□ -2.06
SMG1-207ENST00000563235 PKD1P98161 4303 aa2.17□□□□□ -2.06
SMG1-207ENST00000563235 A0A096LNI7 61 aa2.17□□□□□ -2.06
SMG1-207ENST00000563235 HTN3P15516 51 aa2.17□□□□□ -2.06
SMG1-207ENST00000563235 APOBP04114 4563 aaKnown RBP2.15□□□□□ -2.07
SMG1-207ENST00000563235 KRTAP10-7P60409 375 aaPredicted RBP2.14□□□□□ -2.07
SMG1-207ENST00000563235 PKHD1L1Q86WI1 4243 aa2.14□□□□□ -2.07
SMG1-207ENST00000563235 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
SMG1-207ENST00000563235 LCE3CQ5T5A8 94 aa2.11□□□□□ -2.07
SMG1-207ENST00000563235 SRRM2Q9UQ35 2752 aaKnown RBP2.1□□□□□ -2.07
SMG1-207ENST00000563235 APLNQ9ULZ1 77 aa2.1□□□□□ -2.07
SMG1-207ENST00000563235 DNAH5Q8TE73 4624 aa2.08□□□□□ -2.08
SMG1-207ENST00000563235 KRTAP12-1P59990 96 aa2.08□□□□□ -2.08
SMG1-207ENST00000563235 LCE1EQ5T753 118 aa2.08□□□□□ -2.08
SMG1-207ENST00000563235 Q5VSD8 79 aa2.07□□□□□ -2.08
SMG1-207ENST00000563235 FAT1Q14517 4588 aa2.07□□□□□ -2.08
SMG1-207ENST00000563235 SPINK1P00995 79 aa2.07□□□□□ -2.08
SMG1-207ENST00000563235 SPRR5A0A1B0GTR4 108 aa2.06□□□□□ -2.08
SMG1-207ENST00000563235 MT3P25713 68 aa2.06□□□□□ -2.08
SMG1-207ENST00000563235 SPINK6Q6UWN8 80 aa2.05□□□□□ -2.08
SMG1-207ENST00000563235 FAT3Q8TDW7 4589 aa2.05□□□□□ -2.08
SMG1-207ENST00000563235 S4R3F8 94 aa2.04□□□□□ -2.08
SMG1-207ENST00000563235 TNXBP22105 4242 aa2.01□□□□□ -2.09
SMG1-207ENST00000563235 KRTAP10-10P60014 251 aa2□□□□□ -2.09
SMG1-207ENST00000563235 DNAH8Q96JB1 4490 aa1.99□□□□□ -2.09
SMG1-207ENST00000563235 LRP2P98164 4655 aa1.99□□□□□ -2.09
SMG1-207ENST00000563235 SSPOA2VEC9 5147 aa1.99□□□□□ -2.09
SMG1-207ENST00000563235 KRTAP6-3Q3LI67 103 aa1.98□□□□□ -2.09
SMG1-207ENST00000563235 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
SMG1-207ENST00000563235 RPS29P62273 56 aaKnown RBP1.97□□□□□ -2.09
SMG1-207ENST00000563235 LCE3EQ5T5B0 92 aa1.96□□□□□ -2.1
SMG1-207ENST00000563235 KRTAP10-12P60413 245 aa1.95□□□□□ -2.1
SMG1-207ENST00000563235 A0A0D9SG42 100 aa1.94□□□□□ -2.1
SMG1-207ENST00000563235 M0QZ58 72 aa1.92□□□□□ -2.1
SMG1-207ENST00000563235 MT1HL1P0DM35 61 aa1.91□□□□□ -2.1
SMG1-207ENST00000563235 LRP1Q07954 4544 aaKnown RBP1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms