RNA–Protein interactions for RNA: ENST00000552810.5

CEP290-207, Transcript of centrosomal protein 290, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEP290, Length 7,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-207ENST00000552810 MT3P25713 68 aa3.06□□□□□ -1.92
CEP290-207ENST00000552810 SPRR2GQ9BYE4 73 aa3.05□□□□□ -1.92
CEP290-207ENST00000552810 SPRR2EP22531 72 aa3.04□□□□□ -1.92
CEP290-207ENST00000552810 SPRR2BP35325 72 aa3.04□□□□□ -1.92
CEP290-207ENST00000552810 SPRR2AP35326 72 aa3.04□□□□□ -1.92
CEP290-207ENST00000552810 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
CEP290-207ENST00000552810 MT1HL1P0DM35 61 aa3.03□□□□□ -1.92
CEP290-207ENST00000552810 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
CEP290-207ENST00000552810 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
CEP290-207ENST00000552810 CSMD2Q7Z408 3487 aa2.97□□□□□ -1.93
CEP290-207ENST00000552810 FBN2P35556 2912 aa2.97□□□□□ -1.93
CEP290-207ENST00000552810 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
CEP290-207ENST00000552810 ANK3Q12955 4377 aaKnown RBP2.97□□□□□ -1.93
CEP290-207ENST00000552810 CSMD3Q7Z407 3707 aa2.97□□□□□ -1.93
CEP290-207ENST00000552810 AKAP9Q99996 3911 aa2.96□□□□□ -1.94
CEP290-207ENST00000552810 HUWE1Q7Z6Z7 4374 aaKnown RBP2.95□□□□□ -1.94
CEP290-207ENST00000552810 KRTAP4-1Q9BYQ7 146 aa2.95□□□□□ -1.94
CEP290-207ENST00000552810 SPRR2DP22532 72 aa2.93□□□□□ -1.94
CEP290-207ENST00000552810 MT1GP13640 62 aa2.93□□□□□ -1.94
CEP290-207ENST00000552810 VPS13CQ709C8 3753 aa2.92□□□□□ -1.94
CEP290-207ENST00000552810 DNAH1Q9P2D7 4330 aa2.91□□□□□ -1.94
CEP290-207ENST00000552810 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
CEP290-207ENST00000552810 KRTAP19-4Q3LI73 84 aa2.87□□□□□ -1.95
CEP290-207ENST00000552810 LCE2BO14633 110 aa2.86□□□□□ -1.95
CEP290-207ENST00000552810 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
CEP290-207ENST00000552810 LCE2CQ5TA81 110 aa2.85□□□□□ -1.95
CEP290-207ENST00000552810 DNAH8Q96JB1 4490 aa2.83□□□□□ -1.96
CEP290-207ENST00000552810 MT1HP80294 61 aa2.82□□□□□ -1.96
CEP290-207ENST00000552810 KRTAP4-7Q9BYR0 210 aa2.81□□□□□ -1.96
CEP290-207ENST00000552810 DNHD1Q96M86 4753 aa2.8□□□□□ -1.96
CEP290-207ENST00000552810 MT1FP04733 61 aa2.79□□□□□ -1.96
CEP290-207ENST00000552810 LCE2DQ5TA82 110 aaPredicted RBP2.79□□□□□ -1.96
CEP290-207ENST00000552810 FAT1Q14517 4588 aa2.77□□□□□ -1.97
CEP290-207ENST00000552810 KRTAP4-8A0A0G2JLE6 195 aa2.77□□□□□ -1.97
CEP290-207ENST00000552810 KRTAP4-8Q9BYQ9 185 aa2.77□□□□□ -1.97
CEP290-207ENST00000552810 MT2AP02795 61 aa2.77□□□□□ -1.97
CEP290-207ENST00000552810 MT4P47944 62 aa2.76□□□□□ -1.97
CEP290-207ENST00000552810 LCE1DQ5T752 114 aa2.76□□□□□ -1.97
CEP290-207ENST00000552810 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
CEP290-207ENST00000552810 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
CEP290-207ENST00000552810 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
CEP290-207ENST00000552810 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
CEP290-207ENST00000552810 DNAH10Q8IVF4 4471 aa2.74□□□□□ -1.97
CEP290-207ENST00000552810 ZNF469Q96JG9 3925 aaPredicted RBP2.73□□□□□ -1.97
CEP290-207ENST00000552810 DNAH17Q9UFH2 4485 aa2.73□□□□□ -1.97
CEP290-207ENST00000552810 LCE5AQ5TCM9 118 aa2.71□□□□□ -1.98
CEP290-207ENST00000552810 DNAH5Q8TE73 4624 aa2.69□□□□□ -1.98
CEP290-207ENST00000552810 DNAH9Q9NYC9 4486 aa2.68□□□□□ -1.98
CEP290-207ENST00000552810 DNAH2Q9P225 4427 aa2.68□□□□□ -1.98
CEP290-207ENST00000552810 PRM1P04553 51 aa2.68□□□□□ -1.98
CEP290-207ENST00000552810 HYDINQ4G0P3 5121 aa2.68□□□□□ -1.98
CEP290-207ENST00000552810 LOC100996750A0A140TA64 210 aa2.67□□□□□ -1.98
CEP290-207ENST00000552810 SACSQ9NZJ4 4579 aa2.66□□□□□ -1.98
CEP290-207ENST00000552810 LYSTQ99698 3801 aa2.64□□□□□ -1.99
CEP290-207ENST00000552810 TRRAPQ9Y4A5 3859 aa2.64□□□□□ -1.99
CEP290-207ENST00000552810 DNAH11Q96DT5 4516 aa2.64□□□□□ -1.99
CEP290-207ENST00000552810 ALMS1Q8TCU4 4167 aa2.63□□□□□ -1.99
CEP290-207ENST00000552810 KRTAP4-9Q9BYQ8 210 aa2.63□□□□□ -1.99
CEP290-207ENST00000552810 KRTAP19-8Q3LI54 63 aa2.61□□□□□ -1.99
CEP290-207ENST00000552810 RYR3Q15413 4870 aa2.61□□□□□ -1.99
CEP290-207ENST00000552810 RYR2Q92736 4967 aa2.6□□□□□ -1.99
CEP290-207ENST00000552810 PLECQ15149 4684 aaKnown RBP2.6□□□□□ -1.99
CEP290-207ENST00000552810 APOBP04114 4563 aaKnown RBP2.6□□□□□ -1.99
CEP290-207ENST00000552810 DYNC2H1Q8NCM8 4307 aaKnown RBP2.59□□□□□ -1.99
CEP290-207ENST00000552810 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
CEP290-207ENST00000552810 DNAH3Q8TD57 4116 aa2.59□□□□□ -2
CEP290-207ENST00000552810 RYR1P21817 5038 aa2.59□□□□□ -2
CEP290-207ENST00000552810 LRP1BQ9NZR2 4599 aa2.57□□□□□ -2
CEP290-207ENST00000552810 MYCBP2O75592 4640 aa2.56□□□□□ -2
CEP290-207ENST00000552810 VPS13DQ5THJ4 4388 aa2.54□□□□□ -2
CEP290-207ENST00000552810 ANK2Q01484 3957 aa2.54□□□□□ -2
CEP290-207ENST00000552810 DYNC1H1Q14204 4646 aaKnown RBP2.54□□□□□ -2
CEP290-207ENST00000552810 LCE2AQ5TA79 106 aaPredicted RBP2.53□□□□□ -2
CEP290-207ENST00000552810 STARD9Q9P2P6 4700 aa2.5□□□□□ -2.01
CEP290-207ENST00000552810 MT1XP80297 61 aa2.5□□□□□ -2.01
CEP290-207ENST00000552810 FRAS1Q86XX4 4008 aa2.49□□□□□ -2.01
CEP290-207ENST00000552810 LPAP08519 4548 aa2.49□□□□□ -2.01
CEP290-207ENST00000552810 CMYA5Q8N3K9 4069 aa2.49□□□□□ -2.01
CEP290-207ENST00000552810 ABCA13Q86UQ4 5058 aa2.48□□□□□ -2.01
CEP290-207ENST00000552810 EPPK1P58107 5090 aaKnown RBP2.46□□□□□ -2.02
CEP290-207ENST00000552810 KRTAP17-1Q9BYP8 105 aa2.45□□□□□ -2.02
CEP290-207ENST00000552810 FAT3Q8TDW7 4589 aa2.45□□□□□ -2.02
CEP290-207ENST00000552810 FAT2Q9NYQ8 4349 aa2.44□□□□□ -2.02
CEP290-207ENST00000552810 KMT2CQ8NEZ4 4911 aaKnown RBP2.44□□□□□ -2.02
CEP290-207ENST00000552810 PRKDCP78527 4128 aaKnown RBP2.42□□□□□ -2.02
CEP290-207ENST00000552810 PCLOQ9Y6V0 5065 aa2.4□□□□□ -2.03
CEP290-207ENST00000552810 PKD1P98161 4303 aa2.4□□□□□ -2.03
CEP290-207ENST00000552810 DNAH7Q8WXX0 4024 aa2.39□□□□□ -2.03
CEP290-207ENST00000552810 MT1BP07438 61 aa2.39□□□□□ -2.03
CEP290-207ENST00000552810 KRTAP19-1Q8IUB9 90 aa2.39□□□□□ -2.03
CEP290-207ENST00000552810 KIAA1109Q2LD37 5005 aa2.36□□□□□ -2.03
CEP290-207ENST00000552810 DNAH6Q9C0G6 4158 aa2.35□□□□□ -2.03
CEP290-207ENST00000552810 KRTAP9-6A0A140TA67 174 aa2.34□□□□□ -2.04
CEP290-207ENST00000552810 KRTAP9-7A8MTY7 169 aa2.34□□□□□ -2.04
CEP290-207ENST00000552810 VPS13BQ7Z7G8 4022 aa2.33□□□□□ -2.04
CEP290-207ENST00000552810 SYNE2Q8WXH0 6885 aaKnown RBP2.32□□□□□ -2.04
CEP290-207ENST00000552810 KMT2AQ03164 3969 aa2.31□□□□□ -2.04
CEP290-207ENST00000552810 HMCN2Q8NDA2 5059 aa2.3□□□□□ -2.04
CEP290-207ENST00000552810 HECTD4Q9Y4D8 3996 aa2.29□□□□□ -2.04
CEP290-207ENST00000552810 MT1LQ93083 61 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms