RNA–Protein interactions for RNA: ENST00000555619.5

NPC2-207, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPC2, Length 1,035 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-207ENST00000555619 S4R3F8 94 aa12.61□□□□□ -0.39
NPC2-207ENST00000555619 ACYP2P14621 99 aa12.55□□□□□ -0.4
NPC2-207ENST00000555619 LCA10Q71F78 164 aa12.55□□□□□ -0.4
NPC2-207ENST00000555619 PCP4P48539 62 aa12.53□□□□□ -0.4
NPC2-207ENST00000555619 CSAG1Q6PB30 78 aa12.41□□□□□ -0.42
NPC2-207ENST00000555619 KRTAP10-6P60371 365 aaPredicted RBP12.39□□□□□ -0.43
NPC2-207ENST00000555619 CHKB-CPT1BH3BT56 60 aa12.35□□□□□ -0.43
NPC2-207ENST00000555619 TMEM258P61165 79 aa12.34□□□□□ -0.43
NPC2-207ENST00000555619 LORP23490 312 aaPredicted RBP12.32□□□□□ -0.44
NPC2-207ENST00000555619 COA5Q86WW8 74 aa12.32□□□□□ -0.44
NPC2-207ENST00000555619 ATP5EP56381 51 aaPredicted RBP12.31□□□□□ -0.44
NPC2-207ENST00000555619 KRTAP9-8Q9BYQ0 159 aa12.23□□□□□ -0.45
NPC2-207ENST00000555619 SPTSSBQ8NFR3 76 aa12.2□□□□□ -0.46
NPC2-207ENST00000555619 MT2AP02795 61 aa12.16□□□□□ -0.46
NPC2-207ENST00000555619 MT1FP04733 61 aa12.07□□□□□ -0.48
NPC2-207ENST00000555619 KRTAP10-10P60014 251 aa12.06□□□□□ -0.48
NPC2-207ENST00000555619 H0YAA0 97 aa12.01□□□□□ -0.49
NPC2-207ENST00000555619 ADM2Q7Z4H4 148 aa12.01□□□□□ -0.49
NPC2-207ENST00000555619 SERP1Q9Y6X1 66 aa11.99□□□□□ -0.49
NPC2-207ENST00000555619 P0C880 135 aa11.86□□□□□ -0.51
NPC2-207ENST00000555619 KRTAP9-3Q9BYQ3 159 aa11.81□□□□□ -0.52
NPC2-207ENST00000555619 SEC61GP60059 68 aa11.74□□□□□ -0.53
NPC2-207ENST00000555619 RPS28P62857 69 aaKnown RBP11.7□□□□□ -0.54
NPC2-207ENST00000555619 CRIPTQ9P021 101 aa11.7□□□□□ -0.54
NPC2-207ENST00000555619 A0A1B0GU69 56 aa11.66□□□□□ -0.54
NPC2-207ENST00000555619 LINC01558Q9Y6Z2 57 aa11.66□□□□□ -0.54
NPC2-207ENST00000555619 KRTAP19-1Q8IUB9 90 aa11.65□□□□□ -0.54
NPC2-207ENST00000555619 SMIM26A0A096LP01 95 aa11.6□□□□□ -0.55
NPC2-207ENST00000555619 SPRR2GQ9BYE4 73 aa11.59□□□□□ -0.55
NPC2-207ENST00000555619 LCE2BO14633 110 aa11.58□□□□□ -0.56
NPC2-207ENST00000555619 R4GN34 69 aa11.58□□□□□ -0.56
NPC2-207ENST00000555619 M0QZ58 72 aa11.56□□□□□ -0.56
NPC2-207ENST00000555619 KRTAP9-2Q9BYQ4 174 aa11.55□□□□□ -0.56
NPC2-207ENST00000555619 PRR15LQ9BU68 103 aa11.53□□□□□ -0.56
NPC2-207ENST00000555619 A0A1B0GU33 70 aa11.49□□□□□ -0.57
NPC2-207ENST00000555619 Q1T7F1 81 aa11.49□□□□□ -0.57
NPC2-207ENST00000555619 V9GYY9 64 aa11.48□□□□□ -0.57
NPC2-207ENST00000555619 KRTAP13-4Q3LI77 160 aa11.43□□□□□ -0.58
NPC2-207ENST00000555619 KRTAP19-8Q3LI54 63 aa11.4□□□□□ -0.58
NPC2-207ENST00000555619 LINC01554Q52M75 96 aa11.39□□□□□ -0.59
NPC2-207ENST00000555619 USH2AO75445 5202 aa11.37□□□□□ -0.59
NPC2-207ENST00000555619 PSPHP1O15172 72 aa11.37□□□□□ -0.59
NPC2-207ENST00000555619 SPATA8Q6RVD6 105 aa11.34□□□□□ -0.59
NPC2-207ENST00000555619 Q5VV11 94 aa11.33□□□□□ -0.6
NPC2-207ENST00000555619 MT1BP07438 61 aa11.3□□□□□ -0.6
NPC2-207ENST00000555619 A0A0D9SG42 100 aa11.2□□□□□ -0.62
NPC2-207ENST00000555619 UQCR11O14957 56 aa11.18□□□□□ -0.62
NPC2-207ENST00000555619 FSIP2Q5CZC0 6907 aa11.17□□□□□ -0.62
NPC2-207ENST00000555619 PLAC4Q8WY50 150 aa11.14□□□□□ -0.63
NPC2-207ENST00000555619 A8MU10 97 aa11.11□□□□□ -0.63
NPC2-207ENST00000555619 A6NN06 94 aa11.08□□□□□ -0.64
NPC2-207ENST00000555619 CRCT1Q9UGL9 99 aa11.07□□□□□ -0.64
NPC2-207ENST00000555619 SSPOA2VEC9 5147 aa11.06□□□□□ -0.64
NPC2-207ENST00000555619 MIR22HGQ0VDD5 57 aa11.04□□□□□ -0.64
NPC2-207ENST00000555619 A6NED7 52 aa11□□□□□ -0.65
NPC2-207ENST00000555619 KRTAP19-6Q3LI70 58 aa10.98□□□□□ -0.65
NPC2-207ENST00000555619 SPINT4Q6UDR6 99 aa10.97□□□□□ -0.65
NPC2-207ENST00000555619 KRTAP12-1P59990 96 aa10.96□□□□□ -0.65
NPC2-207ENST00000555619 KRTAP12-2P59991 146 aa10.91□□□□□ -0.66
NPC2-207ENST00000555619 KRTAP9-6A0A140TA67 174 aa10.87□□□□□ -0.67
NPC2-207ENST00000555619 KRTAP10-5P60370 271 aa10.84□□□□□ -0.67
NPC2-207ENST00000555619 MT1XP80297 61 aa10.81□□□□□ -0.68
NPC2-207ENST00000555619 CAMK2N1Q7Z7J9 78 aa10.81□□□□□ -0.68
NPC2-207ENST00000555619 PRO2289Q9P1D8 64 aa10.73□□□□□ -0.69
NPC2-207ENST00000555619 FCGBPQ9Y6R7 5405 aaPredicted RBP10.72□□□□□ -0.69
NPC2-207ENST00000555619 CDC42SE1Q9NRR8 79 aa10.69□□□□□ -0.7
NPC2-207ENST00000555619 K7ERS5 55 aa10.62□□□□□ -0.71
NPC2-207ENST00000555619 BRK1Q8WUW1 75 aa10.46□□□□□ -0.73
NPC2-207ENST00000555619 C10orf95Q9H7T3 257 aa10.42□□□□□ -0.74
NPC2-207ENST00000555619 KRTAP10-7P60409 375 aaPredicted RBP10.35□□□□□ -0.75
NPC2-207ENST00000555619 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.26□□□□□ -0.77
NPC2-207ENST00000555619 KRTAP10-12P60413 245 aa10.24□□□□□ -0.77
NPC2-207ENST00000555619 MACF1Q9UPN3 7388 aaKnown RBP10.21□□□□□ -0.77
NPC2-207ENST00000555619 TNP1P09430 55 aa10.17□□□□□ -0.78
NPC2-207ENST00000555619 ROMO1P60602 79 aa10.11□□□□□ -0.79
NPC2-207ENST00000555619 KRTAP4-8A0A0G2JLE6 195 aa10.1□□□□□ -0.79
NPC2-207ENST00000555619 KRTAP4-8Q9BYQ9 185 aa10.1□□□□□ -0.79
NPC2-207ENST00000555619 KRTAP25-1Q3LHN0 102 aa10.02□□□□□ -0.81
NPC2-207ENST00000555619 KMT2DO14686 5537 aa9.98□□□□□ -0.81
NPC2-207ENST00000555619 SYNE2Q8WXH0 6885 aaKnown RBP9.97□□□□□ -0.81
NPC2-207ENST00000555619 KRTAP8-1Q8IUC2 63 aa9.96□□□□□ -0.82
NPC2-207ENST00000555619 PRO0628Q9UI54 55 aa9.92□□□□□ -0.82
NPC2-207ENST00000555619 PMAIP1Q13794 54 aa9.88□□□□□ -0.83
NPC2-207ENST00000555619 KRTAP6-3Q3LI67 103 aa9.87□□□□□ -0.83
NPC2-207ENST00000555619 LCE3AQ5TA76 89 aa9.87□□□□□ -0.83
NPC2-207ENST00000555619 KRTAP9-7A8MTY7 169 aa9.86□□□□□ -0.83
NPC2-207ENST00000555619 KRTAP5-9P26371 169 aa9.74□□□□□ -0.85
NPC2-207ENST00000555619 SPRR2FQ96RM1 72 aa9.72□□□□□ -0.85
NPC2-207ENST00000555619 KRTAP19-5Q3LI72 72 aa9.67□□□□□ -0.86
NPC2-207ENST00000555619 KRTAP23-1A1A580 65 aa9.65□□□□□ -0.86
NPC2-207ENST00000555619 KRTAP19-7Q3SYF9 63 aa9.64□□□□□ -0.87
NPC2-207ENST00000555619 PP632Q6XCG6 107 aa9.52□□□□□ -0.89
NPC2-207ENST00000555619 MT1EP04732 61 aa9.51□□□□□ -0.89
NPC2-207ENST00000555619 KRTAP12-3P60328 96 aa9.48□□□□□ -0.89
NPC2-207ENST00000555619 MUC12Q9UKN1 5478 aa9.45□□□□□ -0.9
NPC2-207ENST00000555619 SPRR2EP22531 72 aa9.38□□□□□ -0.91
NPC2-207ENST00000555619 SPRR2BP35325 72 aa9.38□□□□□ -0.91
NPC2-207ENST00000555619 SPRR2AP35326 72 aa9.38□□□□□ -0.91
NPC2-207ENST00000555619 LCE1AQ5T7P2 110 aa9.36□□□□□ -0.91
NPC2-207ENST00000555619 PRAC1Q96KF2 57 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms