RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 AEBP2Q6ZN18 517 aaPredicted RBP7.81□□□□□ -1.16
LRFN5-204ENST00000554171 SLC24A1O60721 1099 aa7.76□□□□□ -1.17
LRFN5-204ENST00000554171 APLP2Q06481 763 aa7.56□□□□□ -1.2
LRFN5-204ENST00000554171 PRKCSHP14314 528 aaPredicted RBP7.49□□□□□ -1.21
LRFN5-204ENST00000554171 CHIC1Q5VXU3 224 aa7.44□□□□□ -1.22
LRFN5-204ENST00000554171 TTBK1Q5TCY1 1321 aaPredicted RBP7.38□□□□□ -1.23
LRFN5-204ENST00000554171 PELP1Q8IZL8 1130 aaKnown RBP7.34□□□□□ -1.23
LRFN5-204ENST00000554171 DAXXQ9UER7 740 aaPredicted RBP7.33□□□□□ -1.24
LRFN5-204ENST00000554171 MYT1Q01538 1121 aa7.31□□□□□ -1.24
LRFN5-204ENST00000554171 NCBP3Q53F19 620 aaKnown RBP6.98□□□□□ -1.29
LRFN5-204ENST00000554171 ERICH6Q7L0X2 663 aa6.95□□□□□ -1.3
LRFN5-204ENST00000554171 FAM9AQ8IZU1 332 aaPredicted RBP6.81□□□□□ -1.32
LRFN5-204ENST00000554171 BCL11AQ9H165 835 aa6.79□□□□□ -1.32
LRFN5-204ENST00000554171 PLPPR3Q6T4P5 718 aa6.78□□□□□ -1.32
LRFN5-204ENST00000554171 PHF23Q9BUL5 403 aaPredicted RBP6.76□□□□□ -1.33
LRFN5-204ENST00000554171 ARXQ96QS3 562 aa6.76□□□□□ -1.33
LRFN5-204ENST00000554171 RTN4Q9NQC3 1192 aaKnown RBP6.71□□□□□ -1.33
LRFN5-204ENST00000554171 PLEKHG5O94827 1062 aa6.68□□□□□ -1.34
LRFN5-204ENST00000554171 TIMELESSQ9UNS1 1208 aa6.66□□□□□ -1.34
LRFN5-204ENST00000554171 EIF5BO60841 1220 aaKnown RBP6.64□□□□□ -1.35
LRFN5-204ENST00000554171 KLHL34Q8N239 644 aa6.62□□□□□ -1.35
LRFN5-204ENST00000554171 HRCP23327 699 aa6.53□□□□□ -1.36
LRFN5-204ENST00000554171 UBE2Q2Q8WVN8 375 aa6.53□□□□□ -1.36
LRFN5-204ENST00000554171 SCAF1Q9H7N4 1312 aaKnown RBP6.52□□□□□ -1.37
LRFN5-204ENST00000554171 AMER1Q5JTC6 1135 aaPredicted RBP6.42□□□□□ -1.38
LRFN5-204ENST00000554171 KCNA4P22459 653 aa6.36□□□□□ -1.39
LRFN5-204ENST00000554171 EHMT2Q96KQ7 1210 aa6.35□□□□□ -1.39
LRFN5-204ENST00000554171 HOMEZQ8IX15 550 aa6.33□□□□□ -1.4
LRFN5-204ENST00000554171 TAOK2Q9UL54 1235 aa6.32□□□□□ -1.4
LRFN5-204ENST00000554171 LOC105371045A0A1W2PR82 267 aa6.31□□□□□ -1.4
LRFN5-204ENST00000554171 TULP1O00294 542 aaPredicted RBP6.31□□□□□ -1.4
LRFN5-204ENST00000554171 PODXL2Q9NZ53 605 aa6.31□□□□□ -1.4
LRFN5-204ENST00000554171 SENP3Q9H4L4 574 aaPredicted RBP6.28□□□□□ -1.4
LRFN5-204ENST00000554171 PDIA4P13667 645 aaKnown RBP6.24□□□□□ -1.41
LRFN5-204ENST00000554171 SAMD1Q6SPF0 538 aaPredicted RBP6.22□□□□□ -1.41
LRFN5-204ENST00000554171 ANO8Q9HCE9 1232 aaPredicted RBP6.22□□□□□ -1.41
LRFN5-204ENST00000554171 CSRNP3Q8WYN3 585 aa6.22□□□□□ -1.41
LRFN5-204ENST00000554171 FGD1P98174 961 aa6.17□□□□□ -1.42
LRFN5-204ENST00000554171 PKNOX2Q96KN3 472 aa6.16□□□□□ -1.42
LRFN5-204ENST00000554171 RANGAP1P46060 587 aaPredicted RBP6.16□□□□□ -1.42
LRFN5-204ENST00000554171 PPP6R1Q9UPN7 881 aa6.15□□□□□ -1.42
LRFN5-204ENST00000554171 CNKSR2Q8WXI2 1034 aa6.13□□□□□ -1.43
LRFN5-204ENST00000554171 ANP32EQ9BTT0 268 aa6.12□□□□□ -1.43
LRFN5-204ENST00000554171 NPM2Q86SE8 214 aaKnown RBP6.12□□□□□ -1.43
LRFN5-204ENST00000554171 FBXO3Q9UK99 471 aa6.11□□□□□ -1.43
LRFN5-204ENST00000554171 GTF3C3Q9Y5Q9 886 aa6.11□□□□□ -1.43
LRFN5-204ENST00000554171 CHMP4AQ9BY43 222 aa6.11□□□□□ -1.43
LRFN5-204ENST00000554171 RSPH4AQ5TD94 716 aa6.1□□□□□ -1.43
LRFN5-204ENST00000554171 PDE4CQ08493 712 aa6.09□□□□□ -1.43
LRFN5-204ENST00000554171 RSPH6AQ9H0K4 717 aa6.09□□□□□ -1.43
LRFN5-204ENST00000554171 TRIM26Q12899 539 aaPredicted RBP6.08□□□□□ -1.44
LRFN5-204ENST00000554171 TMEM132AQ24JP5 1023 aa6.08□□□□□ -1.44
LRFN5-204ENST00000554171 BCL11BQ9C0K0 894 aaPredicted RBP6.06□□□□□ -1.44
LRFN5-204ENST00000554171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.06□□□□□ -1.44
LRFN5-204ENST00000554171 TAF7LQ5H9L4 462 aa6.06□□□□□ -1.44
LRFN5-204ENST00000554171 AAMPQ13685 434 aa6.05□□□□□ -1.44
LRFN5-204ENST00000554171 FOXD1Q16676 465 aa6.04□□□□□ -1.44
LRFN5-204ENST00000554171 TPRNQ4KMQ1 711 aa6.03□□□□□ -1.44
LRFN5-204ENST00000554171 CENPBP07199 599 aaPredicted RBP6.02□□□□□ -1.45
LRFN5-204ENST00000554171 BCANQ96GW7 911 aa6.02□□□□□ -1.45
LRFN5-204ENST00000554171 SALL2Q9Y467 1007 aaPredicted RBP6□□□□□ -1.45
LRFN5-204ENST00000554171 CHRM1P11229 460 aaPredicted RBP6□□□□□ -1.45
LRFN5-204ENST00000554171 BRD2P25440 801 aaKnown RBP5.99□□□□□ -1.45
LRFN5-204ENST00000554171 DHX37Q8IY37 1157 aaKnown RBP5.99□□□□□ -1.45
LRFN5-204ENST00000554171 IGSF3O75054 1194 aa5.97□□□□□ -1.45
LRFN5-204ENST00000554171 PLCB2Q00722 1185 aa5.97□□□□□ -1.45
LRFN5-204ENST00000554171 C14orf37Q86TY3 774 aa5.94□□□□□ -1.46
LRFN5-204ENST00000554171 ACIN1Q9UKV3 1341 aaKnown RBP5.93□□□□□ -1.46
LRFN5-204ENST00000554171 ADRA2BP18089 450 aa5.93□□□□□ -1.46
LRFN5-204ENST00000554171 PPARGC1BQ86YN6 1023 aaKnown RBP5.93□□□□□ -1.46
LRFN5-204ENST00000554171 NEFLP07196 543 aa5.93□□□□□ -1.46
LRFN5-204ENST00000554171 UBTFP17480 764 aaKnown RBP5.91□□□□□ -1.46
LRFN5-204ENST00000554171 ERICH6BQ5W0A0 696 aa5.9□□□□□ -1.47
LRFN5-204ENST00000554171 NEUROD1Q13562 356 aa5.87□□□□□ -1.47
LRFN5-204ENST00000554171 DCAF1Q9Y4B6 1507 aa5.87□□□□□ -1.47
LRFN5-204ENST00000554171 RBM10P98175 930 aaKnown RBP5.85□□□□□ -1.47
LRFN5-204ENST00000554171 MYO15BQ96JP2 1530 aa5.85□□□□□ -1.47
LRFN5-204ENST00000554171 BCCIPQ9P287 314 aaKnown RBP eCLIP5.84□□□□□ -1.47
LRFN5-204ENST00000554171 KDM2AQ9Y2K7 1162 aa5.84□□□□□ -1.47
LRFN5-204ENST00000554171 RNF216Q9NWF9 866 aaPredicted RBP5.82□□□□□ -1.48
LRFN5-204ENST00000554171 PUS7Q96PZ0 661 aaKnown RBP5.82□□□□□ -1.48
LRFN5-204ENST00000554171 HAP1P54257 671 aaPredicted RBP5.81□□□□□ -1.48
LRFN5-204ENST00000554171 SHROOM4Q9ULL8 1493 aa5.8□□□□□ -1.48
LRFN5-204ENST00000554171 CCDC136Q96JN2 1154 aa5.79□□□□□ -1.48
LRFN5-204ENST00000554171 CDK11AQ9UQ88 783 aaPredicted RBP5.79□□□□□ -1.48
LRFN5-204ENST00000554171 ZMYND15Q9H091 742 aa5.79□□□□□ -1.48
LRFN5-204ENST00000554171 KCNG1Q9UIX4 513 aa5.78□□□□□ -1.48
LRFN5-204ENST00000554171 HSP90B1P14625 803 aaKnown RBP5.78□□□□□ -1.48
LRFN5-204ENST00000554171 PAXIP1Q6ZW49 1069 aaPredicted RBP5.78□□□□□ -1.48
LRFN5-204ENST00000554171 TMED8Q6PL24 325 aaPredicted RBP5.74□□□□□ -1.49
LRFN5-204ENST00000554171 VSIG10Q8N0Z9 540 aa5.74□□□□□ -1.49
LRFN5-204ENST00000554171 BRPF3Q9ULD4 1205 aa5.74□□□□□ -1.49
LRFN5-204ENST00000554171 TSHZ2Q9NRE2 1034 aa5.73□□□□□ -1.49
LRFN5-204ENST00000554171 PRDM4Q9UKN5 801 aa5.73□□□□□ -1.49
LRFN5-204ENST00000554171 TEX2Q8IWB9 1127 aa5.72□□□□□ -1.49
LRFN5-204ENST00000554171 ZNF692Q9BU19 519 aaPredicted RBP5.72□□□□□ -1.49
LRFN5-204ENST00000554171 CCDC180Q9P1Z9 1646 aa5.72□□□□□ -1.49
LRFN5-204ENST00000554171 GTF2E1P29083 439 aaPredicted RBP5.71□□□□□ -1.5
LRFN5-204ENST00000554171 GRIPAP1Q4V328 841 aa5.71□□□□□ -1.5
LRFN5-204ENST00000554171 TICAM2Q86XR7 235 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms