RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 KRTAP3-3Q9BYR6 98 aa7.49□□□□□ -1.21
SPG7-204ENST00000561911 NDUFC1O43677 76 aa7.48□□□□□ -1.21
SPG7-204ENST00000561911 CCDC179H3BU77 68 aa7.47□□□□□ -1.21
SPG7-204ENST00000561911 CYSTM1Q9H1C7 97 aa7.47□□□□□ -1.21
SPG7-204ENST00000561911 MT2AP02795 61 aa7.46□□□□□ -1.22
SPG7-204ENST00000561911 ACYP2P14621 99 aa7.45□□□□□ -1.22
SPG7-204ENST00000561911 H7BZZ5 65 aa7.44□□□□□ -1.22
SPG7-204ENST00000561911 MT1FP04733 61 aa7.4□□□□□ -1.22
SPG7-204ENST00000561911 KRTAP10-10P60014 251 aa7.37□□□□□ -1.23
SPG7-204ENST00000561911 CHKB-CPT1BH3BT56 60 aa7.33□□□□□ -1.24
SPG7-204ENST00000561911 LCE2DQ5TA82 110 aaPredicted RBP7.32□□□□□ -1.24
SPG7-204ENST00000561911 COA5Q86WW8 74 aa7.28□□□□□ -1.24
SPG7-204ENST00000561911 SPTSSBQ8NFR3 76 aa7.28□□□□□ -1.24
SPG7-204ENST00000561911 H0YAA0 97 aa7.27□□□□□ -1.25
SPG7-204ENST00000561911 KRTAP9-2Q9BYQ4 174 aa7.27□□□□□ -1.25
SPG7-204ENST00000561911 KRTAP9-3Q9BYQ3 159 aa7.26□□□□□ -1.25
SPG7-204ENST00000561911 ATP5EP56381 51 aaPredicted RBP7.23□□□□□ -1.25
SPG7-204ENST00000561911 TMEM258P61165 79 aa7.21□□□□□ -1.26
SPG7-204ENST00000561911 ADM2Q7Z4H4 148 aa7.21□□□□□ -1.26
SPG7-204ENST00000561911 PCP4P48539 62 aa7.13□□□□□ -1.27
SPG7-204ENST00000561911 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
SPG7-204ENST00000561911 LCE2BO14633 110 aa7.12□□□□□ -1.27
SPG7-204ENST00000561911 CRIPTQ9P021 101 aa7.12□□□□□ -1.27
SPG7-204ENST00000561911 P0C880 135 aa7.11□□□□□ -1.27
SPG7-204ENST00000561911 KRTAP19-1Q8IUB9 90 aa7.1□□□□□ -1.27
SPG7-204ENST00000561911 SPRR2GQ9BYE4 73 aa7.08□□□□□ -1.28
SPG7-204ENST00000561911 USH2AO75445 5202 aa7.07□□□□□ -1.28
SPG7-204ENST00000561911 R4GN34 69 aa6.99□□□□□ -1.29
SPG7-204ENST00000561911 SERP1Q9Y6X1 66 aa6.98□□□□□ -1.29
SPG7-204ENST00000561911 FSIP2Q5CZC0 6907 aa6.98□□□□□ -1.29
SPG7-204ENST00000561911 SEC61GP60059 68 aa6.97□□□□□ -1.29
SPG7-204ENST00000561911 M0QZ58 72 aa6.96□□□□□ -1.3
SPG7-204ENST00000561911 KRTAP19-8Q3LI54 63 aa6.96□□□□□ -1.3
SPG7-204ENST00000561911 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
SPG7-204ENST00000561911 Q5VV11 94 aa6.92□□□□□ -1.3
SPG7-204ENST00000561911 SSPOA2VEC9 5147 aa6.91□□□□□ -1.3
SPG7-204ENST00000561911 MT1BP07438 61 aa6.9□□□□□ -1.3
SPG7-204ENST00000561911 KRTAP9-6A0A140TA67 174 aa6.88□□□□□ -1.31
SPG7-204ENST00000561911 A0A1B0GU69 56 aa6.88□□□□□ -1.31
SPG7-204ENST00000561911 LINC01558Q9Y6Z2 57 aa6.85□□□□□ -1.31
SPG7-204ENST00000561911 LINC01554Q52M75 96 aa6.84□□□□□ -1.31
SPG7-204ENST00000561911 KRTAP13-4Q3LI77 160 aa6.82□□□□□ -1.32
SPG7-204ENST00000561911 A0A1B0GU33 70 aa6.81□□□□□ -1.32
SPG7-204ENST00000561911 PRR15LQ9BU68 103 aa6.81□□□□□ -1.32
SPG7-204ENST00000561911 KRTAP19-6Q3LI70 58 aa6.8□□□□□ -1.32
SPG7-204ENST00000561911 RPS28P62857 69 aaKnown RBP6.75□□□□□ -1.33
SPG7-204ENST00000561911 PLAC4Q8WY50 150 aa6.75□□□□□ -1.33
SPG7-204ENST00000561911 SMIM26A0A096LP01 95 aa6.73□□□□□ -1.33
SPG7-204ENST00000561911 SPATA8Q6RVD6 105 aa6.73□□□□□ -1.33
SPG7-204ENST00000561911 V9GYY9 64 aa6.72□□□□□ -1.33
SPG7-204ENST00000561911 A6NN06 94 aa6.71□□□□□ -1.34
SPG7-204ENST00000561911 Q1T7F1 81 aa6.7□□□□□ -1.34
SPG7-204ENST00000561911 FCGBPQ9Y6R7 5405 aaPredicted RBP6.69□□□□□ -1.34
SPG7-204ENST00000561911 A0A0D9SG42 100 aa6.66□□□□□ -1.34
SPG7-204ENST00000561911 KRTAP10-5P60370 271 aa6.65□□□□□ -1.34
SPG7-204ENST00000561911 PSPHP1O15172 72 aa6.62□□□□□ -1.35
SPG7-204ENST00000561911 UQCR11O14957 56 aa6.59□□□□□ -1.35
SPG7-204ENST00000561911 MT1XP80297 61 aa6.58□□□□□ -1.36
SPG7-204ENST00000561911 A8MU10 97 aa6.57□□□□□ -1.36
SPG7-204ENST00000561911 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
SPG7-204ENST00000561911 KRTAP12-1P59990 96 aa6.53□□□□□ -1.36
SPG7-204ENST00000561911 SPINT4Q6UDR6 99 aa6.53□□□□□ -1.36
SPG7-204ENST00000561911 CAMK2N1Q7Z7J9 78 aa6.5□□□□□ -1.37
SPG7-204ENST00000561911 SVIPQ8NHG7 77 aa6.5□□□□□ -1.37
SPG7-204ENST00000561911 KRTAP12-2P59991 146 aa6.49□□□□□ -1.37
SPG7-204ENST00000561911 MIR22HGQ0VDD5 57 aa6.49□□□□□ -1.37
SPG7-204ENST00000561911 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.45□□□□□ -1.38
SPG7-204ENST00000561911 A6NED7 52 aa6.42□□□□□ -1.38
SPG7-204ENST00000561911 MACF1Q9UPN3 7388 aaKnown RBP6.39□□□□□ -1.39
SPG7-204ENST00000561911 KRTAP10-7P60409 375 aaPredicted RBP6.29□□□□□ -1.4
SPG7-204ENST00000561911 K7ERS5 55 aa6.28□□□□□ -1.4
SPG7-204ENST00000561911 SYNE2Q8WXH0 6885 aaKnown RBP6.26□□□□□ -1.41
SPG7-204ENST00000561911 KRTAP10-12P60413 245 aa6.25□□□□□ -1.41
SPG7-204ENST00000561911 KRTAP9-7A8MTY7 169 aa6.24□□□□□ -1.41
SPG7-204ENST00000561911 CDC42SE1Q9NRR8 79 aa6.23□□□□□ -1.41
SPG7-204ENST00000561911 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.42
SPG7-204ENST00000561911 KRTAP6-3Q3LI67 103 aa6.18□□□□□ -1.42
SPG7-204ENST00000561911 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.42
SPG7-204ENST00000561911 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.42
SPG7-204ENST00000561911 KMT2DO14686 5537 aa6.14□□□□□ -1.43
SPG7-204ENST00000561911 KRTAP8-1Q8IUC2 63 aa6.12□□□□□ -1.43
SPG7-204ENST00000561911 TNP1P09430 55 aa6.1□□□□□ -1.43
SPG7-204ENST00000561911 KRTAP5-9P26371 169 aa6.07□□□□□ -1.44
SPG7-204ENST00000561911 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
SPG7-204ENST00000561911 SPRR2FQ96RM1 72 aa6□□□□□ -1.45
SPG7-204ENST00000561911 KRTAP25-1Q3LHN0 102 aa5.98□□□□□ -1.45
SPG7-204ENST00000561911 ROMO1P60602 79 aa5.95□□□□□ -1.46
SPG7-204ENST00000561911 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
SPG7-204ENST00000561911 NEBP20929 6669 aa5.91□□□□□ -1.46
SPG7-204ENST00000561911 MUC12Q9UKN1 5478 aa5.91□□□□□ -1.46
SPG7-204ENST00000561911 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
SPG7-204ENST00000561911 MDN1Q9NU22 5596 aa5.86□□□□□ -1.47
SPG7-204ENST00000561911 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
SPG7-204ENST00000561911 MT1EP04732 61 aa5.81□□□□□ -1.48
SPG7-204ENST00000561911 SPRR2EP22531 72 aa5.81□□□□□ -1.48
SPG7-204ENST00000561911 SPRR2BP35325 72 aa5.81□□□□□ -1.48
SPG7-204ENST00000561911 SPRR2AP35326 72 aa5.81□□□□□ -1.48
SPG7-204ENST00000561911 LCE1AQ5T7P2 110 aa5.8□□□□□ -1.48
SPG7-204ENST00000561911 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
SPG7-204ENST00000561911 KRTAP12-3P60328 96 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 913.1 ms