RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SPTSSBQ8NFR3 76 aa5.6□□□□□ -1.51
TPM1-210ENST00000558264 KRTAP3-1Q9BYR8 98 aa5.59□□□□□ -1.51
TPM1-210ENST00000558264 A0A1B0GU69 56 aa5.59□□□□□ -1.52
TPM1-210ENST00000558264 ATP11AUNQ6ZP68 121 aa5.57□□□□□ -1.52
TPM1-210ENST00000558264 KRTAP4-5Q9BYR2 181 aa5.57□□□□□ -1.52
TPM1-210ENST00000558264 XP32Q5T750 250 aa5.56□□□□□ -1.52
TPM1-210ENST00000558264 CDC42SE1Q9NRR8 79 aa5.53□□□□□ -1.52
TPM1-210ENST00000558264 ABCA13Q86UQ4 5058 aa5.53□□□□□ -1.52
TPM1-210ENST00000558264 RPL37P61927 97 aaKnown RBP5.52□□□□□ -1.53
TPM1-210ENST00000558264 LPAP08519 4548 aa5.5□□□□□ -1.53
TPM1-210ENST00000558264 A6NN06 94 aa5.5□□□□□ -1.53
TPM1-210ENST00000558264 COX6B2Q6YFQ2 88 aa5.49□□□□□ -1.53
TPM1-210ENST00000558264 A0A0A0MQY5 61 aa5.48□□□□□ -1.53
TPM1-210ENST00000558264 LRP2P98164 4655 aa5.48□□□□□ -1.53
TPM1-210ENST00000558264 UQCR11O14957 56 aa5.43□□□□□ -1.54
TPM1-210ENST00000558264 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
TPM1-210ENST00000558264 LORP23490 312 aaPredicted RBP5.41□□□□□ -1.54
TPM1-210ENST00000558264 BIRC6Q9NR09 4857 aa5.4□□□□□ -1.54
TPM1-210ENST00000558264 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
TPM1-210ENST00000558264 TPRXLQ17RH7 258 aa5.37□□□□□ -1.55
TPM1-210ENST00000558264 HERC2O95714 4834 aa5.36□□□□□ -1.55
TPM1-210ENST00000558264 H0YAA0 97 aa5.33□□□□□ -1.56
TPM1-210ENST00000558264 PRAC1Q96KF2 57 aa5.33□□□□□ -1.56
TPM1-210ENST00000558264 A0A1B0GU33 70 aa5.33□□□□□ -1.56
TPM1-210ENST00000558264 S4R3F8 94 aa5.33□□□□□ -1.56
TPM1-210ENST00000558264 LINC01554Q52M75 96 aa5.31□□□□□ -1.56
TPM1-210ENST00000558264 H1FX-AS1Q4G0G2 97 aa5.3□□□□□ -1.56
TPM1-210ENST00000558264 ADM2Q7Z4H4 148 aa5.28□□□□□ -1.56
TPM1-210ENST00000558264 KRTAP10-6P60371 365 aaPredicted RBP5.25□□□□□ -1.57
TPM1-210ENST00000558264 P0C880 135 aa5.22□□□□□ -1.57
TPM1-210ENST00000558264 KRTAP13-4Q3LI77 160 aa5.21□□□□□ -1.57
TPM1-210ENST00000558264 KRTAP4-1Q9BYQ7 146 aa5.21□□□□□ -1.58
TPM1-210ENST00000558264 A0A0D9SG42 100 aa5.2□□□□□ -1.58
TPM1-210ENST00000558264 PCLOQ9Y6V0 5065 aa5.19□□□□□ -1.58
TPM1-210ENST00000558264 MUC2Q02817 5179 aa5.18□□□□□ -1.58
TPM1-210ENST00000558264 SEC61BP60468 96 aaKnown RBP5.18□□□□□ -1.58
TPM1-210ENST00000558264 MUC17Q685J3 4493 aa5.17□□□□□ -1.58
TPM1-210ENST00000558264 HERC1Q15751 4861 aa5.16□□□□□ -1.58
TPM1-210ENST00000558264 CSAG1Q6PB30 78 aa5.15□□□□□ -1.59
TPM1-210ENST00000558264 K7ERS5 55 aa5.06□□□□□ -1.6
TPM1-210ENST00000558264 CRIPTQ9P021 101 aa5.05□□□□□ -1.6
TPM1-210ENST00000558264 HMCN2Q8NDA2 5059 aa5.04□□□□□ -1.6
TPM1-210ENST00000558264 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
TPM1-210ENST00000558264 KRTAP19-2Q3LHN2 52 aa5.02□□□□□ -1.61
TPM1-210ENST00000558264 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
TPM1-210ENST00000558264 SPINT4Q6UDR6 99 aa5.01□□□□□ -1.61
TPM1-210ENST00000558264 M0QZ58 72 aa4.98□□□□□ -1.61
TPM1-210ENST00000558264 KRTAP12-1P59990 96 aa4.97□□□□□ -1.61
TPM1-210ENST00000558264 ROMO1P60602 79 aa4.97□□□□□ -1.61
TPM1-210ENST00000558264 R4GN34 69 aa4.95□□□□□ -1.62
TPM1-210ENST00000558264 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
TPM1-210ENST00000558264 RNF213Q63HN8 5207 aa4.92□□□□□ -1.62
TPM1-210ENST00000558264 UBR4Q5T4S7 5183 aa4.92□□□□□ -1.62
TPM1-210ENST00000558264 KRTAP25-1Q3LHN0 102 aa4.9□□□□□ -1.63
TPM1-210ENST00000558264 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
TPM1-210ENST00000558264 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
TPM1-210ENST00000558264 M0R2T5 61 aa4.76□□□□□ -1.65
TPM1-210ENST00000558264 MT1HP80294 61 aa4.71□□□□□ -1.66
TPM1-210ENST00000558264 CAMK2N1Q7Z7J9 78 aa4.69□□□□□ -1.66
TPM1-210ENST00000558264 NDUFAF8A1L188 74 aa4.69□□□□□ -1.66
TPM1-210ENST00000558264 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
TPM1-210ENST00000558264 KRTAP4-6Q9BYQ5 205 aa4.67□□□□□ -1.66
TPM1-210ENST00000558264 MT1FP04733 61 aa4.6□□□□□ -1.67
TPM1-210ENST00000558264 KRTAP10-10P60014 251 aa4.59□□□□□ -1.67
TPM1-210ENST00000558264 MT2AP02795 61 aa4.59□□□□□ -1.67
TPM1-210ENST00000558264 KRTAP19-1Q8IUB9 90 aa4.59□□□□□ -1.67
TPM1-210ENST00000558264 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
TPM1-210ENST00000558264 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
TPM1-210ENST00000558264 SPRR2GQ9BYE4 73 aa4.55□□□□□ -1.68
TPM1-210ENST00000558264 PLAC4Q8WY50 150 aa4.5□□□□□ -1.69
TPM1-210ENST00000558264 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
TPM1-210ENST00000558264 TNP1P09430 55 aa4.44□□□□□ -1.7
TPM1-210ENST00000558264 MT1BP07438 61 aa4.38□□□□□ -1.71
TPM1-210ENST00000558264 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
TPM1-210ENST00000558264 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
TPM1-210ENST00000558264 KRTAP9-3Q9BYQ3 159 aa4.37□□□□□ -1.71
TPM1-210ENST00000558264 KRTAP4-8Q9BYQ9 185 aa4.34□□□□□ -1.71
TPM1-210ENST00000558264 USH2AO75445 5202 aa4.34□□□□□ -1.72
TPM1-210ENST00000558264 KRTAP10-5P60370 271 aa4.31□□□□□ -1.72
TPM1-210ENST00000558264 MT1XP80297 61 aa4.3□□□□□ -1.72
TPM1-210ENST00000558264 LCE3AQ5TA76 89 aa4.29□□□□□ -1.72
TPM1-210ENST00000558264 KRTAP4-12Q9BQ66 201 aa4.23□□□□□ -1.73
TPM1-210ENST00000558264 KRTAP9-2Q9BYQ4 174 aa4.22□□□□□ -1.73
TPM1-210ENST00000558264 KRTAP10-7P60409 375 aaPredicted RBP4.21□□□□□ -1.74
TPM1-210ENST00000558264 KRTAP9-6A0A140TA67 174 aa4.19□□□□□ -1.74
TPM1-210ENST00000558264 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.19□□□□□ -1.74
TPM1-210ENST00000558264 KRTAP10-12P60413 245 aa4.16□□□□□ -1.74
TPM1-210ENST00000558264 KMT2DO14686 5537 aa4.15□□□□□ -1.75
TPM1-210ENST00000558264 PRO2289Q9P1D8 64 aa4.13□□□□□ -1.75
TPM1-210ENST00000558264 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
TPM1-210ENST00000558264 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
TPM1-210ENST00000558264 FSIP2Q5CZC0 6907 aa4.09□□□□□ -1.75
TPM1-210ENST00000558264 LCE3BQ5TA77 95 aa4.09□□□□□ -1.75
TPM1-210ENST00000558264 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
TPM1-210ENST00000558264 KRTAP4-8A0A0G2JLE6 195 aa4.03□□□□□ -1.76
TPM1-210ENST00000558264 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
TPM1-210ENST00000558264 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
TPM1-210ENST00000558264 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
TPM1-210ENST00000558264 SSPOA2VEC9 5147 aa4□□□□□ -1.77
TPM1-210ENST00000558264 KRTAP19-5Q3LI72 72 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms