RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 MPLKIPQ8TAP9 179 aa8.39□□□□□ -1.07
TPM1-219ENST00000559397 FLGP20930 4061 aaPredicted RBP8.37□□□□□ -1.07
TPM1-219ENST00000559397 LCE2CQ5TA81 110 aa8.34□□□□□ -1.07
TPM1-219ENST00000559397 CHKB-CPT1BH3BT56 60 aa8.33□□□□□ -1.08
TPM1-219ENST00000559397 RBM12B-AS1Q9P1G2 102 aa8.3□□□□□ -1.08
TPM1-219ENST00000559397 Q1T7F1 81 aa8.29□□□□□ -1.08
TPM1-219ENST00000559397 V9GYY9 64 aa8.24□□□□□ -1.09
TPM1-219ENST00000559397 H1FX-AS1Q4G0G2 97 aa8.21□□□□□ -1.1
TPM1-219ENST00000559397 LINC01558Q9Y6Z2 57 aa8.2□□□□□ -1.1
TPM1-219ENST00000559397 MT1HP80294 61 aa8.19□□□□□ -1.1
TPM1-219ENST00000559397 LCE2AQ5TA79 106 aaPredicted RBP8.18□□□□□ -1.1
TPM1-219ENST00000559397 SPTSSBQ8NFR3 76 aa8.18□□□□□ -1.1
TPM1-219ENST00000559397 S4R3F8 94 aa8.13□□□□□ -1.11
TPM1-219ENST00000559397 LCA10Q71F78 164 aa8.12□□□□□ -1.11
TPM1-219ENST00000559397 PSPHP1O15172 72 aa8.1□□□□□ -1.11
TPM1-219ENST00000559397 PRR15LQ9BU68 103 aa8.09□□□□□ -1.11
TPM1-219ENST00000559397 Q5VV11 94 aa8.07□□□□□ -1.12
TPM1-219ENST00000559397 M0R2T5 61 aa8.03□□□□□ -1.12
TPM1-219ENST00000559397 A0A1B0GU69 56 aa8.02□□□□□ -1.13
TPM1-219ENST00000559397 KRTAP10-6P60371 365 aaPredicted RBP7.95□□□□□ -1.14
TPM1-219ENST00000559397 CSAG1Q6PB30 78 aa7.95□□□□□ -1.14
TPM1-219ENST00000559397 SEC61GP60059 68 aa7.95□□□□□ -1.14
TPM1-219ENST00000559397 LORP23490 312 aaPredicted RBP7.93□□□□□ -1.14
TPM1-219ENST00000559397 A6NED7 52 aa7.85□□□□□ -1.15
TPM1-219ENST00000559397 KRTAP9-8Q9BYQ0 159 aa7.84□□□□□ -1.15
TPM1-219ENST00000559397 H0YAA0 97 aa7.83□□□□□ -1.16
TPM1-219ENST00000559397 UQCR11O14957 56 aa7.79□□□□□ -1.16
TPM1-219ENST00000559397 BRK1Q8WUW1 75 aa7.79□□□□□ -1.16
TPM1-219ENST00000559397 A0A1B0GU33 70 aa7.78□□□□□ -1.16
TPM1-219ENST00000559397 ADM2Q7Z4H4 148 aa7.78□□□□□ -1.16
TPM1-219ENST00000559397 MT2AP02795 61 aa7.76□□□□□ -1.17
TPM1-219ENST00000559397 P0C880 135 aa7.76□□□□□ -1.17
TPM1-219ENST00000559397 SPATA8Q6RVD6 105 aa7.74□□□□□ -1.17
TPM1-219ENST00000559397 CDC42SE1Q9NRR8 79 aa7.74□□□□□ -1.17
TPM1-219ENST00000559397 A8MU10 97 aa7.72□□□□□ -1.17
TPM1-219ENST00000559397 MT1FP04733 61 aa7.72□□□□□ -1.17
TPM1-219ENST00000559397 MIR22HGQ0VDD5 57 aa7.71□□□□□ -1.18
TPM1-219ENST00000559397 SVIPQ8NHG7 77 aa7.67□□□□□ -1.18
TPM1-219ENST00000559397 PRO0628Q9UI54 55 aa7.67□□□□□ -1.18
TPM1-219ENST00000559397 KRTAP10-10P60014 251 aa7.66□□□□□ -1.18
TPM1-219ENST00000559397 KRTAP13-4Q3LI77 160 aa7.63□□□□□ -1.19
TPM1-219ENST00000559397 M0QZ58 72 aa7.57□□□□□ -1.2
TPM1-219ENST00000559397 KRTAP9-3Q9BYQ3 159 aa7.57□□□□□ -1.2
TPM1-219ENST00000559397 KRTAP9-2Q9BYQ4 174 aa7.5□□□□□ -1.21
TPM1-219ENST00000559397 R4GN34 69 aa7.48□□□□□ -1.21
TPM1-219ENST00000559397 USH2AO75445 5202 aa7.45□□□□□ -1.22
TPM1-219ENST00000559397 CRIPTQ9P021 101 aa7.45□□□□□ -1.22
TPM1-219ENST00000559397 A0A0D9SG42 100 aa7.44□□□□□ -1.22
TPM1-219ENST00000559397 LCE2BO14633 110 aa7.44□□□□□ -1.22
TPM1-219ENST00000559397 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
TPM1-219ENST00000559397 SPRR2GQ9BYE4 73 aa7.41□□□□□ -1.22
TPM1-219ENST00000559397 A6NN06 94 aa7.37□□□□□ -1.23
TPM1-219ENST00000559397 PMAIP1Q13794 54 aa7.37□□□□□ -1.23
TPM1-219ENST00000559397 KRTAP12-1P59990 96 aa7.35□□□□□ -1.23
TPM1-219ENST00000559397 FSIP2Q5CZC0 6907 aa7.34□□□□□ -1.23
TPM1-219ENST00000559397 K7ERS5 55 aa7.32□□□□□ -1.24
TPM1-219ENST00000559397 LINC01554Q52M75 96 aa7.32□□□□□ -1.24
TPM1-219ENST00000559397 KRTAP12-2P59991 146 aa7.32□□□□□ -1.24
TPM1-219ENST00000559397 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
TPM1-219ENST00000559397 SSPOA2VEC9 5147 aa7.28□□□□□ -1.24
TPM1-219ENST00000559397 SPINT4Q6UDR6 99 aa7.25□□□□□ -1.25
TPM1-219ENST00000559397 MT1BP07438 61 aa7.22□□□□□ -1.25
TPM1-219ENST00000559397 CRCT1Q9UGL9 99 aa7.16□□□□□ -1.26
TPM1-219ENST00000559397 KTN1-AS1Q86SY8 53 aa7.09□□□□□ -1.27
TPM1-219ENST00000559397 LOC100996750A0A140TA64 210 aa7.07□□□□□ -1.28
TPM1-219ENST00000559397 KRTAP19-6Q3LI70 58 aa7.07□□□□□ -1.28
TPM1-219ENST00000559397 KRTAP4-6Q9BYQ5 205 aa7.07□□□□□ -1.28
TPM1-219ENST00000559397 KRTAP9-6A0A140TA67 174 aa7.06□□□□□ -1.28
TPM1-219ENST00000559397 ROMO1P60602 79 aa7.06□□□□□ -1.28
TPM1-219ENST00000559397 PLAC4Q8WY50 150 aa7.03□□□□□ -1.28
TPM1-219ENST00000559397 FCGBPQ9Y6R7 5405 aaPredicted RBP7□□□□□ -1.29
TPM1-219ENST00000559397 CAMK2N1Q7Z7J9 78 aa7□□□□□ -1.29
TPM1-219ENST00000559397 C10orf95Q9H7T3 257 aa6.95□□□□□ -1.3
TPM1-219ENST00000559397 KRTAP10-5P60370 271 aa6.93□□□□□ -1.3
TPM1-219ENST00000559397 PRAC1Q96KF2 57 aa6.9□□□□□ -1.3
TPM1-219ENST00000559397 MT1XP80297 61 aa6.89□□□□□ -1.31
TPM1-219ENST00000559397 PRO2289Q9P1D8 64 aa6.82□□□□□ -1.32
TPM1-219ENST00000559397 KRTAP25-1Q3LHN0 102 aa6.76□□□□□ -1.33
TPM1-219ENST00000559397 MACF1Q9UPN3 7388 aaKnown RBP6.74□□□□□ -1.33
TPM1-219ENST00000559397 TNP1P09430 55 aa6.7□□□□□ -1.34
TPM1-219ENST00000559397 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.65□□□□□ -1.34
TPM1-219ENST00000559397 KMT2DO14686 5537 aa6.6□□□□□ -1.35
TPM1-219ENST00000559397 KRTAP10-7P60409 375 aaPredicted RBP6.59□□□□□ -1.35
TPM1-219ENST00000559397 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.35
TPM1-219ENST00000559397 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
TPM1-219ENST00000559397 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
TPM1-219ENST00000559397 PP632Q6XCG6 107 aa6.54□□□□□ -1.36
TPM1-219ENST00000559397 KRTAP4-8A0A0G2JLE6 195 aa6.44□□□□□ -1.38
TPM1-219ENST00000559397 KRTAP4-8Q9BYQ9 185 aa6.44□□□□□ -1.38
TPM1-219ENST00000559397 KRTAP9-7A8MTY7 169 aa6.42□□□□□ -1.38
TPM1-219ENST00000559397 LCE3AQ5TA76 89 aa6.42□□□□□ -1.38
TPM1-219ENST00000559397 KRTAP6-3Q3LI67 103 aa6.39□□□□□ -1.39
TPM1-219ENST00000559397 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
TPM1-219ENST00000559397 KRTAP5-9P26371 169 aa6.31□□□□□ -1.4
TPM1-219ENST00000559397 MUC12Q9UKN1 5478 aa6.3□□□□□ -1.4
TPM1-219ENST00000559397 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
TPM1-219ENST00000559397 MDN1Q9NU22 5596 aa6.19□□□□□ -1.42
TPM1-219ENST00000559397 KRTAP12-3P60328 96 aa6.17□□□□□ -1.42
TPM1-219ENST00000559397 KRTAP19-7Q3SYF9 63 aa6.17□□□□□ -1.42
TPM1-219ENST00000559397 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms