RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 NISCHQ9Y2I1 1504 aa21.92■■□□□ 1.1
PRKCH-211ENST00000555082 CCDC180Q9P1Z9 1646 aa18.96■□□□□ 0.63
PRKCH-211ENST00000555082 DCAF8L2P0C7V8 631 aa18.46■□□□□ 0.55
PRKCH-211ENST00000555082 ZCCHC6Q5VYS8 1495 aaKnown RBP18.38■□□□□ 0.53
PRKCH-211ENST00000555082 ABCC9O60706 1549 aa18.34■□□□□ 0.53
PRKCH-211ENST00000555082 SHROOM4Q9ULL8 1493 aa18.15■□□□□ 0.5
PRKCH-211ENST00000555082 DCAF1Q9Y4B6 1507 aa17.97■□□□□ 0.47
PRKCH-211ENST00000555082 NACADO15069 1562 aa17.75■□□□□ 0.43
PRKCH-211ENST00000555082 MYO15BQ96JP2 1530 aa17.75■□□□□ 0.43
PRKCH-211ENST00000555082 SCRIBQ14160 1630 aa17.68■□□□□ 0.42
PRKCH-211ENST00000555082 RB1CC1Q8TDY2 1594 aa17.64■□□□□ 0.41
PRKCH-211ENST00000555082 SUPT5HO00267 1087 aaKnown RBP17.41■□□□□ 0.38
PRKCH-211ENST00000555082 PABPN1Q86U42 306 aaKnown RBP eCLIP17.4■□□□□ 0.38
PRKCH-211ENST00000555082 UNC13AQ9UPW8 1703 aa17.29■□□□□ 0.36
PRKCH-211ENST00000555082 BICRAQ9NZM4 1560 aa17.2■□□□□ 0.34
PRKCH-211ENST00000555082 CECR2Q9BXF3 1484 aa17.19■□□□□ 0.34
PRKCH-211ENST00000555082 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
PRKCH-211ENST00000555082 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.31
PRKCH-211ENST00000555082 BAZ1AQ9NRL2 1556 aaPredicted RBP16.88■□□□□ 0.29
PRKCH-211ENST00000555082 WIZO95785 1651 aa16.85■□□□□ 0.29
PRKCH-211ENST00000555082 SMARCA4P51532 1647 aa16.84■□□□□ 0.29
PRKCH-211ENST00000555082 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
PRKCH-211ENST00000555082 ATAD2BQ9ULI0 1458 aa16.64■□□□□ 0.25
PRKCH-211ENST00000555082 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.25
PRKCH-211ENST00000555082 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
PRKCH-211ENST00000555082 BAZ1BQ9UIG0 1483 aaKnown RBP16.54■□□□□ 0.24
PRKCH-211ENST00000555082 SMARCA2P51531 1590 aa16.53■□□□□ 0.24
PRKCH-211ENST00000555082 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.24
PRKCH-211ENST00000555082 CCDC88BA6NC98 1476 aa16.52■□□□□ 0.23
PRKCH-211ENST00000555082 CC2D2AQ9P2K1 1620 aa16.47■□□□□ 0.23
PRKCH-211ENST00000555082 NCAPD3P42695 1498 aa16.46■□□□□ 0.23
PRKCH-211ENST00000555082 DNAJC5BQ9UF47 199 aa16.39■□□□□ 0.21
PRKCH-211ENST00000555082 HRCP23327 699 aa16.37■□□□□ 0.21
PRKCH-211ENST00000555082 HMGXB3Q12766 1538 aa16.36■□□□□ 0.21
PRKCH-211ENST00000555082 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
PRKCH-211ENST00000555082 PCGF6Q9BYE7 350 aa16.25■□□□□ 0.19
PRKCH-211ENST00000555082 PPARGC1BQ86YN6 1023 aaKnown RBP16.22■□□□□ 0.19
PRKCH-211ENST00000555082 ABCC8Q09428 1581 aa16.2■□□□□ 0.18
PRKCH-211ENST00000555082 FAM9AQ8IZU1 332 aaPredicted RBP16.13■□□□□ 0.17
PRKCH-211ENST00000555082 CADPSQ9ULU8 1353 aa16.1■□□□□ 0.17
PRKCH-211ENST00000555082 CFTRP13569 1480 aa16.09■□□□□ 0.17
PRKCH-211ENST00000555082 NESP48681 1621 aa16.09■□□□□ 0.17
PRKCH-211ENST00000555082 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
PRKCH-211ENST00000555082 EHMT2Q96KQ7 1210 aa16.03■□□□□ 0.16
PRKCH-211ENST00000555082 LOC105371045A0A1W2PR82 267 aa16.02■□□□□ 0.15
PRKCH-211ENST00000555082 SYNJ1O43426 1573 aa15.97■□□□□ 0.15
PRKCH-211ENST00000555082 FANCD2Q9BXW9 1451 aa15.92■□□□□ 0.14
PRKCH-211ENST00000555082 SOGA1O94964 1423 aa15.92■□□□□ 0.14
PRKCH-211ENST00000555082 CUX1P39880 1505 aa15.89■□□□□ 0.13
PRKCH-211ENST00000555082 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
PRKCH-211ENST00000555082 LAMC3Q9Y6N6 1575 aa15.85■□□□□ 0.13
PRKCH-211ENST00000555082 TOP2BQ02880 1626 aa15.82■□□□□ 0.12
PRKCH-211ENST00000555082 PRDM2Q13029 1718 aa15.81■□□□□ 0.12
PRKCH-211ENST00000555082 PDS5BQ9NTI5 1447 aa15.81■□□□□ 0.12
PRKCH-211ENST00000555082 CEP164Q9UPV0 1460 aa15.79■□□□□ 0.12
PRKCH-211ENST00000555082 BIVM-ERCC5R4GMW8 1640 aa15.76■□□□□ 0.11
PRKCH-211ENST00000555082 CSRNP3Q8WYN3 585 aa15.74■□□□□ 0.11
PRKCH-211ENST00000555082 URB2Q14146 1524 aaKnown RBP15.74■□□□□ 0.11
PRKCH-211ENST00000555082 KIF21AQ7Z4S6 1674 aa15.74■□□□□ 0.11
PRKCH-211ENST00000555082 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
PRKCH-211ENST00000555082 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
PRKCH-211ENST00000555082 RAD54L2Q9Y4B4 1467 aa15.7■□□□□ 0.1
PRKCH-211ENST00000555082 DNMBPQ6XZF7 1577 aa15.68■□□□□ 0.1
PRKCH-211ENST00000555082 ERCC6Q03468 1493 aa15.67■□□□□ 0.1
PRKCH-211ENST00000555082 POLA1P09884 1462 aaPredicted RBP15.67■□□□□ 0.1
PRKCH-211ENST00000555082 CUX2O14529 1486 aa15.65■□□□□ 0.1
PRKCH-211ENST00000555082 TRIM26Q12899 539 aaPredicted RBP15.64■□□□□ 0.09
PRKCH-211ENST00000555082 EEA1Q15075 1411 aa15.63■□□□□ 0.09
PRKCH-211ENST00000555082 UBTFP17480 764 aaKnown RBP15.61■□□□□ 0.09
PRKCH-211ENST00000555082 MRC2Q9UBG0 1479 aa15.61■□□□□ 0.09
PRKCH-211ENST00000555082 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
PRKCH-211ENST00000555082 TDRD9Q8NDG6 1382 aaKnown RBP15.59■□□□□ 0.09
PRKCH-211ENST00000555082 RANGAP1P46060 587 aaPredicted RBP15.56■□□□□ 0.08
PRKCH-211ENST00000555082 RAPGEF2Q9Y4G8 1499 aa15.55■□□□□ 0.08
PRKCH-211ENST00000555082 IGF1RP08069 1367 aa15.55■□□□□ 0.08
PRKCH-211ENST00000555082 ABCA10Q8WWZ4 1543 aa15.52■□□□□ 0.08
PRKCH-211ENST00000555082 GOLGA3Q08378 1498 aa15.51■□□□□ 0.07
PRKCH-211ENST00000555082 WDR62O43379 1518 aa15.49■□□□□ 0.07
PRKCH-211ENST00000555082 PRXQ9BXM0 1461 aa15.48■□□□□ 0.07
PRKCH-211ENST00000555082 AQRO60306 1485 aaKnown RBP eCLIP15.47■□□□□ 0.07
PRKCH-211ENST00000555082 THOC2Q8NI27 1593 aaKnown RBP15.47■□□□□ 0.07
PRKCH-211ENST00000555082 CARMIL1Q5VZK9 1371 aa15.46■□□□□ 0.06
PRKCH-211ENST00000555082 TNIKQ9UKE5 1360 aa15.46■□□□□ 0.06
PRKCH-211ENST00000555082 ZNF608Q9ULD9 1512 aaPredicted RBP15.46■□□□□ 0.06
PRKCH-211ENST00000555082 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
PRKCH-211ENST00000555082 KIF21BO75037 1637 aa15.45■□□□□ 0.06
PRKCH-211ENST00000555082 TARBP1Q13395 1621 aaKnown RBP15.44■□□□□ 0.06
PRKCH-211ENST00000555082 GAPVD1Q14C86 1478 aa15.43■□□□□ 0.06
PRKCH-211ENST00000555082 CEP162Q5TB80 1403 aa15.43■□□□□ 0.06
PRKCH-211ENST00000555082 WDR97A6NE52 1622 aa15.4■□□□□ 0.06
PRKCH-211ENST00000555082 IFT140Q96RY7 1462 aa15.39■□□□□ 0.05
PRKCH-211ENST00000555082 ZEB1P37275 1124 aaPredicted RBP15.38■□□□□ 0.05
PRKCH-211ENST00000555082 PELP1Q8IZL8 1130 aaKnown RBP15.38■□□□□ 0.05
PRKCH-211ENST00000555082 ABCA5Q8WWZ7 1642 aa15.37■□□□□ 0.05
PRKCH-211ENST00000555082 ERICH3Q5RHP9 1530 aa15.35■□□□□ 0.05
PRKCH-211ENST00000555082 CLIP1P30622 1438 aa15.32■□□□□ 0.04
PRKCH-211ENST00000555082 GRIN2BQ13224 1484 aa15.29■□□□□ 0.04
PRKCH-211ENST00000555082 TTBK1Q5TCY1 1321 aaPredicted RBP15.28■□□□□ 0.04
PRKCH-211ENST00000555082 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
PRKCH-211ENST00000555082 FBLN2P98095 1184 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms