RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 ACYP2P14621 99 aa8.26□□□□□ -1.09
ITGA5-213ENST00000553071 KRTAP9-8Q9BYQ0 159 aa8.21□□□□□ -1.1
ITGA5-213ENST00000553071 KRTAP3-3Q9BYR6 98 aa8.17□□□□□ -1.1
ITGA5-213ENST00000553071 MT2AP02795 61 aa8.13□□□□□ -1.11
ITGA5-213ENST00000553071 H7BZZ5 65 aa8.12□□□□□ -1.11
ITGA5-213ENST00000553071 KRTAP10-10P60014 251 aa8.12□□□□□ -1.11
ITGA5-213ENST00000553071 SPTSSBQ8NFR3 76 aa8.12□□□□□ -1.11
ITGA5-213ENST00000553071 CHKB-CPT1BH3BT56 60 aa8.1□□□□□ -1.11
ITGA5-213ENST00000553071 CCDC179H3BU77 68 aa8.09□□□□□ -1.11
ITGA5-213ENST00000553071 LCE2DQ5TA82 110 aaPredicted RBP8.09□□□□□ -1.11
ITGA5-213ENST00000553071 H0YAA0 97 aa8.05□□□□□ -1.12
ITGA5-213ENST00000553071 MT1FP04733 61 aa8.05□□□□□ -1.12
ITGA5-213ENST00000553071 CYSTM1Q9H1C7 97 aa8.04□□□□□ -1.12
ITGA5-213ENST00000553071 KRTAP9-2Q9BYQ4 174 aa7.99□□□□□ -1.13
ITGA5-213ENST00000553071 ATP5EP56381 51 aaPredicted RBP7.98□□□□□ -1.13
ITGA5-213ENST00000553071 COA5Q86WW8 74 aa7.96□□□□□ -1.14
ITGA5-213ENST00000553071 KRTAP9-3Q9BYQ3 159 aa7.94□□□□□ -1.14
ITGA5-213ENST00000553071 CRIPTQ9P021 101 aa7.93□□□□□ -1.14
ITGA5-213ENST00000553071 TMEM258P61165 79 aa7.91□□□□□ -1.14
ITGA5-213ENST00000553071 ADM2Q7Z4H4 148 aa7.91□□□□□ -1.14
ITGA5-213ENST00000553071 SPRR2GQ9BYE4 73 aa7.78□□□□□ -1.16
ITGA5-213ENST00000553071 SEC61GP60059 68 aa7.77□□□□□ -1.17
ITGA5-213ENST00000553071 LCE2BO14633 110 aa7.76□□□□□ -1.17
ITGA5-213ENST00000553071 PCP4P48539 62 aa7.76□□□□□ -1.17
ITGA5-213ENST00000553071 KRTAP3-2Q9BYR7 98 aa7.76□□□□□ -1.17
ITGA5-213ENST00000553071 P0C880 135 aa7.75□□□□□ -1.17
ITGA5-213ENST00000553071 KRTAP19-1Q8IUB9 90 aa7.75□□□□□ -1.17
ITGA5-213ENST00000553071 R4GN34 69 aa7.73□□□□□ -1.17
ITGA5-213ENST00000553071 SERP1Q9Y6X1 66 aa7.72□□□□□ -1.17
ITGA5-213ENST00000553071 KRTAP9-6A0A140TA67 174 aa7.68□□□□□ -1.18
ITGA5-213ENST00000553071 CRCT1Q9UGL9 99 aa7.66□□□□□ -1.18
ITGA5-213ENST00000553071 M0QZ58 72 aa7.65□□□□□ -1.18
ITGA5-213ENST00000553071 Q5VV11 94 aa7.65□□□□□ -1.18
ITGA5-213ENST00000553071 KRTAP19-8Q3LI54 63 aa7.64□□□□□ -1.19
ITGA5-213ENST00000553071 USH2AO75445 5202 aa7.63□□□□□ -1.19
ITGA5-213ENST00000553071 FSIP2Q5CZC0 6907 aa7.63□□□□□ -1.19
ITGA5-213ENST00000553071 A0A1B0GU69 56 aa7.6□□□□□ -1.19
ITGA5-213ENST00000553071 PRR15LQ9BU68 103 aa7.57□□□□□ -1.2
ITGA5-213ENST00000553071 A0A1B0GU33 70 aa7.52□□□□□ -1.21
ITGA5-213ENST00000553071 LINC01558Q9Y6Z2 57 aa7.52□□□□□ -1.21
ITGA5-213ENST00000553071 MT1BP07438 61 aa7.51□□□□□ -1.21
ITGA5-213ENST00000553071 LINC01554Q52M75 96 aa7.5□□□□□ -1.21
ITGA5-213ENST00000553071 PLAC4Q8WY50 150 aa7.5□□□□□ -1.21
ITGA5-213ENST00000553071 KRTAP19-6Q3LI70 58 aa7.48□□□□□ -1.21
ITGA5-213ENST00000553071 V9GYY9 64 aa7.47□□□□□ -1.21
ITGA5-213ENST00000553071 RPS28P62857 69 aaKnown RBP7.45□□□□□ -1.22
ITGA5-213ENST00000553071 SSPOA2VEC9 5147 aa7.44□□□□□ -1.22
ITGA5-213ENST00000553071 A6NN06 94 aa7.43□□□□□ -1.22
ITGA5-213ENST00000553071 SMIM26A0A096LP01 95 aa7.41□□□□□ -1.22
ITGA5-213ENST00000553071 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
ITGA5-213ENST00000553071 Q1T7F1 81 aa7.36□□□□□ -1.23
ITGA5-213ENST00000553071 SPATA8Q6RVD6 105 aa7.34□□□□□ -1.23
ITGA5-213ENST00000553071 PRO2289Q9P1D8 64 aa7.33□□□□□ -1.24
ITGA5-213ENST00000553071 UQCR11O14957 56 aa7.3□□□□□ -1.24
ITGA5-213ENST00000553071 KRTAP10-5P60370 271 aa7.3□□□□□ -1.24
ITGA5-213ENST00000553071 FCGBPQ9Y6R7 5405 aaPredicted RBP7.28□□□□□ -1.24
ITGA5-213ENST00000553071 A0A0D9SG42 100 aa7.27□□□□□ -1.25
ITGA5-213ENST00000553071 PSPHP1O15172 72 aa7.22□□□□□ -1.25
ITGA5-213ENST00000553071 CAMK2N1Q7Z7J9 78 aa7.19□□□□□ -1.26
ITGA5-213ENST00000553071 SPINT4Q6UDR6 99 aa7.18□□□□□ -1.26
ITGA5-213ENST00000553071 MT1XP80297 61 aa7.17□□□□□ -1.26
ITGA5-213ENST00000553071 A8MU10 97 aa7.14□□□□□ -1.27
ITGA5-213ENST00000553071 MIR22HGQ0VDD5 57 aa7.14□□□□□ -1.27
ITGA5-213ENST00000553071 KRTAP12-1P59990 96 aa7.13□□□□□ -1.27
ITGA5-213ENST00000553071 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
ITGA5-213ENST00000553071 KRTAP12-2P59991 146 aa7.07□□□□□ -1.28
ITGA5-213ENST00000553071 A6NED7 52 aa7.05□□□□□ -1.28
ITGA5-213ENST00000553071 K7ERS5 55 aa7.02□□□□□ -1.29
ITGA5-213ENST00000553071 MACF1Q9UPN3 7388 aaKnown RBP6.94□□□□□ -1.3
ITGA5-213ENST00000553071 KRTAP9-7A8MTY7 169 aa6.88□□□□□ -1.31
ITGA5-213ENST00000553071 KRTAP10-12P60413 245 aa6.85□□□□□ -1.31
ITGA5-213ENST00000553071 CDC42SE1Q9NRR8 79 aa6.85□□□□□ -1.31
ITGA5-213ENST00000553071 KRTAP10-7P60409 375 aaPredicted RBP6.83□□□□□ -1.32
ITGA5-213ENST00000553071 KRTAP6-3Q3LI67 103 aa6.83□□□□□ -1.32
ITGA5-213ENST00000553071 SYNE2Q8WXH0 6885 aaKnown RBP6.78□□□□□ -1.32
ITGA5-213ENST00000553071 TNP1P09430 55 aa6.77□□□□□ -1.33
ITGA5-213ENST00000553071 C10orf95Q9H7T3 257 aa6.76□□□□□ -1.33
ITGA5-213ENST00000553071 KRTAP8-1Q8IUC2 63 aa6.74□□□□□ -1.33
ITGA5-213ENST00000553071 KRTAP5-9P26371 169 aa6.69□□□□□ -1.34
ITGA5-213ENST00000553071 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
ITGA5-213ENST00000553071 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
ITGA5-213ENST00000553071 KMT2DO14686 5537 aa6.64□□□□□ -1.35
ITGA5-213ENST00000553071 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
ITGA5-213ENST00000553071 SPRR2FQ96RM1 72 aa6.59□□□□□ -1.35
ITGA5-213ENST00000553071 BRK1Q8WUW1 75 aa6.57□□□□□ -1.36
ITGA5-213ENST00000553071 ROMO1P60602 79 aa6.54□□□□□ -1.36
ITGA5-213ENST00000553071 LCE3AQ5TA76 89 aa6.45□□□□□ -1.38
ITGA5-213ENST00000553071 KRTAP23-1A1A580 65 aa6.44□□□□□ -1.38
ITGA5-213ENST00000553071 MUC12Q9UKN1 5478 aa6.43□□□□□ -1.38
ITGA5-213ENST00000553071 KRTAP19-7Q3SYF9 63 aa6.4□□□□□ -1.38
ITGA5-213ENST00000553071 SPRR2EP22531 72 aa6.38□□□□□ -1.39
ITGA5-213ENST00000553071 SPRR2BP35325 72 aa6.38□□□□□ -1.39
ITGA5-213ENST00000553071 SPRR2AP35326 72 aa6.38□□□□□ -1.39
ITGA5-213ENST00000553071 MDN1Q9NU22 5596 aa6.37□□□□□ -1.39
ITGA5-213ENST00000553071 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
ITGA5-213ENST00000553071 NEBP20929 6669 aa6.35□□□□□ -1.39
ITGA5-213ENST00000553071 LCE1AQ5T7P2 110 aa6.35□□□□□ -1.39
ITGA5-213ENST00000553071 MT1EP04732 61 aa6.34□□□□□ -1.39
ITGA5-213ENST00000553071 PP632Q6XCG6 107 aa6.32□□□□□ -1.4
ITGA5-213ENST00000553071 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms