RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 DMAC1Q96GE9 116 aa11.38□□□□□ -0.59
RCCD1-206ENST00000556618 COX7CP15954 63 aa11.37□□□□□ -0.59
RCCD1-206ENST00000556618 KRTAP10-10P60014 251 aa11.36□□□□□ -0.59
RCCD1-206ENST00000556618 NDUFC1O43677 76 aa11.29□□□□□ -0.6
RCCD1-206ENST00000556618 PCP4P48539 62 aa11.27□□□□□ -0.61
RCCD1-206ENST00000556618 ANAPC13Q9BS18 74 aa11.27□□□□□ -0.61
RCCD1-206ENST00000556618 SPANXA2-OT1Q8N9U9 137 aa11.23□□□□□ -0.61
RCCD1-206ENST00000556618 ACYP2P14621 99 aa11.22□□□□□ -0.61
RCCD1-206ENST00000556618 KRTAP9-3Q9BYQ3 159 aa11.21□□□□□ -0.61
RCCD1-206ENST00000556618 CYSTM1Q9H1C7 97 aa11.11□□□□□ -0.63
RCCD1-206ENST00000556618 FSIP2Q5CZC0 6907 aa11.09□□□□□ -0.63
RCCD1-206ENST00000556618 H7BZZ5 65 aa11.07□□□□□ -0.64
RCCD1-206ENST00000556618 H0YAA0 97 aa11.04□□□□□ -0.64
RCCD1-206ENST00000556618 CCDC179H3BU77 68 aa11.03□□□□□ -0.64
RCCD1-206ENST00000556618 LCE2BO14633 110 aa11.03□□□□□ -0.64
RCCD1-206ENST00000556618 USH2AO75445 5202 aa11.02□□□□□ -0.64
RCCD1-206ENST00000556618 CHKB-CPT1BH3BT56 60 aa11□□□□□ -0.65
RCCD1-206ENST00000556618 SPTSSBQ8NFR3 76 aa10.95□□□□□ -0.66
RCCD1-206ENST00000556618 ADM2Q7Z4H4 148 aa10.94□□□□□ -0.66
RCCD1-206ENST00000556618 KRTAP19-1Q8IUB9 90 aa10.9□□□□□ -0.67
RCCD1-206ENST00000556618 COA5Q86WW8 74 aa10.88□□□□□ -0.67
RCCD1-206ENST00000556618 CRCT1Q9UGL9 99 aa10.88□□□□□ -0.67
RCCD1-206ENST00000556618 CRIPTQ9P021 101 aa10.86□□□□□ -0.67
RCCD1-206ENST00000556618 SPRR2GQ9BYE4 73 aa10.85□□□□□ -0.67
RCCD1-206ENST00000556618 KRTAP9-6A0A140TA67 174 aa10.83□□□□□ -0.68
RCCD1-206ENST00000556618 SSPOA2VEC9 5147 aa10.82□□□□□ -0.68
RCCD1-206ENST00000556618 KRTAP3-2Q9BYR7 98 aa10.81□□□□□ -0.68
RCCD1-206ENST00000556618 P0C880 135 aa10.79□□□□□ -0.68
RCCD1-206ENST00000556618 ATP5EP56381 51 aaPredicted RBP10.69□□□□□ -0.7
RCCD1-206ENST00000556618 KRTAP19-8Q3LI54 63 aa10.69□□□□□ -0.7
RCCD1-206ENST00000556618 TMEM258P61165 79 aa10.63□□□□□ -0.71
RCCD1-206ENST00000556618 Q5VV11 94 aa10.62□□□□□ -0.71
RCCD1-206ENST00000556618 R4GN34 69 aa10.62□□□□□ -0.71
RCCD1-206ENST00000556618 MT1BP07438 61 aa10.61□□□□□ -0.71
RCCD1-206ENST00000556618 M0QZ58 72 aa10.56□□□□□ -0.72
RCCD1-206ENST00000556618 KRTAP19-6Q3LI70 58 aa10.54□□□□□ -0.72
RCCD1-206ENST00000556618 FCGBPQ9Y6R7 5405 aaPredicted RBP10.49□□□□□ -0.73
RCCD1-206ENST00000556618 SEC61GP60059 68 aa10.47□□□□□ -0.73
RCCD1-206ENST00000556618 SERP1Q9Y6X1 66 aa10.43□□□□□ -0.74
RCCD1-206ENST00000556618 LINC01554Q52M75 96 aa10.39□□□□□ -0.75
RCCD1-206ENST00000556618 KRTAP13-4Q3LI77 160 aa10.31□□□□□ -0.76
RCCD1-206ENST00000556618 A0A1B0GU69 56 aa10.31□□□□□ -0.76
RCCD1-206ENST00000556618 PLAC4Q8WY50 150 aa10.31□□□□□ -0.76
RCCD1-206ENST00000556618 RPS28P62857 69 aaKnown RBP10.3□□□□□ -0.76
RCCD1-206ENST00000556618 A6NN06 94 aa10.26□□□□□ -0.77
RCCD1-206ENST00000556618 A0A1B0GU33 70 aa10.25□□□□□ -0.77
RCCD1-206ENST00000556618 KRTAP10-5P60370 271 aa10.24□□□□□ -0.77
RCCD1-206ENST00000556618 LINC01558Q9Y6Z2 57 aa10.22□□□□□ -0.77
RCCD1-206ENST00000556618 PRR15LQ9BU68 103 aa10.15□□□□□ -0.78
RCCD1-206ENST00000556618 SPATA8Q6RVD6 105 aa10.14□□□□□ -0.79
RCCD1-206ENST00000556618 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.1□□□□□ -0.79
RCCD1-206ENST00000556618 MT1XP80297 61 aa10.09□□□□□ -0.79
RCCD1-206ENST00000556618 MACF1Q9UPN3 7388 aaKnown RBP10.08□□□□□ -0.8
RCCD1-206ENST00000556618 PRO2289Q9P1D8 64 aa10.06□□□□□ -0.8
RCCD1-206ENST00000556618 A0A0D9SG42 100 aa10.04□□□□□ -0.8
RCCD1-206ENST00000556618 SMIM26A0A096LP01 95 aa9.98□□□□□ -0.81
RCCD1-206ENST00000556618 V9GYY9 64 aa9.95□□□□□ -0.82
RCCD1-206ENST00000556618 Q1T7F1 81 aa9.93□□□□□ -0.82
RCCD1-206ENST00000556618 SYNE2Q8WXH0 6885 aaKnown RBP9.9□□□□□ -0.83
RCCD1-206ENST00000556618 A8MU10 97 aa9.88□□□□□ -0.83
RCCD1-206ENST00000556618 KRTAP12-1P59990 96 aa9.87□□□□□ -0.83
RCCD1-206ENST00000556618 SPINT4Q6UDR6 99 aa9.86□□□□□ -0.83
RCCD1-206ENST00000556618 UQCR11O14957 56 aa9.84□□□□□ -0.83
RCCD1-206ENST00000556618 CAMK2N1Q7Z7J9 78 aa9.84□□□□□ -0.83
RCCD1-206ENST00000556618 PSPHP1O15172 72 aa9.82□□□□□ -0.84
RCCD1-206ENST00000556618 KRTAP9-7A8MTY7 169 aa9.81□□□□□ -0.84
RCCD1-206ENST00000556618 KRTAP12-2P59991 146 aa9.8□□□□□ -0.84
RCCD1-206ENST00000556618 MIR22HGQ0VDD5 57 aa9.67□□□□□ -0.86
RCCD1-206ENST00000556618 KRTAP10-7P60409 375 aaPredicted RBP9.64□□□□□ -0.87
RCCD1-206ENST00000556618 KRTAP6-3Q3LI67 103 aa9.64□□□□□ -0.87
RCCD1-206ENST00000556618 KMT2DO14686 5537 aa9.63□□□□□ -0.87
RCCD1-206ENST00000556618 KRTAP10-12P60413 245 aa9.58□□□□□ -0.88
RCCD1-206ENST00000556618 A6NED7 52 aa9.5□□□□□ -0.89
RCCD1-206ENST00000556618 KRTAP4-8A0A0G2JLE6 195 aa9.48□□□□□ -0.89
RCCD1-206ENST00000556618 KRTAP4-8Q9BYQ9 185 aa9.48□□□□□ -0.89
RCCD1-206ENST00000556618 KRTAP5-9P26371 169 aa9.44□□□□□ -0.9
RCCD1-206ENST00000556618 KRTAP8-1Q8IUC2 63 aa9.43□□□□□ -0.9
RCCD1-206ENST00000556618 C10orf95Q9H7T3 257 aa9.39□□□□□ -0.91
RCCD1-206ENST00000556618 K7ERS5 55 aa9.36□□□□□ -0.91
RCCD1-206ENST00000556618 MUC12Q9UKN1 5478 aa9.35□□□□□ -0.91
RCCD1-206ENST00000556618 SPRR2FQ96RM1 72 aa9.29□□□□□ -0.92
RCCD1-206ENST00000556618 TNP1P09430 55 aa9.23□□□□□ -0.93
RCCD1-206ENST00000556618 NEBP20929 6669 aa9.22□□□□□ -0.93
RCCD1-206ENST00000556618 CDC42SE1Q9NRR8 79 aa9.21□□□□□ -0.93
RCCD1-206ENST00000556618 MDN1Q9NU22 5596 aa9.19□□□□□ -0.94
RCCD1-206ENST00000556618 BRK1Q8WUW1 75 aa9.15□□□□□ -0.95
RCCD1-206ENST00000556618 SVIPQ8NHG7 77 aa9.05□□□□□ -0.96
RCCD1-206ENST00000556618 PRO0628Q9UI54 55 aa9.03□□□□□ -0.96
RCCD1-206ENST00000556618 SPRR2EP22531 72 aa9.01□□□□□ -0.97
RCCD1-206ENST00000556618 SPRR2BP35325 72 aa9.01□□□□□ -0.97
RCCD1-206ENST00000556618 SPRR2AP35326 72 aa9.01□□□□□ -0.97
RCCD1-206ENST00000556618 KRTAP19-7Q3SYF9 63 aa9.01□□□□□ -0.97
RCCD1-206ENST00000556618 LCE3AQ5TA76 89 aa9.01□□□□□ -0.97
RCCD1-206ENST00000556618 KRTAP25-1Q3LHN0 102 aa8.99□□□□□ -0.97
RCCD1-206ENST00000556618 LCE1AQ5T7P2 110 aa8.99□□□□□ -0.97
RCCD1-206ENST00000556618 KRTAP19-5Q3LI72 72 aa8.93□□□□□ -0.98
RCCD1-206ENST00000556618 MT1EP04732 61 aa8.9□□□□□ -0.99
RCCD1-206ENST00000556618 ROMO1P60602 79 aa8.86□□□□□ -0.99
RCCD1-206ENST00000556618 SPRR2DP22532 72 aa8.7□□□□□ -1.02
RCCD1-206ENST00000556618 KRTAP19-3Q7Z4W3 81 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms