RNA–Protein interactions for RNA: ENST00000552810.5

CEP290-207, Transcript of centrosomal protein 290, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEP290, Length 7,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-207ENST00000552810 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
CEP290-207ENST00000552810 DCAF8L2P0C7V8 631 aa13.05□□□□□ -0.32
CEP290-207ENST00000552810 MYT1Q01538 1121 aa13.03□□□□□ -0.32
CEP290-207ENST00000552810 PELP1Q8IZL8 1130 aaKnown RBP13□□□□□ -0.33
CEP290-207ENST00000552810 TTBK1Q5TCY1 1321 aaPredicted RBP12.72□□□□□ -0.37
CEP290-207ENST00000552810 ERICH6Q7L0X2 663 aa12.67□□□□□ -0.38
CEP290-207ENST00000552810 SUPT5HO00267 1087 aaKnown RBP12.46□□□□□ -0.41
CEP290-207ENST00000552810 YTHDC1Q96MU7 727 aaKnown RBP12.42□□□□□ -0.42
CEP290-207ENST00000552810 CCER1Q8TC90 406 aaPredicted RBP12.23□□□□□ -0.45
CEP290-207ENST00000552810 RANGAP1P46060 587 aaPredicted RBP12.2□□□□□ -0.46
CEP290-207ENST00000552810 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
CEP290-207ENST00000552810 FAM9AQ8IZU1 332 aaPredicted RBP12.1□□□□□ -0.47
CEP290-207ENST00000552810 CNGB1Q14028 1251 aaPredicted RBP12.09□□□□□ -0.47
CEP290-207ENST00000552810 SHROOM4Q9ULL8 1493 aa12.06□□□□□ -0.48
CEP290-207ENST00000552810 PPARGC1BQ86YN6 1023 aaKnown RBP11.97□□□□□ -0.49
CEP290-207ENST00000552810 DAXXQ9UER7 740 aaPredicted RBP11.9□□□□□ -0.51
CEP290-207ENST00000552810 CENPBP07199 599 aaPredicted RBP11.81□□□□□ -0.52
CEP290-207ENST00000552810 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
CEP290-207ENST00000552810 POLR3GLQ9BT43 218 aa11.78□□□□□ -0.52
CEP290-207ENST00000552810 BCL11AQ9H165 835 aa11.73□□□□□ -0.53
CEP290-207ENST00000552810 BCANQ96GW7 911 aa11.71□□□□□ -0.54
CEP290-207ENST00000552810 NEFLP07196 543 aa11.69□□□□□ -0.54
CEP290-207ENST00000552810 APLP2Q06481 763 aa11.68□□□□□ -0.54
CEP290-207ENST00000552810 CHIC1Q5VXU3 224 aa11.67□□□□□ -0.54
CEP290-207ENST00000552810 EIF5BO60841 1220 aaKnown RBP11.54□□□□□ -0.56
CEP290-207ENST00000552810 ITGAEP38570 1179 aa11.47□□□□□ -0.57
CEP290-207ENST00000552810 ZNF316A6NFI3 1004 aaPredicted RBP11.46□□□□□ -0.58
CEP290-207ENST00000552810 SLC4A1APQ9BWU0 796 aaKnown RBP11.4□□□□□ -0.58
CEP290-207ENST00000552810 RTL5Q5HYW3 569 aaPredicted RBP11.4□□□□□ -0.58
CEP290-207ENST00000552810 ARXQ96QS3 562 aa11.39□□□□□ -0.59
CEP290-207ENST00000552810 CLSPNQ9HAW4 1339 aa11.38□□□□□ -0.59
CEP290-207ENST00000552810 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
CEP290-207ENST00000552810 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
CEP290-207ENST00000552810 NPM2Q86SE8 214 aaKnown RBP11.29□□□□□ -0.6
CEP290-207ENST00000552810 SLC24A1O60721 1099 aa11.26□□□□□ -0.61
CEP290-207ENST00000552810 MYT1LQ9UL68 1186 aa11.24□□□□□ -0.61
CEP290-207ENST00000552810 GTF3C3Q9Y5Q9 886 aa11.23□□□□□ -0.61
CEP290-207ENST00000552810 HRCP23327 699 aa11.23□□□□□ -0.61
CEP290-207ENST00000552810 CDK11BP21127 795 aaKnown RBP11.21□□□□□ -0.61
CEP290-207ENST00000552810 CDK11AQ9UQ88 783 aaPredicted RBP11.21□□□□□ -0.61
CEP290-207ENST00000552810 HNRNPUL2Q1KMD3 747 aaKnown RBP11.19□□□□□ -0.62
CEP290-207ENST00000552810 UBTFP17480 764 aaKnown RBP11.16□□□□□ -0.62
CEP290-207ENST00000552810 NBR1Q14596 966 aa11.15□□□□□ -0.62
CEP290-207ENST00000552810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.12□□□□□ -0.63
CEP290-207ENST00000552810 TULP1O00294 542 aaPredicted RBP11.12□□□□□ -0.63
CEP290-207ENST00000552810 RTN4Q9NQC3 1192 aaKnown RBP11.11□□□□□ -0.63
CEP290-207ENST00000552810 ZEB1P37275 1124 aaPredicted RBP11.08□□□□□ -0.64
CEP290-207ENST00000552810 ZBTB47Q9UFB7 747 aaPredicted RBP11.07□□□□□ -0.64
CEP290-207ENST00000552810 TPRNQ4KMQ1 711 aa11.04□□□□□ -0.64
CEP290-207ENST00000552810 LOC105371045A0A1W2PR82 267 aa11.03□□□□□ -0.64
CEP290-207ENST00000552810 TRIM41Q8WV44 630 aa11.01□□□□□ -0.65
CEP290-207ENST00000552810 SENP3-EIF4A1A0A087X0R7 540 aa11.01□□□□□ -0.65
CEP290-207ENST00000552810 GLIPR1L2Q4G1C9 344 aa10.99□□□□□ -0.65
CEP290-207ENST00000552810 NEUROD1Q13562 356 aa10.98□□□□□ -0.65
CEP290-207ENST00000552810 PRM3Q9NNZ6 103 aa10.97□□□□□ -0.65
CEP290-207ENST00000552810 DIEXFQ68CQ4 756 aaKnown RBP10.97□□□□□ -0.65
CEP290-207ENST00000552810 ZNF326Q5BKZ1 582 aaKnown RBP10.96□□□□□ -0.65
CEP290-207ENST00000552810 ARID4BQ4LE39 1312 aaPredicted RBP10.94□□□□□ -0.66
CEP290-207ENST00000552810 ZBTB7CA1YPR0 619 aa10.91□□□□□ -0.66
CEP290-207ENST00000552810 SALL2Q9Y467 1007 aaPredicted RBP10.91□□□□□ -0.66
CEP290-207ENST00000552810 IRX6P78412 446 aaPredicted RBP10.9□□□□□ -0.66
CEP290-207ENST00000552810 ANP32BQ92688 251 aaKnown RBP10.89□□□□□ -0.67
CEP290-207ENST00000552810 ARID3AQ99856 593 aa10.88□□□□□ -0.67
CEP290-207ENST00000552810 KRI1Q8N9T8 703 aaKnown RBP10.87□□□□□ -0.67
CEP290-207ENST00000552810 SENP3Q9H4L4 574 aaPredicted RBP10.86□□□□□ -0.67
CEP290-207ENST00000552810 CANXP27824 592 aaKnown RBP10.84□□□□□ -0.67
CEP290-207ENST00000552810 TAOK2Q9UL54 1235 aa10.83□□□□□ -0.68
CEP290-207ENST00000552810 PLPPR3Q6T4P5 718 aa10.83□□□□□ -0.68
CEP290-207ENST00000552810 PLEKHG5O94827 1062 aa10.81□□□□□ -0.68
CEP290-207ENST00000552810 TRIM26Q12899 539 aaPredicted RBP10.79□□□□□ -0.68
CEP290-207ENST00000552810 FKBP8Q14318 412 aa10.79□□□□□ -0.68
CEP290-207ENST00000552810 FBXO3Q9UK99 471 aa10.78□□□□□ -0.68
CEP290-207ENST00000552810 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.77□□□□□ -0.68
CEP290-207ENST00000552810 TNNT2P45379 298 aaPredicted RBP10.75□□□□□ -0.69
CEP290-207ENST00000552810 TRIM52Q96A61 297 aa10.74□□□□□ -0.69
CEP290-207ENST00000552810 ANP32AP39687 249 aaKnown RBP10.72□□□□□ -0.69
CEP290-207ENST00000552810 HSP90AA1P07900 732 aaKnown RBP10.72□□□□□ -0.69
CEP290-207ENST00000552810 ARID3CA6NKF2 412 aa10.71□□□□□ -0.69
CEP290-207ENST00000552810 SCAF1Q9H7N4 1312 aaKnown RBP10.71□□□□□ -0.69
CEP290-207ENST00000552810 FAM50AQ14320 339 aaKnown RBP10.71□□□□□ -0.69
CEP290-207ENST00000552810 A0A0G2JS52 829 aa10.7□□□□□ -0.7
CEP290-207ENST00000552810 CALRP27797 417 aaKnown RBP10.67□□□□□ -0.7
CEP290-207ENST00000552810 CLSTN1O94985 981 aa10.66□□□□□ -0.7
CEP290-207ENST00000552810 TRIM44Q96DX7 344 aaPredicted RBP10.64□□□□□ -0.71
CEP290-207ENST00000552810 ACIN1Q9UKV3 1341 aaKnown RBP10.64□□□□□ -0.71
CEP290-207ENST00000552810 APPP05067 770 aa10.63□□□□□ -0.71
CEP290-207ENST00000552810 ANO8Q9HCE9 1232 aaPredicted RBP10.63□□□□□ -0.71
CEP290-207ENST00000552810 CCDC136Q96JN2 1154 aa10.62□□□□□ -0.71
CEP290-207ENST00000552810 NAP1L5Q96NT1 182 aaPredicted RBP10.62□□□□□ -0.71
CEP290-207ENST00000552810 LAS1LQ9Y4W2 734 aaKnown RBP10.6□□□□□ -0.71
CEP290-207ENST00000552810 NCLP19338 710 aaKnown RBP10.6□□□□□ -0.71
CEP290-207ENST00000552810 FAM9BQ8IZU0 186 aa10.59□□□□□ -0.71
CEP290-207ENST00000552810 ANP32CO43423 234 aa10.58□□□□□ -0.72
CEP290-207ENST00000552810 HIRIP3Q9BW71 556 aaPredicted RBP10.57□□□□□ -0.72
CEP290-207ENST00000552810 NEFMP07197 916 aa10.54□□□□□ -0.72
CEP290-207ENST00000552810 PLCB2Q00722 1185 aa10.53□□□□□ -0.72
CEP290-207ENST00000552810 ERICH6BQ5W0A0 696 aa10.51□□□□□ -0.73
CEP290-207ENST00000552810 PDE4CQ08493 712 aa10.5□□□□□ -0.73
CEP290-207ENST00000552810 SPRYD3Q8NCJ5 442 aa10.5□□□□□ -0.73
CEP290-207ENST00000552810 DNTTIP2Q5QJE6 756 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms