RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 KRTAP10-8P60410 259 aa5.48□□□□□ -1.53
PRKCH-211ENST00000555082 HERC2O95714 4834 aa5.48□□□□□ -1.53
PRKCH-211ENST00000555082 MT1HL1P0DM35 61 aa5.47□□□□□ -1.53
PRKCH-211ENST00000555082 H3BS24 57 aa5.41□□□□□ -1.54
PRKCH-211ENST00000555082 C9orf92A6NGG3 77 aa5.39□□□□□ -1.55
PRKCH-211ENST00000555082 RPS29P62273 56 aaKnown RBP5.39□□□□□ -1.55
PRKCH-211ENST00000555082 H0YAA0 97 aa5.37□□□□□ -1.55
PRKCH-211ENST00000555082 CRIPTQ9P021 101 aa5.36□□□□□ -1.55
PRKCH-211ENST00000555082 PCLOQ9Y6V0 5065 aa5.33□□□□□ -1.56
PRKCH-211ENST00000555082 J3QL48 77 aa5.32□□□□□ -1.56
PRKCH-211ENST00000555082 A8MUU9 505 aa5.31□□□□□ -1.56
PRKCH-211ENST00000555082 A0A1B0GU33 70 aa5.3□□□□□ -1.56
PRKCH-211ENST00000555082 KRTAP3-1Q9BYR8 98 aa5.28□□□□□ -1.56
PRKCH-211ENST00000555082 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
PRKCH-211ENST00000555082 LPAP08519 4548 aa5.27□□□□□ -1.57
PRKCH-211ENST00000555082 H1FX-AS1Q4G0G2 97 aa5.26□□□□□ -1.57
PRKCH-211ENST00000555082 HERC1Q15751 4861 aa5.25□□□□□ -1.57
PRKCH-211ENST00000555082 LRP2P98164 4655 aa5.21□□□□□ -1.57
PRKCH-211ENST00000555082 ROMO1P60602 79 aa5.2□□□□□ -1.58
PRKCH-211ENST00000555082 XP32Q5T750 250 aa5.2□□□□□ -1.58
PRKCH-211ENST00000555082 C20orf166-AS1Q96NR2 134 aa5.2□□□□□ -1.58
PRKCH-211ENST00000555082 COX6B2Q6YFQ2 88 aa5.18□□□□□ -1.58
PRKCH-211ENST00000555082 A0A0D9SG42 100 aa5.15□□□□□ -1.58
PRKCH-211ENST00000555082 K7ERS5 55 aa5.15□□□□□ -1.58
PRKCH-211ENST00000555082 TPRXLQ17RH7 258 aa5.13□□□□□ -1.59
PRKCH-211ENST00000555082 RPL37P61927 97 aaKnown RBP5.13□□□□□ -1.59
PRKCH-211ENST00000555082 P0C880 135 aa5.1□□□□□ -1.59
PRKCH-211ENST00000555082 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.59
PRKCH-211ENST00000555082 KRTAP13-4Q3LI77 160 aa5.09□□□□□ -1.6
PRKCH-211ENST00000555082 C10orf95Q9H7T3 257 aa5.07□□□□□ -1.6
PRKCH-211ENST00000555082 KRTAP10-6P60371 365 aaPredicted RBP5.05□□□□□ -1.6
PRKCH-211ENST00000555082 SPINT4Q6UDR6 99 aa5.05□□□□□ -1.6
PRKCH-211ENST00000555082 KRTAP3-3Q9BYR6 98 aa5.02□□□□□ -1.61
PRKCH-211ENST00000555082 MUC2Q02817 5179 aa5.01□□□□□ -1.61
PRKCH-211ENST00000555082 KRTAP4-1Q9BYQ7 146 aa5□□□□□ -1.61
PRKCH-211ENST00000555082 KRTAP3-2Q9BYR7 98 aa4.99□□□□□ -1.61
PRKCH-211ENST00000555082 UBR4Q5T4S7 5183 aa4.96□□□□□ -1.62
PRKCH-211ENST00000555082 SEC61BP60468 96 aaKnown RBP4.95□□□□□ -1.62
PRKCH-211ENST00000555082 S4R3F8 94 aa4.94□□□□□ -1.62
PRKCH-211ENST00000555082 KRTAP12-2P59991 146 aa4.93□□□□□ -1.62
PRKCH-211ENST00000555082 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
PRKCH-211ENST00000555082 MUC17Q685J3 4493 aa4.91□□□□□ -1.62
PRKCH-211ENST00000555082 RNF213Q63HN8 5207 aa4.9□□□□□ -1.63
PRKCH-211ENST00000555082 KRTAP15-1Q3LI76 137 aa4.86□□□□□ -1.63
PRKCH-211ENST00000555082 KRTAP12-1P59990 96 aa4.84□□□□□ -1.63
PRKCH-211ENST00000555082 LCE2DQ5TA82 110 aaPredicted RBP4.81□□□□□ -1.64
PRKCH-211ENST00000555082 FAT4Q6V0I7 4981 aa4.81□□□□□ -1.64
PRKCH-211ENST00000555082 KRTAP19-2Q3LHN2 52 aa4.79□□□□□ -1.64
PRKCH-211ENST00000555082 LCE2CQ5TA81 110 aa4.71□□□□□ -1.66
PRKCH-211ENST00000555082 M0QZ58 72 aa4.69□□□□□ -1.66
PRKCH-211ENST00000555082 FLGP20930 4061 aaPredicted RBP4.68□□□□□ -1.66
PRKCH-211ENST00000555082 R4GN34 69 aa4.62□□□□□ -1.67
PRKCH-211ENST00000555082 MT1HP80294 61 aa4.61□□□□□ -1.67
PRKCH-211ENST00000555082 LORP23490 312 aaPredicted RBP4.6□□□□□ -1.67
PRKCH-211ENST00000555082 M0R2T5 61 aa4.59□□□□□ -1.68
PRKCH-211ENST00000555082 PLAC4Q8WY50 150 aa4.58□□□□□ -1.68
PRKCH-211ENST00000555082 A0A0A0MQY5 61 aa4.48□□□□□ -1.69
PRKCH-211ENST00000555082 CAMK2N1Q7Z7J9 78 aa4.45□□□□□ -1.7
PRKCH-211ENST00000555082 LUZP6Q538Z0 58 aa4.43□□□□□ -1.7
PRKCH-211ENST00000555082 KRTAP9-8Q9BYQ0 159 aa4.43□□□□□ -1.7
PRKCH-211ENST00000555082 MT2AP02795 61 aa4.42□□□□□ -1.7
PRKCH-211ENST00000555082 MT1FP04733 61 aa4.42□□□□□ -1.7
PRKCH-211ENST00000555082 LCE2AQ5TA79 106 aaPredicted RBP4.42□□□□□ -1.7
PRKCH-211ENST00000555082 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
PRKCH-211ENST00000555082 PP632Q6XCG6 107 aa4.32□□□□□ -1.72
PRKCH-211ENST00000555082 KRTAP19-1Q8IUB9 90 aa4.31□□□□□ -1.72
PRKCH-211ENST00000555082 LCE2BO14633 110 aa4.28□□□□□ -1.72
PRKCH-211ENST00000555082 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
PRKCH-211ENST00000555082 SPRR2GQ9BYE4 73 aa4.25□□□□□ -1.73
PRKCH-211ENST00000555082 TNP1P09430 55 aa4.24□□□□□ -1.73
PRKCH-211ENST00000555082 USH2AO75445 5202 aa4.2□□□□□ -1.74
PRKCH-211ENST00000555082 MT1BP07438 61 aa4.16□□□□□ -1.74
PRKCH-211ENST00000555082 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
PRKCH-211ENST00000555082 KRTAP19-8Q3LI54 63 aa4.14□□□□□ -1.75
PRKCH-211ENST00000555082 SPRR5A0A1B0GTR4 108 aa4.12□□□□□ -1.75
PRKCH-211ENST00000555082 KRTAP23-1A1A580 65 aa4.05□□□□□ -1.76
PRKCH-211ENST00000555082 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
PRKCH-211ENST00000555082 SSPOA2VEC9 5147 aa4.02□□□□□ -1.77
PRKCH-211ENST00000555082 MT1XP80297 61 aa4.02□□□□□ -1.77
PRKCH-211ENST00000555082 KRTAP10-5P60370 271 aa4.01□□□□□ -1.77
PRKCH-211ENST00000555082 KRTAP9-2Q9BYQ4 174 aa3.91□□□□□ -1.78
PRKCH-211ENST00000555082 KRTAP10-7P60409 375 aaPredicted RBP3.9□□□□□ -1.79
PRKCH-211ENST00000555082 KMT2DO14686 5537 aa3.88□□□□□ -1.79
PRKCH-211ENST00000555082 PRO2289Q9P1D8 64 aa3.87□□□□□ -1.79
PRKCH-211ENST00000555082 KRTAP19-6Q3LI70 58 aa3.85□□□□□ -1.79
PRKCH-211ENST00000555082 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
PRKCH-211ENST00000555082 FCGBPQ9Y6R7 5405 aaPredicted RBP3.84□□□□□ -1.8
PRKCH-211ENST00000555082 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
PRKCH-211ENST00000555082 KRTAP4-8A0A0G2JLE6 195 aa3.8□□□□□ -1.8
PRKCH-211ENST00000555082 KRTAP4-8Q9BYQ9 185 aa3.8□□□□□ -1.8
PRKCH-211ENST00000555082 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
PRKCH-211ENST00000555082 INE1O15225 51 aa3.77□□□□□ -1.81
PRKCH-211ENST00000555082 CRCT1Q9UGL9 99 aa3.75□□□□□ -1.81
PRKCH-211ENST00000555082 MACF1Q9UPN3 7388 aaKnown RBP3.7□□□□□ -1.82
PRKCH-211ENST00000555082 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
PRKCH-211ENST00000555082 SYNE2Q8WXH0 6885 aaKnown RBP3.62□□□□□ -1.83
PRKCH-211ENST00000555082 KRTAP9-6A0A140TA67 174 aa3.59□□□□□ -1.84
PRKCH-211ENST00000555082 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
PRKCH-211ENST00000555082 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
PRKCH-211ENST00000555082 MUC12Q9UKN1 5478 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms