RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 A0A1B0GU33 70 aa5□□□□□ -1.61
AL049839.2-201ENST00000553947 NDUFAF8A1L188 74 aa4.99□□□□□ -1.61
AL049839.2-201ENST00000553947 A0A0A0MQY5 61 aa4.99□□□□□ -1.61
AL049839.2-201ENST00000553947 PKHD1L1Q86WI1 4243 aa4.97□□□□□ -1.61
AL049839.2-201ENST00000553947 DMBT1Q9UGM3 2413 aaPredicted RBP4.95□□□□□ -1.62
AL049839.2-201ENST00000553947 RPS29P62273 56 aaKnown RBP4.93□□□□□ -1.62
AL049839.2-201ENST00000553947 RYR3Q15413 4870 aa4.93□□□□□ -1.62
AL049839.2-201ENST00000553947 C20orf166-AS1Q96NR2 134 aa4.92□□□□□ -1.62
AL049839.2-201ENST00000553947 H1FX-AS1Q4G0G2 97 aa4.91□□□□□ -1.62
AL049839.2-201ENST00000553947 LRP1Q07954 4544 aaKnown RBP4.9□□□□□ -1.63
AL049839.2-201ENST00000553947 LORP23490 312 aaPredicted RBP4.89□□□□□ -1.63
AL049839.2-201ENST00000553947 C9orf92A6NGG3 77 aa4.89□□□□□ -1.63
AL049839.2-201ENST00000553947 HSPG2P98160 4391 aa4.87□□□□□ -1.63
AL049839.2-201ENST00000553947 FAT3Q8TDW7 4589 aa4.85□□□□□ -1.63
AL049839.2-201ENST00000553947 TNXBP22105 4242 aa4.84□□□□□ -1.63
AL049839.2-201ENST00000553947 RYR1P21817 5038 aa4.84□□□□□ -1.63
AL049839.2-201ENST00000553947 KRTAP17-1Q9BYP8 105 aa4.83□□□□□ -1.64
AL049839.2-201ENST00000553947 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
AL049839.2-201ENST00000553947 TPRXLQ17RH7 258 aa4.81□□□□□ -1.64
AL049839.2-201ENST00000553947 A0A0D9SG42 100 aa4.81□□□□□ -1.64
AL049839.2-201ENST00000553947 Q5VSD8 79 aa4.81□□□□□ -1.64
AL049839.2-201ENST00000553947 COX6B2Q6YFQ2 88 aa4.8□□□□□ -1.64
AL049839.2-201ENST00000553947 KIAA1109Q2LD37 5005 aa4.79□□□□□ -1.64
AL049839.2-201ENST00000553947 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
AL049839.2-201ENST00000553947 KRTAP10-8P60410 259 aa4.78□□□□□ -1.64
AL049839.2-201ENST00000553947 RPL37P61927 97 aaKnown RBP4.78□□□□□ -1.64
AL049839.2-201ENST00000553947 MYCBP2O75592 4640 aa4.74□□□□□ -1.65
AL049839.2-201ENST00000553947 EPPK1P58107 5090 aaKnown RBP4.74□□□□□ -1.65
AL049839.2-201ENST00000553947 KRTAP3-1Q9BYR8 98 aa4.74□□□□□ -1.65
AL049839.2-201ENST00000553947 LUZP6Q538Z0 58 aa4.73□□□□□ -1.65
AL049839.2-201ENST00000553947 MT1HL1P0DM35 61 aa4.68□□□□□ -1.66
AL049839.2-201ENST00000553947 XP32Q5T750 250 aa4.65□□□□□ -1.66
AL049839.2-201ENST00000553947 KRTAP13-4Q3LI77 160 aa4.62□□□□□ -1.67
AL049839.2-201ENST00000553947 LPAP08519 4548 aa4.61□□□□□ -1.67
AL049839.2-201ENST00000553947 KRTAP4-5Q9BYR2 181 aa4.59□□□□□ -1.67
AL049839.2-201ENST00000553947 S4R3F8 94 aa4.59□□□□□ -1.67
AL049839.2-201ENST00000553947 LRP2P98164 4655 aa4.59□□□□□ -1.68
AL049839.2-201ENST00000553947 ABCA13Q86UQ4 5058 aa4.59□□□□□ -1.68
AL049839.2-201ENST00000553947 KRTAP10-6P60371 365 aaPredicted RBP4.57□□□□□ -1.68
AL049839.2-201ENST00000553947 KRTAP12-2P59991 146 aa4.53□□□□□ -1.68
AL049839.2-201ENST00000553947 PLAC4Q8WY50 150 aa4.47□□□□□ -1.69
AL049839.2-201ENST00000553947 HERC2O95714 4834 aa4.45□□□□□ -1.7
AL049839.2-201ENST00000553947 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
AL049839.2-201ENST00000553947 BIRC6Q9NR09 4857 aa4.44□□□□□ -1.7
AL049839.2-201ENST00000553947 MUC17Q685J3 4493 aa4.38□□□□□ -1.71
AL049839.2-201ENST00000553947 SEC61BP60468 96 aaKnown RBP4.37□□□□□ -1.71
AL049839.2-201ENST00000553947 KRTAP4-1Q9BYQ7 146 aa4.35□□□□□ -1.71
AL049839.2-201ENST00000553947 M0QZ58 72 aa4.3□□□□□ -1.72
AL049839.2-201ENST00000553947 MUC2Q02817 5179 aa4.26□□□□□ -1.73
AL049839.2-201ENST00000553947 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
AL049839.2-201ENST00000553947 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
AL049839.2-201ENST00000553947 HERC1Q15751 4861 aa4.25□□□□□ -1.73
AL049839.2-201ENST00000553947 KRTAP19-2Q3LHN2 52 aa4.25□□□□□ -1.73
AL049839.2-201ENST00000553947 PCLOQ9Y6V0 5065 aa4.24□□□□□ -1.73
AL049839.2-201ENST00000553947 R4GN34 69 aa4.21□□□□□ -1.74
AL049839.2-201ENST00000553947 HMCN2Q8NDA2 5059 aa4.2□□□□□ -1.74
AL049839.2-201ENST00000553947 CAMK2N1Q7Z7J9 78 aa4.15□□□□□ -1.75
AL049839.2-201ENST00000553947 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
AL049839.2-201ENST00000553947 FLGP20930 4061 aaPredicted RBP4.11□□□□□ -1.75
AL049839.2-201ENST00000553947 FAT4Q6V0I7 4981 aa4.08□□□□□ -1.76
AL049839.2-201ENST00000553947 PRO2289Q9P1D8 64 aa4.04□□□□□ -1.76
AL049839.2-201ENST00000553947 UBR4Q5T4S7 5183 aa4.02□□□□□ -1.77
AL049839.2-201ENST00000553947 RNF213Q63HN8 5207 aa4.01□□□□□ -1.77
AL049839.2-201ENST00000553947 KRTAP4-8Q9BYQ9 185 aa3.98□□□□□ -1.77
AL049839.2-201ENST00000553947 TNP1P09430 55 aa3.92□□□□□ -1.78
AL049839.2-201ENST00000553947 MT1HP80294 61 aa3.92□□□□□ -1.78
AL049839.2-201ENST00000553947 KRTAP9-2Q9BYQ4 174 aa3.92□□□□□ -1.78
AL049839.2-201ENST00000553947 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.91□□□□□ -1.78
AL049839.2-201ENST00000553947 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.78
AL049839.2-201ENST00000553947 KRTAP9-6A0A140TA67 174 aa3.89□□□□□ -1.79
AL049839.2-201ENST00000553947 M0R2T5 61 aa3.89□□□□□ -1.79
AL049839.2-201ENST00000553947 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
AL049839.2-201ENST00000553947 INE1O15225 51 aa3.88□□□□□ -1.79
AL049839.2-201ENST00000553947 KRTAP19-1Q8IUB9 90 aa3.88□□□□□ -1.79
AL049839.2-201ENST00000553947 SPRR2GQ9BYE4 73 aa3.85□□□□□ -1.79
AL049839.2-201ENST00000553947 MT2AP02795 61 aa3.84□□□□□ -1.8
AL049839.2-201ENST00000553947 MT1FP04733 61 aa3.84□□□□□ -1.8
AL049839.2-201ENST00000553947 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
AL049839.2-201ENST00000553947 KRTAP10-10P60014 251 aa3.8□□□□□ -1.8
AL049839.2-201ENST00000553947 LCE3BQ5TA77 95 aa3.8□□□□□ -1.8
AL049839.2-201ENST00000553947 KRTAP23-1A1A580 65 aa3.79□□□□□ -1.8
AL049839.2-201ENST00000553947 KRTAP19-4Q3LI73 84 aa3.75□□□□□ -1.81
AL049839.2-201ENST00000553947 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
AL049839.2-201ENST00000553947 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
AL049839.2-201ENST00000553947 KRTAP19-8Q3LI54 63 aa3.7□□□□□ -1.82
AL049839.2-201ENST00000553947 MT1BP07438 61 aa3.68□□□□□ -1.82
AL049839.2-201ENST00000553947 KRTAP9-3Q9BYQ3 159 aa3.67□□□□□ -1.82
AL049839.2-201ENST00000553947 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
AL049839.2-201ENST00000553947 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
AL049839.2-201ENST00000553947 MT1XP80297 61 aa3.62□□□□□ -1.83
AL049839.2-201ENST00000553947 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
AL049839.2-201ENST00000553947 KRTAP4-8A0A0G2JLE6 195 aa3.62□□□□□ -1.83
AL049839.2-201ENST00000553947 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.83
AL049839.2-201ENST00000553947 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
AL049839.2-201ENST00000553947 USH2AO75445 5202 aa3.53□□□□□ -1.84
AL049839.2-201ENST00000553947 KRTAP10-7P60409 375 aaPredicted RBP3.52□□□□□ -1.85
AL049839.2-201ENST00000553947 KRTAP8-1Q8IUC2 63 aa3.5□□□□□ -1.85
AL049839.2-201ENST00000553947 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
AL049839.2-201ENST00000553947 KRTAP4-7Q9BYR0 210 aa3.47□□□□□ -1.85
AL049839.2-201ENST00000553947 KRTAP12-3P60328 96 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms