RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 FN1P02751 2386 aaKnown RBP1.67□□□□□ -2.14
LRFN5-204ENST00000554171 SETD2Q9BYW2 2564 aaPredicted RBP1.67□□□□□ -2.14
LRFN5-204ENST00000554171 FLNBO75369 2602 aaKnown RBP1.66□□□□□ -2.14
LRFN5-204ENST00000554171 KRTAP1-4P0C5Y4 121 aa1.66□□□□□ -2.14
LRFN5-204ENST00000554171 ABCA2Q9BZC7 2435 aa1.66□□□□□ -2.14
LRFN5-204ENST00000554171 LCE1AQ5T7P2 110 aa1.66□□□□□ -2.14
LRFN5-204ENST00000554171 NAV2Q8IVL1 2488 aa1.66□□□□□ -2.14
LRFN5-204ENST00000554171 J3QKU1 62 aa1.66□□□□□ -2.14
LRFN5-204ENST00000554171 DEFB124Q8NES8 71 aa1.66□□□□□ -2.14
LRFN5-204ENST00000554171 NOTCH3Q9UM47 2321 aa1.66□□□□□ -2.14
LRFN5-204ENST00000554171 HIVEP3Q5T1R4 2406 aa1.65□□□□□ -2.15
LRFN5-204ENST00000554171 KRTAP1-5Q9BYS1 174 aa1.65□□□□□ -2.15
LRFN5-204ENST00000554171 MYO9AB2RTY4 2548 aa1.65□□□□□ -2.15
LRFN5-204ENST00000554171 USMG5Q96IX5 58 aa1.65□□□□□ -2.15
LRFN5-204ENST00000554171 TLN1Q9Y490 2541 aaKnown RBP1.64□□□□□ -2.15
LRFN5-204ENST00000554171 BRD3OSQ6XYD6 125 aa1.64□□□□□ -2.15
LRFN5-204ENST00000554171 SPTBN2O15020 2390 aa1.64□□□□□ -2.15
LRFN5-204ENST00000554171 LCE1FQ5T754 118 aa1.64□□□□□ -2.15
LRFN5-204ENST00000554171 DEFB108BQ8NET1 73 aa1.63□□□□□ -2.15
LRFN5-204ENST00000554171 APC2O95996 2303 aa1.63□□□□□ -2.15
LRFN5-204ENST00000554171 LPAP08519 4548 aa1.63□□□□□ -2.15
LRFN5-204ENST00000554171 KNL1Q8NG31 2342 aa1.62□□□□□ -2.15
LRFN5-204ENST00000554171 COL6A5A8TX70 2615 aa1.62□□□□□ -2.15
LRFN5-204ENST00000554171 LRRK2Q5S007 2527 aa1.62□□□□□ -2.15
LRFN5-204ENST00000554171 NBEAL2Q6ZNJ1 2754 aa1.61□□□□□ -2.15
LRFN5-204ENST00000554171 FLNAP21333 2647 aaKnown RBP1.61□□□□□ -2.15
LRFN5-204ENST00000554171 DEFB136Q30KP8 78 aa1.6□□□□□ -2.15
LRFN5-204ENST00000554171 Q5VSD8 79 aa1.6□□□□□ -2.15
LRFN5-204ENST00000554171 CREBBPQ92793 2442 aa1.59□□□□□ -2.15
LRFN5-204ENST00000554171 UBR4Q5T4S7 5183 aa1.59□□□□□ -2.15
LRFN5-204ENST00000554171 PTPRZ1P23471 2315 aaPredicted RBP1.59□□□□□ -2.15
LRFN5-204ENST00000554171 LCE1EQ5T753 118 aa1.58□□□□□ -2.16
LRFN5-204ENST00000554171 UBE2DNLQ8IWF7 75 aa1.58□□□□□ -2.16
LRFN5-204ENST00000554171 H3BUX3 64 aa1.57□□□□□ -2.16
LRFN5-204ENST00000554171 NOP10Q9NPE3 64 aaKnown RBP1.57□□□□□ -2.16
LRFN5-204ENST00000554171 TPRP12270 2363 aaKnown RBP1.56□□□□□ -2.16
LRFN5-204ENST00000554171 FAT4Q6V0I7 4981 aa1.55□□□□□ -2.16
LRFN5-204ENST00000554171 PRLHP81277 87 aa1.55□□□□□ -2.16
LRFN5-204ENST00000554171 ACACAQ13085 2346 aa1.55□□□□□ -2.16
LRFN5-204ENST00000554171 MGAM2Q2M2H8 2515 aa1.54□□□□□ -2.16
LRFN5-204ENST00000554171 AKAP6Q13023 2319 aa1.54□□□□□ -2.16
LRFN5-204ENST00000554171 ANKHD1Q8IWZ3 2542 aaKnown RBP1.54□□□□□ -2.16
LRFN5-204ENST00000554171 F8P00451 2351 aa1.54□□□□□ -2.16
LRFN5-204ENST00000554171 KRTAP10-12P60413 245 aa1.53□□□□□ -2.16
LRFN5-204ENST00000554171 STAB1Q9NY15 2570 aa1.53□□□□□ -2.16
LRFN5-204ENST00000554171 PKDREJQ9NTG1 2253 aa1.53□□□□□ -2.16
LRFN5-204ENST00000554171 HTN1P15515 57 aa1.53□□□□□ -2.16
LRFN5-204ENST00000554171 POLQO75417 2590 aa1.52□□□□□ -2.17
LRFN5-204ENST00000554171 SPG11Q96JI7 2443 aa1.52□□□□□ -2.17
LRFN5-204ENST00000554171 HMCN1Q96RW7 5635 aa1.52□□□□□ -2.17
LRFN5-204ENST00000554171 ATRQ13535 2644 aa1.52□□□□□ -2.17
LRFN5-204ENST00000554171 KRTAP2-3P0C7H8 128 aa1.51□□□□□ -2.17
LRFN5-204ENST00000554171 KRTAP2-4Q9BYR9 128 aa1.51□□□□□ -2.17
LRFN5-204ENST00000554171 KRTAP2-1Q9BYU5 128 aa1.51□□□□□ -2.17
LRFN5-204ENST00000554171 SMR3AQ99954 134 aa1.5□□□□□ -2.17
LRFN5-204ENST00000554171 PRO0255Q9UI72 69 aa1.5□□□□□ -2.17
LRFN5-204ENST00000554171 MUC2Q02817 5179 aa1.5□□□□□ -2.17
LRFN5-204ENST00000554171 SPINK1P00995 79 aa1.5□□□□□ -2.17
LRFN5-204ENST00000554171 A0A096LPF7 62 aa1.49□□□□□ -2.17
LRFN5-204ENST00000554171 DEFB133Q30KQ1 61 aa1.49□□□□□ -2.17
LRFN5-204ENST00000554171 APLNQ9ULZ1 77 aa1.49□□□□□ -2.17
LRFN5-204ENST00000554171 TENM3Q9P273 2699 aa1.49□□□□□ -2.17
LRFN5-204ENST00000554171 SPTAN1Q13813 2472 aaKnown RBP1.49□□□□□ -2.17
LRFN5-204ENST00000554171 RNF213Q63HN8 5207 aa1.49□□□□□ -2.17
LRFN5-204ENST00000554171 RP1L1Q8IWN7 2480 aaPredicted RBP1.48□□□□□ -2.17
LRFN5-204ENST00000554171 CSPG4Q6UVK1 2322 aa1.47□□□□□ -2.17
LRFN5-204ENST00000554171 KRTAP12-4P60329 112 aa1.47□□□□□ -2.17
LRFN5-204ENST00000554171 KRTAP9-8Q9BYQ0 159 aa1.47□□□□□ -2.17
LRFN5-204ENST00000554171 CCDC168Q8NDH2 2452 aa1.47□□□□□ -2.17
LRFN5-204ENST00000554171 C2CD3Q4AC94 2353 aa1.47□□□□□ -2.17
LRFN5-204ENST00000554171 A0A0D9SG42 100 aa1.47□□□□□ -2.17
LRFN5-204ENST00000554171 KRTAP5-3Q6L8H2 238 aa1.47□□□□□ -2.17
LRFN5-204ENST00000554171 ACANP16112 2415 aa1.46□□□□□ -2.18
LRFN5-204ENST00000554171 HIVEP2P31629 2446 aa1.46□□□□□ -2.18
LRFN5-204ENST00000554171 JMJD1CQ15652 2540 aa1.44□□□□□ -2.18
LRFN5-204ENST00000554171 SPTA1P02549 2419 aa1.43□□□□□ -2.18
LRFN5-204ENST00000554171 A0A096LNI7 61 aa1.43□□□□□ -2.18
LRFN5-204ENST00000554171 H3BNG1 76 aa1.43□□□□□ -2.18
LRFN5-204ENST00000554171 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
LRFN5-204ENST00000554171 MTORP42345 2549 aa1.43□□□□□ -2.18
LRFN5-204ENST00000554171 LINC01556Q5JQF7 62 aa1.42□□□□□ -2.18
LRFN5-204ENST00000554171 M0QZ58 72 aa1.42□□□□□ -2.18
LRFN5-204ENST00000554171 KRTAP10-7P60409 375 aaPredicted RBP1.4□□□□□ -2.19
LRFN5-204ENST00000554171 KRTAP10-5P60370 271 aa1.4□□□□□ -2.19
LRFN5-204ENST00000554171 ROS1P08922 2347 aa1.39□□□□□ -2.19
LRFN5-204ENST00000554171 NBASA2RRP1 2371 aa1.37□□□□□ -2.19
LRFN5-204ENST00000554171 KRTAP10-4P60372 401 aaPredicted RBP1.34□□□□□ -2.19
LRFN5-204ENST00000554171 STAB2Q8WWQ8 2551 aa1.34□□□□□ -2.2
LRFN5-204ENST00000554171 KRTAP9-6A8MVA2 160 aa1.34□□□□□ -2.2
LRFN5-204ENST00000554171 NOTCH1P46531 2555 aa1.33□□□□□ -2.2
LRFN5-204ENST00000554171 USH2AO75445 5202 aa1.32□□□□□ -2.2
LRFN5-204ENST00000554171 SSPOA2VEC9 5147 aa1.32□□□□□ -2.2
LRFN5-204ENST00000554171 GPR98Q8WXG9 6306 aa1.32□□□□□ -2.2
LRFN5-204ENST00000554171 LCE3CQ5T5A8 94 aa1.32□□□□□ -2.2
LRFN5-204ENST00000554171 SONP18583 2426 aaKnown RBP1.31□□□□□ -2.2
LRFN5-204ENST00000554171 KRTAP8-1Q8IUC2 63 aa1.31□□□□□ -2.2
LRFN5-204ENST00000554171 TLN2Q9Y4G6 2542 aa1.3□□□□□ -2.2
LRFN5-204ENST00000554171 KRTAP5-5Q701N2 237 aaPredicted RBP1.3□□□□□ -2.2
LRFN5-204ENST00000554171 SPINK6Q6UWN8 80 aa1.29□□□□□ -2.2
LRFN5-204ENST00000554171 RPS29P62273 56 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms