RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 A6NED7 52 aa5.44□□□□□ -1.54
SRP54-208ENST00000555557 A6NN06 94 aa5.44□□□□□ -1.54
SRP54-208ENST00000555557 LCA10Q71F78 164 aa5.43□□□□□ -1.54
SRP54-208ENST00000555557 CDC42SE1Q9NRR8 79 aa5.43□□□□□ -1.54
SRP54-208ENST00000555557 PCOTHQ58A44 107 aa5.41□□□□□ -1.54
SRP54-208ENST00000555557 C7orf65Q6ZTY9 151 aa5.4□□□□□ -1.54
SRP54-208ENST00000555557 COA5Q86WW8 74 aa5.4□□□□□ -1.55
SRP54-208ENST00000555557 LINC01558Q9Y6Z2 57 aa5.38□□□□□ -1.55
SRP54-208ENST00000555557 LCE2AQ5TA79 106 aaPredicted RBP5.38□□□□□ -1.55
SRP54-208ENST00000555557 IGKV2D-30A0A075B6S6 120 aa5.36□□□□□ -1.55
SRP54-208ENST00000555557 IGKV2-30P06310 120 aa5.36□□□□□ -1.55
SRP54-208ENST00000555557 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
SRP54-208ENST00000555557 SEC61BP60468 96 aaKnown RBP5.35□□□□□ -1.55
SRP54-208ENST00000555557 SPINK7P58062 85 aa5.33□□□□□ -1.56
SRP54-208ENST00000555557 MUC2Q02817 5179 aa5.32□□□□□ -1.56
SRP54-208ENST00000555557 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
SRP54-208ENST00000555557 HRES1P13985 223 aa5.25□□□□□ -1.57
SRP54-208ENST00000555557 LCE2CQ5TA81 110 aa5.24□□□□□ -1.57
SRP54-208ENST00000555557 LINC01554Q52M75 96 aa5.17□□□□□ -1.58
SRP54-208ENST00000555557 KRTAP3-1Q9BYR8 98 aa5.17□□□□□ -1.58
SRP54-208ENST00000555557 PRAC1Q96KF2 57 aa5.16□□□□□ -1.58
SRP54-208ENST00000555557 ACYP2P14621 99 aa5.15□□□□□ -1.58
SRP54-208ENST00000555557 COX6B2Q6YFQ2 88 aa5.15□□□□□ -1.58
SRP54-208ENST00000555557 FAT4Q6V0I7 4981 aa5.14□□□□□ -1.59
SRP54-208ENST00000555557 LORP23490 312 aaPredicted RBP5.13□□□□□ -1.59
SRP54-208ENST00000555557 SPATA8Q6RVD6 105 aa5.13□□□□□ -1.59
SRP54-208ENST00000555557 KRTAP19-2Q3LHN2 52 aa5.11□□□□□ -1.59
SRP54-208ENST00000555557 DMAC1Q96GE9 116 aa5.11□□□□□ -1.59
SRP54-208ENST00000555557 A0A1B0GU69 56 aa5.1□□□□□ -1.59
SRP54-208ENST00000555557 H3BS24 57 aa5.1□□□□□ -1.59
SRP54-208ENST00000555557 ADM2Q7Z4H4 148 aa5.09□□□□□ -1.59
SRP54-208ENST00000555557 MIR22HGQ0VDD5 57 aa5.07□□□□□ -1.6
SRP54-208ENST00000555557 H1FX-AS1Q4G0G2 97 aa5.07□□□□□ -1.6
SRP54-208ENST00000555557 UQCR11O14957 56 aa5.06□□□□□ -1.6
SRP54-208ENST00000555557 S4R3F8 94 aa5.01□□□□□ -1.61
SRP54-208ENST00000555557 CSAG1Q6PB30 78 aa5□□□□□ -1.61
SRP54-208ENST00000555557 FLGP20930 4061 aaPredicted RBP5□□□□□ -1.61
SRP54-208ENST00000555557 MT1HP80294 61 aa4.96□□□□□ -1.62
SRP54-208ENST00000555557 KRTAP9-2Q9BYQ4 174 aa4.94□□□□□ -1.62
SRP54-208ENST00000555557 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
SRP54-208ENST00000555557 KRTAP4-6Q9BYQ5 205 aa4.93□□□□□ -1.62
SRP54-208ENST00000555557 M0R2T5 61 aa4.91□□□□□ -1.62
SRP54-208ENST00000555557 KRTAP25-1Q3LHN0 102 aa4.86□□□□□ -1.63
SRP54-208ENST00000555557 ROMO1P60602 79 aa4.83□□□□□ -1.64
SRP54-208ENST00000555557 KRTAP10-6P60371 365 aaPredicted RBP4.79□□□□□ -1.64
SRP54-208ENST00000555557 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
SRP54-208ENST00000555557 H0YAA0 97 aa4.76□□□□□ -1.65
SRP54-208ENST00000555557 P0C880 135 aa4.76□□□□□ -1.65
SRP54-208ENST00000555557 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
SRP54-208ENST00000555557 A0A1B0GU33 70 aa4.74□□□□□ -1.65
SRP54-208ENST00000555557 K7ERS5 55 aa4.74□□□□□ -1.65
SRP54-208ENST00000555557 MT2AP02795 61 aa4.73□□□□□ -1.65
SRP54-208ENST00000555557 FSIP2Q5CZC0 6907 aa4.72□□□□□ -1.65
SRP54-208ENST00000555557 MT1FP04733 61 aa4.71□□□□□ -1.66
SRP54-208ENST00000555557 KRTAP10-10P60014 251 aa4.7□□□□□ -1.66
SRP54-208ENST00000555557 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
SRP54-208ENST00000555557 KRTAP13-4Q3LI77 160 aa4.63□□□□□ -1.67
SRP54-208ENST00000555557 R4GN34 69 aa4.62□□□□□ -1.67
SRP54-208ENST00000555557 M0QZ58 72 aa4.61□□□□□ -1.67
SRP54-208ENST00000555557 CRIPTQ9P021 101 aa4.6□□□□□ -1.67
SRP54-208ENST00000555557 SPINT4Q6UDR6 99 aa4.59□□□□□ -1.67
SRP54-208ENST00000555557 KRTAP9-3Q9BYQ3 159 aa4.58□□□□□ -1.68
SRP54-208ENST00000555557 KRTAP19-1Q8IUB9 90 aa4.58□□□□□ -1.68
SRP54-208ENST00000555557 SPRR2GQ9BYE4 73 aa4.55□□□□□ -1.68
SRP54-208ENST00000555557 A0A0D9SG42 100 aa4.54□□□□□ -1.68
SRP54-208ENST00000555557 USH2AO75445 5202 aa4.53□□□□□ -1.68
SRP54-208ENST00000555557 KRTAP4-8Q9BYQ9 185 aa4.52□□□□□ -1.69
SRP54-208ENST00000555557 SSPOA2VEC9 5147 aa4.5□□□□□ -1.69
SRP54-208ENST00000555557 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
SRP54-208ENST00000555557 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
SRP54-208ENST00000555557 KRTAP19-8Q3LI54 63 aa4.44□□□□□ -1.7
SRP54-208ENST00000555557 MT1BP07438 61 aa4.42□□□□□ -1.7
SRP54-208ENST00000555557 KRTAP12-2P59991 146 aa4.42□□□□□ -1.7
SRP54-208ENST00000555557 KRTAP12-1P59990 96 aa4.42□□□□□ -1.7
SRP54-208ENST00000555557 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.41□□□□□ -1.7
SRP54-208ENST00000555557 C10orf95Q9H7T3 257 aa4.4□□□□□ -1.71
SRP54-208ENST00000555557 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
SRP54-208ENST00000555557 PLAC4Q8WY50 150 aa4.38□□□□□ -1.71
SRP54-208ENST00000555557 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
SRP54-208ENST00000555557 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
SRP54-208ENST00000555557 LCE3BQ5TA77 95 aa4.31□□□□□ -1.72
SRP54-208ENST00000555557 CAMK2N1Q7Z7J9 78 aa4.31□□□□□ -1.72
SRP54-208ENST00000555557 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
SRP54-208ENST00000555557 MT1XP80297 61 aa4.25□□□□□ -1.73
SRP54-208ENST00000555557 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
SRP54-208ENST00000555557 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
SRP54-208ENST00000555557 SYNE2Q8WXH0 6885 aaKnown RBP4.22□□□□□ -1.73
SRP54-208ENST00000555557 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
SRP54-208ENST00000555557 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
SRP54-208ENST00000555557 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
SRP54-208ENST00000555557 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
SRP54-208ENST00000555557 PRO2289Q9P1D8 64 aa4.19□□□□□ -1.74
SRP54-208ENST00000555557 KRTAP4-8A0A0G2JLE6 195 aa4.15□□□□□ -1.74
SRP54-208ENST00000555557 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
SRP54-208ENST00000555557 KMT2DO14686 5537 aa4.07□□□□□ -1.76
SRP54-208ENST00000555557 TNP1P09430 55 aa4.07□□□□□ -1.76
SRP54-208ENST00000555557 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
SRP54-208ENST00000555557 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
SRP54-208ENST00000555557 KRTAP10-12P60413 245 aa4.01□□□□□ -1.77
SRP54-208ENST00000555557 KRTAP4-7Q9BYR0 210 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms