RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 K7ERS5 55 aa11.2□□□□□ -0.62
LINC00565-201ENST00000562710 KRTAP25-1Q3LHN0 102 aa11.18□□□□□ -0.62
LINC00565-201ENST00000562710 HSPG2P98160 4391 aa11.17□□□□□ -0.62
LINC00565-201ENST00000562710 KMT2CQ8NEZ4 4911 aaKnown RBP11.16□□□□□ -0.62
LINC00565-201ENST00000562710 DMBT1Q9UGM3 2413 aaPredicted RBP11.16□□□□□ -0.62
LINC00565-201ENST00000562710 KRTAP10-6P60371 365 aaPredicted RBP11.16□□□□□ -0.62
LINC00565-201ENST00000562710 XP32Q5T750 250 aa11.14□□□□□ -0.63
LINC00565-201ENST00000562710 Q5VSD8 79 aa11.13□□□□□ -0.63
LINC00565-201ENST00000562710 S4R3F8 94 aa11.08□□□□□ -0.64
LINC00565-201ENST00000562710 KRTAP3-2Q9BYR7 98 aa11.07□□□□□ -0.64
LINC00565-201ENST00000562710 KRTAP13-4Q3LI77 160 aa11.05□□□□□ -0.64
LINC00565-201ENST00000562710 MYCBP2O75592 4640 aa11.01□□□□□ -0.65
LINC00565-201ENST00000562710 ROMO1P60602 79 aa10.97□□□□□ -0.65
LINC00565-201ENST00000562710 CRIPTQ9P021 101 aa10.97□□□□□ -0.65
LINC00565-201ENST00000562710 A0A0D9SG42 100 aa10.96□□□□□ -0.65
LINC00565-201ENST00000562710 P0C880 135 aa10.92□□□□□ -0.66
LINC00565-201ENST00000562710 RYR1P21817 5038 aa10.91□□□□□ -0.66
LINC00565-201ENST00000562710 KRTAP17-1Q9BYP8 105 aa10.9□□□□□ -0.66
LINC00565-201ENST00000562710 MT1HL1P0DM35 61 aa10.87□□□□□ -0.67
LINC00565-201ENST00000562710 RYR3Q15413 4870 aa10.75□□□□□ -0.69
LINC00565-201ENST00000562710 LPAP08519 4548 aa10.71□□□□□ -0.69
LINC00565-201ENST00000562710 KRTAP12-2P59991 146 aa10.7□□□□□ -0.7
LINC00565-201ENST00000562710 KIAA1109Q2LD37 5005 aa10.7□□□□□ -0.7
LINC00565-201ENST00000562710 TPRXLQ17RH7 258 aa10.68□□□□□ -0.7
LINC00565-201ENST00000562710 LRP2P98164 4655 aa10.66□□□□□ -0.7
LINC00565-201ENST00000562710 KRTAP12-1P59990 96 aa10.63□□□□□ -0.71
LINC00565-201ENST00000562710 SPINT4Q6UDR6 99 aa10.59□□□□□ -0.71
LINC00565-201ENST00000562710 C10orf95Q9H7T3 257 aa10.58□□□□□ -0.72
LINC00565-201ENST00000562710 M0QZ58 72 aa10.57□□□□□ -0.72
LINC00565-201ENST00000562710 ABCA13Q86UQ4 5058 aa10.39□□□□□ -0.75
LINC00565-201ENST00000562710 EPPK1P58107 5090 aaKnown RBP10.36□□□□□ -0.75
LINC00565-201ENST00000562710 R4GN34 69 aa10.29□□□□□ -0.76
LINC00565-201ENST00000562710 KRTAP4-5Q9BYR2 181 aa10.28□□□□□ -0.76
LINC00565-201ENST00000562710 SEC61BP60468 96 aaKnown RBP10.26□□□□□ -0.77
LINC00565-201ENST00000562710 KRTAP15-1Q3LI76 137 aa10.22□□□□□ -0.77
LINC00565-201ENST00000562710 MUC17Q685J3 4493 aa10.21□□□□□ -0.77
LINC00565-201ENST00000562710 LORP23490 312 aaPredicted RBP10.15□□□□□ -0.79
LINC00565-201ENST00000562710 KRTAP4-1Q9BYQ7 146 aa10.15□□□□□ -0.79
LINC00565-201ENST00000562710 KRTAP19-2Q3LHN2 52 aa10□□□□□ -0.81
LINC00565-201ENST00000562710 NDUFAF8A1L188 74 aa9.98□□□□□ -0.81
LINC00565-201ENST00000562710 J3QL48 77 aa9.98□□□□□ -0.81
LINC00565-201ENST00000562710 A0A0A0MQY5 61 aa9.97□□□□□ -0.81
LINC00565-201ENST00000562710 HERC2O95714 4834 aa9.83□□□□□ -0.84
LINC00565-201ENST00000562710 CAMK2N1Q7Z7J9 78 aa9.77□□□□□ -0.85
LINC00565-201ENST00000562710 PLAC4Q8WY50 150 aa9.74□□□□□ -0.85
LINC00565-201ENST00000562710 FLGP20930 4061 aaPredicted RBP9.73□□□□□ -0.85
LINC00565-201ENST00000562710 MUC2Q02817 5179 aa9.7□□□□□ -0.86
LINC00565-201ENST00000562710 PP632Q6XCG6 107 aa9.68□□□□□ -0.86
LINC00565-201ENST00000562710 BIRC6Q9NR09 4857 aa9.62□□□□□ -0.87
LINC00565-201ENST00000562710 HERC1Q15751 4861 aa9.47□□□□□ -0.89
LINC00565-201ENST00000562710 TNP1P09430 55 aa9.43□□□□□ -0.9
LINC00565-201ENST00000562710 PCLOQ9Y6V0 5065 aa9.42□□□□□ -0.9
LINC00565-201ENST00000562710 KRTAP23-1A1A580 65 aa9.35□□□□□ -0.91
LINC00565-201ENST00000562710 LCE2CQ5TA81 110 aa9.34□□□□□ -0.91
LINC00565-201ENST00000562710 HMCN2Q8NDA2 5059 aa9.32□□□□□ -0.92
LINC00565-201ENST00000562710 LUZP6Q538Z0 58 aa9.3□□□□□ -0.92
LINC00565-201ENST00000562710 SPRR2GQ9BYE4 73 aa9.26□□□□□ -0.93
LINC00565-201ENST00000562710 FAT4Q6V0I7 4981 aa9.21□□□□□ -0.93
LINC00565-201ENST00000562710 KRTAP19-1Q8IUB9 90 aa9.21□□□□□ -0.94
LINC00565-201ENST00000562710 M0R2T5 61 aa9.12□□□□□ -0.95
LINC00565-201ENST00000562710 SPRR5A0A1B0GTR4 108 aa9.08□□□□□ -0.96
LINC00565-201ENST00000562710 MT1HP80294 61 aa9.07□□□□□ -0.96
LINC00565-201ENST00000562710 MT1FP04733 61 aa8.97□□□□□ -0.97
LINC00565-201ENST00000562710 MT2AP02795 61 aa8.97□□□□□ -0.97
LINC00565-201ENST00000562710 KRTAP10-10P60014 251 aa8.96□□□□□ -0.98
LINC00565-201ENST00000562710 RNF213Q63HN8 5207 aa8.94□□□□□ -0.98
LINC00565-201ENST00000562710 LCE3AQ5TA76 89 aa8.92□□□□□ -0.98
LINC00565-201ENST00000562710 KRTAP9-8Q9BYQ0 159 aa8.89□□□□□ -0.99
LINC00565-201ENST00000562710 UBR4Q5T4S7 5183 aa8.87□□□□□ -0.99
LINC00565-201ENST00000562710 KRTAP19-8Q3LI54 63 aa8.83□□□□□ -1
LINC00565-201ENST00000562710 MT1BP07438 61 aa8.71□□□□□ -1.02
LINC00565-201ENST00000562710 KRTAP8-1Q8IUC2 63 aa8.71□□□□□ -1.02
LINC00565-201ENST00000562710 KRTAP10-5P60370 271 aa8.69□□□□□ -1.02
LINC00565-201ENST00000562710 MT1XP80297 61 aa8.68□□□□□ -1.02
LINC00565-201ENST00000562710 KRTAP10-12P60413 245 aa8.54□□□□□ -1.04
LINC00565-201ENST00000562710 KRTAP9-3Q9BYQ3 159 aa8.51□□□□□ -1.05
LINC00565-201ENST00000562710 KRTAP12-3P60328 96 aa8.49□□□□□ -1.05
LINC00565-201ENST00000562710 KRTAP10-7P60409 375 aaPredicted RBP8.44□□□□□ -1.06
LINC00565-201ENST00000562710 PRO2289Q9P1D8 64 aa8.32□□□□□ -1.08
LINC00565-201ENST00000562710 LCE2BO14633 110 aa8.15□□□□□ -1.1
LINC00565-201ENST00000562710 KRTAP19-5Q3LI72 72 aa8.11□□□□□ -1.11
LINC00565-201ENST00000562710 INE1O15225 51 aa8.04□□□□□ -1.12
LINC00565-201ENST00000562710 LCE3CQ5T5A8 94 aa8.01□□□□□ -1.13
LINC00565-201ENST00000562710 USH2AO75445 5202 aa7.95□□□□□ -1.14
LINC00565-201ENST00000562710 LCE2AQ5TA79 106 aaPredicted RBP7.91□□□□□ -1.14
LINC00565-201ENST00000562710 KMT2DO14686 5537 aa7.91□□□□□ -1.14
LINC00565-201ENST00000562710 KRTAP4-8A0A0G2JLE6 195 aa7.89□□□□□ -1.15
LINC00565-201ENST00000562710 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
LINC00565-201ENST00000562710 KRTAP19-7Q3SYF9 63 aa7.73□□□□□ -1.17
LINC00565-201ENST00000562710 KRTAP9-6A8MVA2 160 aa7.73□□□□□ -1.17
LINC00565-201ENST00000562710 KRTAP4-7Q9BYR0 210 aa7.59□□□□□ -1.19
LINC00565-201ENST00000562710 KRTAP19-4Q3LI73 84 aa7.56□□□□□ -1.2
LINC00565-201ENST00000562710 MT1LQ93083 61 aa7.51□□□□□ -1.21
LINC00565-201ENST00000562710 KRTAP2-3P0C7H8 128 aa7.5□□□□□ -1.21
LINC00565-201ENST00000562710 KRTAP2-4Q9BYR9 128 aa7.5□□□□□ -1.21
LINC00565-201ENST00000562710 KRTAP2-1Q9BYU5 128 aa7.5□□□□□ -1.21
LINC00565-201ENST00000562710 MT1EP04732 61 aa7.49□□□□□ -1.21
LINC00565-201ENST00000562710 SSPOA2VEC9 5147 aa7.44□□□□□ -1.22
LINC00565-201ENST00000562710 KRTAP19-6Q3LI70 58 aa7.27□□□□□ -1.25
LINC00565-201ENST00000562710 KRTAP4-3Q9BYR4 195 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms