RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 DMAC1Q96GE9 116 aa8.34□□□□□ -1.07
PSEN1-218ENST00000556864 KRTAP9-2Q9BYQ4 174 aa8.32□□□□□ -1.08
PSEN1-218ENST00000556864 COX7CP15954 63 aa8.31□□□□□ -1.08
PSEN1-218ENST00000556864 NDUFC1O43677 76 aa8.3□□□□□ -1.08
PSEN1-218ENST00000556864 MT1FP04733 61 aa8.29□□□□□ -1.08
PSEN1-218ENST00000556864 KRTAP10-10P60014 251 aa8.29□□□□□ -1.08
PSEN1-218ENST00000556864 ANAPC13Q9BS18 74 aa8.27□□□□□ -1.09
PSEN1-218ENST00000556864 SPANXA2-OT1Q8N9U9 137 aa8.23□□□□□ -1.09
PSEN1-218ENST00000556864 ACYP2P14621 99 aa8.22□□□□□ -1.09
PSEN1-218ENST00000556864 LCE2BO14633 110 aa8.13□□□□□ -1.11
PSEN1-218ENST00000556864 CHKB-CPT1BH3BT56 60 aa8.12□□□□□ -1.11
PSEN1-218ENST00000556864 SPTSSBQ8NFR3 76 aa8.12□□□□□ -1.11
PSEN1-218ENST00000556864 KRTAP9-3Q9BYQ3 159 aa8.12□□□□□ -1.11
PSEN1-218ENST00000556864 H0YAA0 97 aa8.11□□□□□ -1.11
PSEN1-218ENST00000556864 H7BZZ5 65 aa8.07□□□□□ -1.12
PSEN1-218ENST00000556864 CYSTM1Q9H1C7 97 aa8.04□□□□□ -1.12
PSEN1-218ENST00000556864 CCDC179H3BU77 68 aa8.02□□□□□ -1.13
PSEN1-218ENST00000556864 ADM2Q7Z4H4 148 aa8□□□□□ -1.13
PSEN1-218ENST00000556864 CRIPTQ9P021 101 aa8□□□□□ -1.13
PSEN1-218ENST00000556864 USH2AO75445 5202 aa7.97□□□□□ -1.13
PSEN1-218ENST00000556864 COA5Q86WW8 74 aa7.97□□□□□ -1.13
PSEN1-218ENST00000556864 FSIP2Q5CZC0 6907 aa7.96□□□□□ -1.13
PSEN1-218ENST00000556864 CRCT1Q9UGL9 99 aa7.94□□□□□ -1.14
PSEN1-218ENST00000556864 KRTAP9-6A0A140TA67 174 aa7.93□□□□□ -1.14
PSEN1-218ENST00000556864 ATP5EP56381 51 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-218ENST00000556864 KRTAP19-1Q8IUB9 90 aa7.9□□□□□ -1.14
PSEN1-218ENST00000556864 SPRR2GQ9BYE4 73 aa7.9□□□□□ -1.14
PSEN1-218ENST00000556864 P0C880 135 aa7.84□□□□□ -1.15
PSEN1-218ENST00000556864 TMEM258P61165 79 aa7.83□□□□□ -1.16
PSEN1-218ENST00000556864 SSPOA2VEC9 5147 aa7.82□□□□□ -1.16
PSEN1-218ENST00000556864 PCP4P48539 62 aa7.81□□□□□ -1.16
PSEN1-218ENST00000556864 Q5VV11 94 aa7.81□□□□□ -1.16
PSEN1-218ENST00000556864 R4GN34 69 aa7.8□□□□□ -1.16
PSEN1-218ENST00000556864 KRTAP19-8Q3LI54 63 aa7.79□□□□□ -1.16
PSEN1-218ENST00000556864 M0QZ58 72 aa7.76□□□□□ -1.17
PSEN1-218ENST00000556864 SEC61GP60059 68 aa7.73□□□□□ -1.17
PSEN1-218ENST00000556864 MT1BP07438 61 aa7.71□□□□□ -1.18
PSEN1-218ENST00000556864 KRTAP19-6Q3LI70 58 aa7.7□□□□□ -1.18
PSEN1-218ENST00000556864 SERP1Q9Y6X1 66 aa7.69□□□□□ -1.18
PSEN1-218ENST00000556864 H3BS24 57 aa7.66□□□□□ -1.18
PSEN1-218ENST00000556864 LINC01554Q52M75 96 aa7.6□□□□□ -1.19
PSEN1-218ENST00000556864 A0A1B0GU69 56 aa7.58□□□□□ -1.2
PSEN1-218ENST00000556864 PLAC4Q8WY50 150 aa7.57□□□□□ -1.2
PSEN1-218ENST00000556864 FCGBPQ9Y6R7 5405 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-218ENST00000556864 PRR15LQ9BU68 103 aa7.53□□□□□ -1.2
PSEN1-218ENST00000556864 A6NN06 94 aa7.52□□□□□ -1.21
PSEN1-218ENST00000556864 A0A1B0GU33 70 aa7.5□□□□□ -1.21
PSEN1-218ENST00000556864 KRTAP10-5P60370 271 aa7.48□□□□□ -1.21
PSEN1-218ENST00000556864 KRTAP13-4Q3LI77 160 aa7.47□□□□□ -1.21
PSEN1-218ENST00000556864 SVIPQ8NHG7 77 aa7.46□□□□□ -1.22
PSEN1-218ENST00000556864 LINC01558Q9Y6Z2 57 aa7.46□□□□□ -1.22
PSEN1-218ENST00000556864 PRO2289Q9P1D8 64 aa7.44□□□□□ -1.22
PSEN1-218ENST00000556864 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.38□□□□□ -1.23
PSEN1-218ENST00000556864 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
PSEN1-218ENST00000556864 V9GYY9 64 aa7.35□□□□□ -1.23
PSEN1-218ENST00000556864 SMIM26A0A096LP01 95 aa7.33□□□□□ -1.24
PSEN1-218ENST00000556864 A0A0D9SG42 100 aa7.33□□□□□ -1.24
PSEN1-218ENST00000556864 MT1XP80297 61 aa7.33□□□□□ -1.24
PSEN1-218ENST00000556864 MACF1Q9UPN3 7388 aaKnown RBP7.3□□□□□ -1.24
PSEN1-218ENST00000556864 CAMK2N1Q7Z7J9 78 aa7.26□□□□□ -1.25
PSEN1-218ENST00000556864 Q1T7F1 81 aa7.25□□□□□ -1.25
PSEN1-218ENST00000556864 RPS28P62857 69 aaKnown RBP7.24□□□□□ -1.25
PSEN1-218ENST00000556864 UQCR11O14957 56 aa7.23□□□□□ -1.25
PSEN1-218ENST00000556864 SPINT4Q6UDR6 99 aa7.23□□□□□ -1.25
PSEN1-218ENST00000556864 KRTAP12-1P59990 96 aa7.19□□□□□ -1.26
PSEN1-218ENST00000556864 A8MU10 97 aa7.18□□□□□ -1.26
PSEN1-218ENST00000556864 KRTAP9-7A8MTY7 169 aa7.17□□□□□ -1.26
PSEN1-218ENST00000556864 PSPHP1O15172 72 aa7.17□□□□□ -1.26
PSEN1-218ENST00000556864 KRTAP12-2P59991 146 aa7.13□□□□□ -1.27
PSEN1-218ENST00000556864 SYNE2Q8WXH0 6885 aaKnown RBP7.11□□□□□ -1.27
PSEN1-218ENST00000556864 MIR22HGQ0VDD5 57 aa7.1□□□□□ -1.27
PSEN1-218ENST00000556864 KRTAP6-3Q3LI67 103 aa7.04□□□□□ -1.28
PSEN1-218ENST00000556864 A6NED7 52 aa6.99□□□□□ -1.29
PSEN1-218ENST00000556864 KRTAP10-7P60409 375 aaPredicted RBP6.99□□□□□ -1.29
PSEN1-218ENST00000556864 KRTAP10-12P60413 245 aa6.98□□□□□ -1.29
PSEN1-218ENST00000556864 K7ERS5 55 aa6.96□□□□□ -1.3
PSEN1-218ENST00000556864 KRTAP8-1Q8IUC2 63 aa6.92□□□□□ -1.3
PSEN1-218ENST00000556864 KRTAP5-9P26371 169 aa6.88□□□□□ -1.31
PSEN1-218ENST00000556864 KRTAP4-8A0A0G2JLE6 195 aa6.83□□□□□ -1.32
PSEN1-218ENST00000556864 KRTAP4-8Q9BYQ9 185 aa6.83□□□□□ -1.32
PSEN1-218ENST00000556864 KMT2DO14686 5537 aa6.82□□□□□ -1.32
PSEN1-218ENST00000556864 C10orf95Q9H7T3 257 aa6.81□□□□□ -1.32
PSEN1-218ENST00000556864 TNP1P09430 55 aa6.79□□□□□ -1.32
PSEN1-218ENST00000556864 SPRR2FQ96RM1 72 aa6.79□□□□□ -1.32
PSEN1-218ENST00000556864 CDC42SE1Q9NRR8 79 aa6.76□□□□□ -1.33
PSEN1-218ENST00000556864 NEBP20929 6669 aa6.73□□□□□ -1.33
PSEN1-218ENST00000556864 MUC12Q9UKN1 5478 aa6.7□□□□□ -1.34
PSEN1-218ENST00000556864 MDN1Q9NU22 5596 aa6.63□□□□□ -1.35
PSEN1-218ENST00000556864 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
PSEN1-218ENST00000556864 SPRR2EP22531 72 aa6.61□□□□□ -1.35
PSEN1-218ENST00000556864 SPRR2BP35325 72 aa6.61□□□□□ -1.35
PSEN1-218ENST00000556864 SPRR2AP35326 72 aa6.61□□□□□ -1.35
PSEN1-218ENST00000556864 LCE3AQ5TA76 89 aa6.56□□□□□ -1.36
PSEN1-218ENST00000556864 KRTAP19-7Q3SYF9 63 aa6.54□□□□□ -1.36
PSEN1-218ENST00000556864 LCE1AQ5T7P2 110 aa6.53□□□□□ -1.36
PSEN1-218ENST00000556864 ROMO1P60602 79 aa6.5□□□□□ -1.37
PSEN1-218ENST00000556864 KRTAP19-5Q3LI72 72 aa6.49□□□□□ -1.37
PSEN1-218ENST00000556864 MT1EP04732 61 aa6.48□□□□□ -1.37
PSEN1-218ENST00000556864 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
PSEN1-218ENST00000556864 BRK1Q8WUW1 75 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms