RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 SPTSSBQ8NFR3 76 aa9.93□□□□□ -0.82
LRP1-204ENST00000553277 RPL37P61927 97 aaKnown RBP9.87□□□□□ -0.83
LRP1-204ENST00000553277 A6NN06 94 aa9.87□□□□□ -0.83
LRP1-204ENST00000553277 SPATA8Q6RVD6 105 aa9.86□□□□□ -0.83
LRP1-204ENST00000553277 LPAP08519 4548 aa9.85□□□□□ -0.83
LRP1-204ENST00000553277 UQCR11O14957 56 aa9.83□□□□□ -0.84
LRP1-204ENST00000553277 LRP2P98164 4655 aa9.82□□□□□ -0.84
LRP1-204ENST00000553277 HMCN2Q8NDA2 5059 aa9.8□□□□□ -0.84
LRP1-204ENST00000553277 KRTAP3-1Q9BYR8 98 aa9.8□□□□□ -0.84
LRP1-204ENST00000553277 SEC61GP60059 68 aa9.78□□□□□ -0.84
LRP1-204ENST00000553277 KTN1-AS1Q86SY8 53 aa9.77□□□□□ -0.84
LRP1-204ENST00000553277 MIR22HGQ0VDD5 57 aa9.76□□□□□ -0.85
LRP1-204ENST00000553277 COX6B2Q6YFQ2 88 aa9.75□□□□□ -0.85
LRP1-204ENST00000553277 SEC61BP60468 96 aaKnown RBP9.69□□□□□ -0.86
LRP1-204ENST00000553277 MUC17Q685J3 4493 aa9.56□□□□□ -0.88
LRP1-204ENST00000553277 A0A1B0GU33 70 aa9.51□□□□□ -0.89
LRP1-204ENST00000553277 H1FX-AS1Q4G0G2 97 aa9.5□□□□□ -0.89
LRP1-204ENST00000553277 KRTAP4-1Q9BYQ7 146 aa9.5□□□□□ -0.89
LRP1-204ENST00000553277 H0YAA0 97 aa9.46□□□□□ -0.89
LRP1-204ENST00000553277 KRTAP3-3Q9BYR6 98 aa9.42□□□□□ -0.9
LRP1-204ENST00000553277 RBM12B-AS1Q9P1G2 102 aa9.39□□□□□ -0.91
LRP1-204ENST00000553277 S4R3F8 94 aa9.38□□□□□ -0.91
LRP1-204ENST00000553277 UBR4Q5T4S7 5183 aa9.36□□□□□ -0.91
LRP1-204ENST00000553277 MUC2Q02817 5179 aa9.32□□□□□ -0.92
LRP1-204ENST00000553277 KRTAP10-6P60371 365 aaPredicted RBP9.29□□□□□ -0.92
LRP1-204ENST00000553277 KRTAP19-2Q3LHN2 52 aa9.29□□□□□ -0.92
LRP1-204ENST00000553277 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
LRP1-204ENST00000553277 K7ERS5 55 aa9.23□□□□□ -0.93
LRP1-204ENST00000553277 RNF213Q63HN8 5207 aa9.22□□□□□ -0.93
LRP1-204ENST00000553277 PRAC1Q96KF2 57 aa9.22□□□□□ -0.93
LRP1-204ENST00000553277 ADM2Q7Z4H4 148 aa9.21□□□□□ -0.93
LRP1-204ENST00000553277 LCE2CQ5TA81 110 aa9.13□□□□□ -0.95
LRP1-204ENST00000553277 CSAG1Q6PB30 78 aa9.11□□□□□ -0.95
LRP1-204ENST00000553277 FLGP20930 4061 aaPredicted RBP9.08□□□□□ -0.96
LRP1-204ENST00000553277 KRTAP13-4Q3LI77 160 aa9.07□□□□□ -0.96
LRP1-204ENST00000553277 P0C880 135 aa9.06□□□□□ -0.96
LRP1-204ENST00000553277 LINC01554Q52M75 96 aa9□□□□□ -0.97
LRP1-204ENST00000553277 M0QZ58 72 aa8.97□□□□□ -0.97
LRP1-204ENST00000553277 FAT4Q6V0I7 4981 aa8.95□□□□□ -0.98
LRP1-204ENST00000553277 ROMO1P60602 79 aa8.94□□□□□ -0.98
LRP1-204ENST00000553277 KRTAP25-1Q3LHN0 102 aa8.94□□□□□ -0.98
LRP1-204ENST00000553277 A0A0D9SG42 100 aa8.92□□□□□ -0.98
LRP1-204ENST00000553277 MT1HP80294 61 aa8.91□□□□□ -0.98
LRP1-204ENST00000553277 KRTAP12-1P59990 96 aa8.8□□□□□ -1
LRP1-204ENST00000553277 KRTAP12-2P59991 146 aa8.78□□□□□ -1
LRP1-204ENST00000553277 LCE2AQ5TA79 106 aaPredicted RBP8.78□□□□□ -1
LRP1-204ENST00000553277 M0R2T5 61 aa8.72□□□□□ -1.01
LRP1-204ENST00000553277 SPINT4Q6UDR6 99 aa8.69□□□□□ -1.02
LRP1-204ENST00000553277 R4GN34 69 aa8.65□□□□□ -1.02
LRP1-204ENST00000553277 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
LRP1-204ENST00000553277 KRTAP9-8Q9BYQ0 159 aa8.59□□□□□ -1.03
LRP1-204ENST00000553277 CRIPTQ9P021 101 aa8.59□□□□□ -1.03
LRP1-204ENST00000553277 MT2AP02795 61 aa8.52□□□□□ -1.05
LRP1-204ENST00000553277 MT1FP04733 61 aa8.45□□□□□ -1.06
LRP1-204ENST00000553277 C10orf95Q9H7T3 257 aa8.41□□□□□ -1.06
LRP1-204ENST00000553277 KRTAP10-10P60014 251 aa8.4□□□□□ -1.07
LRP1-204ENST00000553277 SPRR2GQ9BYE4 73 aa8.3□□□□□ -1.08
LRP1-204ENST00000553277 KRTAP9-3Q9BYQ3 159 aa8.3□□□□□ -1.08
LRP1-204ENST00000553277 KRTAP19-1Q8IUB9 90 aa8.27□□□□□ -1.08
LRP1-204ENST00000553277 CAMK2N1Q7Z7J9 78 aa8.18□□□□□ -1.1
LRP1-204ENST00000553277 KRTAP19-8Q3LI54 63 aa8.11□□□□□ -1.11
LRP1-204ENST00000553277 PP632Q6XCG6 107 aa8.11□□□□□ -1.11
LRP1-204ENST00000553277 KRTAP15-1Q3LI76 137 aa8.09□□□□□ -1.11
LRP1-204ENST00000553277 LCE2BO14633 110 aa8.07□□□□□ -1.12
LRP1-204ENST00000553277 LCE2DQ5TA82 110 aaPredicted RBP8.05□□□□□ -1.12
LRP1-204ENST00000553277 KRTAP23-1A1A580 65 aa7.99□□□□□ -1.13
LRP1-204ENST00000553277 MT1BP07438 61 aa7.98□□□□□ -1.13
LRP1-204ENST00000553277 TNP1P09430 55 aa7.93□□□□□ -1.14
LRP1-204ENST00000553277 PLAC4Q8WY50 150 aa7.91□□□□□ -1.14
LRP1-204ENST00000553277 USH2AO75445 5202 aa7.83□□□□□ -1.16
LRP1-204ENST00000553277 H3BS24 57 aa7.78□□□□□ -1.16
LRP1-204ENST00000553277 KRTAP9-2Q9BYQ4 174 aa7.77□□□□□ -1.17
LRP1-204ENST00000553277 NDUFAF8A1L188 74 aa7.68□□□□□ -1.18
LRP1-204ENST00000553277 MT1XP80297 61 aa7.68□□□□□ -1.18
LRP1-204ENST00000553277 KRTAP19-6Q3LI70 58 aa7.67□□□□□ -1.18
LRP1-204ENST00000553277 KRTAP10-5P60370 271 aa7.66□□□□□ -1.18
LRP1-204ENST00000553277 SSPOA2VEC9 5147 aa7.6□□□□□ -1.19
LRP1-204ENST00000553277 FSIP2Q5CZC0 6907 aa7.6□□□□□ -1.19
LRP1-204ENST00000553277 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
LRP1-204ENST00000553277 CRCT1Q9UGL9 99 aa7.47□□□□□ -1.21
LRP1-204ENST00000553277 SPRR5A0A1B0GTR4 108 aa7.45□□□□□ -1.22
LRP1-204ENST00000553277 LUZP6Q538Z0 58 aa7.44□□□□□ -1.22
LRP1-204ENST00000553277 LCE3AQ5TA76 89 aa7.44□□□□□ -1.22
LRP1-204ENST00000553277 KRTAP8-1Q8IUC2 63 aa7.4□□□□□ -1.23
LRP1-204ENST00000553277 FCGBPQ9Y6R7 5405 aaPredicted RBP7.36□□□□□ -1.23
LRP1-204ENST00000553277 KRTAP10-7P60409 375 aaPredicted RBP7.32□□□□□ -1.24
LRP1-204ENST00000553277 KRTAP10-12P60413 245 aa7.32□□□□□ -1.24
LRP1-204ENST00000553277 KRTAP9-6A0A140TA67 174 aa7.24□□□□□ -1.25
LRP1-204ENST00000553277 KRTAP12-3P60328 96 aa7.16□□□□□ -1.26
LRP1-204ENST00000553277 KRTAP4-8A0A0G2JLE6 195 aa7.07□□□□□ -1.28
LRP1-204ENST00000553277 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
LRP1-204ENST00000553277 KMT2DO14686 5537 aa7□□□□□ -1.29
LRP1-204ENST00000553277 MACF1Q9UPN3 7388 aaKnown RBP6.96□□□□□ -1.3
LRP1-204ENST00000553277 A0A0A0MQY5 61 aa6.95□□□□□ -1.3
LRP1-204ENST00000553277 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.93□□□□□ -1.3
LRP1-204ENST00000553277 KRTAP19-5Q3LI72 72 aa6.87□□□□□ -1.31
LRP1-204ENST00000553277 KRTAP19-7Q3SYF9 63 aa6.87□□□□□ -1.31
LRP1-204ENST00000553277 KRTAP5-9P26371 169 aa6.81□□□□□ -1.32
LRP1-204ENST00000553277 KRTAP19-4Q3LI73 84 aa6.77□□□□□ -1.32
LRP1-204ENST00000553277 KRTAP6-3Q3LI67 103 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms