RNA–Protein interactions for RNA: ENST00000556416.1

CLMN-205, Transcript of calmin, humanhuman

TSL 2

Gene CLMN, Length 1,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-205ENST00000556416 LCA10Q71F78 164 aa11.49□□□□□ -0.57
CLMN-205ENST00000556416 FLGP20930 4061 aaPredicted RBP11.49□□□□□ -0.57
CLMN-205ENST00000556416 CHKB-CPT1BH3BT56 60 aa11.47□□□□□ -0.57
CLMN-205ENST00000556416 FAT4Q6V0I7 4981 aa11.42□□□□□ -0.58
CLMN-205ENST00000556416 KRTAP3-3Q9BYR6 98 aa11.42□□□□□ -0.58
CLMN-205ENST00000556416 MT1HP80294 61 aa11.41□□□□□ -0.58
CLMN-205ENST00000556416 SERP1Q9Y6X1 66 aa11.41□□□□□ -0.58
CLMN-205ENST00000556416 CSAG1Q6PB30 78 aa11.3□□□□□ -0.6
CLMN-205ENST00000556416 SPTSSBQ8NFR3 76 aa11.3□□□□□ -0.6
CLMN-205ENST00000556416 M0R2T5 61 aa11.28□□□□□ -0.6
CLMN-205ENST00000556416 RPS28P62857 69 aaKnown RBP11.22□□□□□ -0.61
CLMN-205ENST00000556416 LCE2AQ5TA79 106 aaPredicted RBP11.18□□□□□ -0.62
CLMN-205ENST00000556416 SMIM26A0A096LP01 95 aa11.05□□□□□ -0.64
CLMN-205ENST00000556416 KRTAP10-6P60371 365 aaPredicted RBP11.04□□□□□ -0.64
CLMN-205ENST00000556416 KRTAP3-2Q9BYR7 98 aa11.03□□□□□ -0.64
CLMN-205ENST00000556416 H0YAA0 97 aa11.01□□□□□ -0.65
CLMN-205ENST00000556416 LORP23490 312 aaPredicted RBP10.98□□□□□ -0.65
CLMN-205ENST00000556416 ADM2Q7Z4H4 148 aa10.98□□□□□ -0.65
CLMN-205ENST00000556416 LINC01558Q9Y6Z2 57 aa10.97□□□□□ -0.65
CLMN-205ENST00000556416 KRTAP9-8Q9BYQ0 159 aa10.94□□□□□ -0.66
CLMN-205ENST00000556416 SEC61GP60059 68 aa10.92□□□□□ -0.66
CLMN-205ENST00000556416 Q1T7F1 81 aa10.92□□□□□ -0.66
CLMN-205ENST00000556416 A0A1B0GU69 56 aa10.9□□□□□ -0.66
CLMN-205ENST00000556416 V9GYY9 64 aa10.9□□□□□ -0.66
CLMN-205ENST00000556416 MT2AP02795 61 aa10.9□□□□□ -0.67
CLMN-205ENST00000556416 P0C880 135 aa10.89□□□□□ -0.67
CLMN-205ENST00000556416 PRR15LQ9BU68 103 aa10.83□□□□□ -0.68
CLMN-205ENST00000556416 MT1FP04733 61 aa10.82□□□□□ -0.68
CLMN-205ENST00000556416 KRTAP10-10P60014 251 aa10.79□□□□□ -0.68
CLMN-205ENST00000556416 PSPHP1O15172 72 aa10.77□□□□□ -0.69
CLMN-205ENST00000556416 A0A1B0GU33 70 aa10.67□□□□□ -0.7
CLMN-205ENST00000556416 Q5VV11 94 aa10.67□□□□□ -0.7
CLMN-205ENST00000556416 CRIPTQ9P021 101 aa10.65□□□□□ -0.71
CLMN-205ENST00000556416 R4GN34 69 aa10.61□□□□□ -0.71
CLMN-205ENST00000556416 M0QZ58 72 aa10.59□□□□□ -0.71
CLMN-205ENST00000556416 KRTAP13-4Q3LI77 160 aa10.57□□□□□ -0.72
CLMN-205ENST00000556416 KRTAP9-3Q9BYQ3 159 aa10.56□□□□□ -0.72
CLMN-205ENST00000556416 SPATA8Q6RVD6 105 aa10.52□□□□□ -0.72
CLMN-205ENST00000556416 KRTAP19-1Q8IUB9 90 aa10.52□□□□□ -0.73
CLMN-205ENST00000556416 UQCR11O14957 56 aa10.51□□□□□ -0.73
CLMN-205ENST00000556416 SPRR2GQ9BYE4 73 aa10.51□□□□□ -0.73
CLMN-205ENST00000556416 A6NED7 52 aa10.44□□□□□ -0.74
CLMN-205ENST00000556416 LINC01554Q52M75 96 aa10.41□□□□□ -0.74
CLMN-205ENST00000556416 MIR22HGQ0VDD5 57 aa10.37□□□□□ -0.75
CLMN-205ENST00000556416 A0A0D9SG42 100 aa10.34□□□□□ -0.75
CLMN-205ENST00000556416 A8MU10 97 aa10.34□□□□□ -0.75
CLMN-205ENST00000556416 LCE2BO14633 110 aa10.32□□□□□ -0.76
CLMN-205ENST00000556416 KRTAP19-8Q3LI54 63 aa10.29□□□□□ -0.76
CLMN-205ENST00000556416 CDC42SE1Q9NRR8 79 aa10.2□□□□□ -0.78
CLMN-205ENST00000556416 A6NN06 94 aa10.19□□□□□ -0.78
CLMN-205ENST00000556416 MT1BP07438 61 aa10.18□□□□□ -0.78
CLMN-205ENST00000556416 KRTAP12-1P59990 96 aa10.14□□□□□ -0.79
CLMN-205ENST00000556416 SPINT4Q6UDR6 99 aa10.11□□□□□ -0.79
CLMN-205ENST00000556416 KRTAP12-2P59991 146 aa10.11□□□□□ -0.79
CLMN-205ENST00000556416 BRK1Q8WUW1 75 aa10.09□□□□□ -0.79
CLMN-205ENST00000556416 PLAC4Q8WY50 150 aa10.09□□□□□ -0.79
CLMN-205ENST00000556416 USH2AO75445 5202 aa10.06□□□□□ -0.8
CLMN-205ENST00000556416 KRTAP9-2Q9BYQ4 174 aa10.03□□□□□ -0.8
CLMN-205ENST00000556416 K7ERS5 55 aa9.95□□□□□ -0.82
CLMN-205ENST00000556416 CAMK2N1Q7Z7J9 78 aa9.91□□□□□ -0.82
CLMN-205ENST00000556416 MT1XP80297 61 aa9.78□□□□□ -0.84
CLMN-205ENST00000556416 FSIP2Q5CZC0 6907 aa9.77□□□□□ -0.85
CLMN-205ENST00000556416 KRTAP19-6Q3LI70 58 aa9.76□□□□□ -0.85
CLMN-205ENST00000556416 SSPOA2VEC9 5147 aa9.76□□□□□ -0.85
CLMN-205ENST00000556416 KRTAP10-5P60370 271 aa9.75□□□□□ -0.85
CLMN-205ENST00000556416 SVIPQ8NHG7 77 aa9.75□□□□□ -0.85
CLMN-205ENST00000556416 PRO2289Q9P1D8 64 aa9.7□□□□□ -0.86
CLMN-205ENST00000556416 PRO0628Q9UI54 55 aa9.68□□□□□ -0.86
CLMN-205ENST00000556416 CRCT1Q9UGL9 99 aa9.63□□□□□ -0.87
CLMN-205ENST00000556416 C10orf95Q9H7T3 257 aa9.61□□□□□ -0.87
CLMN-205ENST00000556416 PMAIP1Q13794 54 aa9.52□□□□□ -0.89
CLMN-205ENST00000556416 ROMO1P60602 79 aa9.5□□□□□ -0.89
CLMN-205ENST00000556416 FCGBPQ9Y6R7 5405 aaPredicted RBP9.43□□□□□ -0.9
CLMN-205ENST00000556416 KRTAP10-7P60409 375 aaPredicted RBP9.37□□□□□ -0.91
CLMN-205ENST00000556416 KRTAP9-6A0A140TA67 174 aa9.37□□□□□ -0.91
CLMN-205ENST00000556416 TNP1P09430 55 aa9.37□□□□□ -0.91
CLMN-205ENST00000556416 KRTAP25-1Q3LHN0 102 aa9.3□□□□□ -0.92
CLMN-205ENST00000556416 KRTAP10-12P60413 245 aa9.27□□□□□ -0.92
CLMN-205ENST00000556416 KRTAP4-8A0A0G2JLE6 195 aa9.08□□□□□ -0.96
CLMN-205ENST00000556416 KRTAP4-8Q9BYQ9 185 aa9.08□□□□□ -0.96
CLMN-205ENST00000556416 LCE3AQ5TA76 89 aa9.05□□□□□ -0.96
CLMN-205ENST00000556416 KTN1-AS1Q86SY8 53 aa9.03□□□□□ -0.96
CLMN-205ENST00000556416 KMT2DO14686 5537 aa9.01□□□□□ -0.97
CLMN-205ENST00000556416 PRAC1Q96KF2 57 aa8.98□□□□□ -0.97
CLMN-205ENST00000556416 KRTAP23-1A1A580 65 aa8.96□□□□□ -0.98
CLMN-205ENST00000556416 MACF1Q9UPN3 7388 aaKnown RBP8.95□□□□□ -0.98
CLMN-205ENST00000556416 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.94□□□□□ -0.98
CLMN-205ENST00000556416 KRTAP8-1Q8IUC2 63 aa8.91□□□□□ -0.98
CLMN-205ENST00000556416 PP632Q6XCG6 107 aa8.89□□□□□ -0.99
CLMN-205ENST00000556416 KRTAP19-5Q3LI72 72 aa8.77□□□□□ -1.01
CLMN-205ENST00000556416 KRTAP19-7Q3SYF9 63 aa8.73□□□□□ -1.01
CLMN-205ENST00000556416 SYNE2Q8WXH0 6885 aaKnown RBP8.73□□□□□ -1.01
CLMN-205ENST00000556416 KRTAP12-3P60328 96 aa8.68□□□□□ -1.02
CLMN-205ENST00000556416 SPRR2FQ96RM1 72 aa8.65□□□□□ -1.02
CLMN-205ENST00000556416 KRTAP5-9P26371 169 aa8.64□□□□□ -1.03
CLMN-205ENST00000556416 KRTAP6-3Q3LI67 103 aa8.63□□□□□ -1.03
CLMN-205ENST00000556416 MT1EP04732 61 aa8.6□□□□□ -1.03
CLMN-205ENST00000556416 KRTAP9-7A8MTY7 169 aa8.53□□□□□ -1.04
CLMN-205ENST00000556416 KRTAP15-1Q3LI76 137 aa8.43□□□□□ -1.06
CLMN-205ENST00000556416 MUC12Q9UKN1 5478 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms