RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 MP68P56378 58 aa4.98□□□□□ -1.61
GCN1-202ENST00000547263 MT-ATP8P03928 68 aa4.97□□□□□ -1.61
GCN1-202ENST00000547263 SPRR2GQ9BYE4 73 aa4.97□□□□□ -1.61
GCN1-202ENST00000547263 SSPOA2VEC9 5147 aa4.96□□□□□ -1.61
GCN1-202ENST00000547263 H0YAA0 97 aa4.95□□□□□ -1.62
GCN1-202ENST00000547263 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.94□□□□□ -1.62
GCN1-202ENST00000547263 KRTAP19-8Q3LI54 63 aa4.94□□□□□ -1.62
GCN1-202ENST00000547263 MT1BP07438 61 aa4.91□□□□□ -1.62
GCN1-202ENST00000547263 SCGB1A1P11684 91 aa4.91□□□□□ -1.62
GCN1-202ENST00000547263 FCGBPQ9Y6R7 5405 aaPredicted RBP4.9□□□□□ -1.62
GCN1-202ENST00000547263 FAM236AA0A1B0GUQ0 79 aa4.9□□□□□ -1.63
GCN1-202ENST00000547263 FAM236BA0A1B0GV22 79 aa4.9□□□□□ -1.63
GCN1-202ENST00000547263 NDUFC1O43677 76 aa4.9□□□□□ -1.63
GCN1-202ENST00000547263 DMAC1Q96GE9 116 aa4.9□□□□□ -1.63
GCN1-202ENST00000547263 TRAV7A0A075B6U4 112 aa4.89□□□□□ -1.63
GCN1-202ENST00000547263 SMIM20Q8N5G0 67 aa4.89□□□□□ -1.63
GCN1-202ENST00000547263 CRIPTQ9P021 101 aa4.88□□□□□ -1.63
GCN1-202ENST00000547263 Q5VV11 94 aa4.83□□□□□ -1.64
GCN1-202ENST00000547263 SVIPQ8NHG7 77 aa4.83□□□□□ -1.64
GCN1-202ENST00000547263 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
GCN1-202ENST00000547263 ADM2Q7Z4H4 148 aa4.78□□□□□ -1.64
GCN1-202ENST00000547263 KRTAP10-5P60370 271 aa4.77□□□□□ -1.65
GCN1-202ENST00000547263 KRTAP3-2Q9BYR7 98 aa4.77□□□□□ -1.65
GCN1-202ENST00000547263 SERP2Q8N6R1 65 aa4.76□□□□□ -1.65
GCN1-202ENST00000547263 ACYP2P14621 99 aa4.75□□□□□ -1.65
GCN1-202ENST00000547263 SPANXA2-OT1Q8N9U9 137 aa4.74□□□□□ -1.65
GCN1-202ENST00000547263 P0C880 135 aa4.73□□□□□ -1.65
GCN1-202ENST00000547263 SNURFQ9Y675 71 aa4.73□□□□□ -1.65
GCN1-202ENST00000547263 A6NN06 94 aa4.72□□□□□ -1.65
GCN1-202ENST00000547263 C20orf197Q8N268 126 aa4.7□□□□□ -1.66
GCN1-202ENST00000547263 MACF1Q9UPN3 7388 aaKnown RBP4.68□□□□□ -1.66
GCN1-202ENST00000547263 KRTAP6-3Q3LI67 103 aa4.67□□□□□ -1.66
GCN1-202ENST00000547263 COX7CP15954 63 aa4.64□□□□□ -1.67
GCN1-202ENST00000547263 SPTSSBQ8NFR3 76 aa4.64□□□□□ -1.67
GCN1-202ENST00000547263 R4GN34 69 aa4.64□□□□□ -1.67
GCN1-202ENST00000547263 MT1XP80297 61 aa4.62□□□□□ -1.67
GCN1-202ENST00000547263 M0QZ58 72 aa4.61□□□□□ -1.67
GCN1-202ENST00000547263 CHKB-CPT1BH3BT56 60 aa4.59□□□□□ -1.67
GCN1-202ENST00000547263 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
GCN1-202ENST00000547263 H7BZZ5 65 aa4.58□□□□□ -1.68
GCN1-202ENST00000547263 CYSTM1Q9H1C7 97 aa4.58□□□□□ -1.68
GCN1-202ENST00000547263 KRTAP5-9P26371 169 aa4.55□□□□□ -1.68
GCN1-202ENST00000547263 PLAC4Q8WY50 150 aa4.55□□□□□ -1.68
GCN1-202ENST00000547263 PRO2289Q9P1D8 64 aa4.55□□□□□ -1.68
GCN1-202ENST00000547263 COA5Q86WW8 74 aa4.54□□□□□ -1.68
GCN1-202ENST00000547263 KRTAP12-2P59991 146 aa4.52□□□□□ -1.69
GCN1-202ENST00000547263 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
GCN1-202ENST00000547263 LINC01554Q52M75 96 aa4.48□□□□□ -1.69
GCN1-202ENST00000547263 ANAPC13Q9BS18 74 aa4.46□□□□□ -1.7
GCN1-202ENST00000547263 CCDC179H3BU77 68 aa4.41□□□□□ -1.7
GCN1-202ENST00000547263 KRTAP10-12P60413 245 aa4.41□□□□□ -1.7
GCN1-202ENST00000547263 KRTAP10-7P60409 375 aaPredicted RBP4.38□□□□□ -1.71
GCN1-202ENST00000547263 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
GCN1-202ENST00000547263 SEC61GP60059 68 aa4.36□□□□□ -1.71
GCN1-202ENST00000547263 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
GCN1-202ENST00000547263 SERP1Q9Y6X1 66 aa4.36□□□□□ -1.71
GCN1-202ENST00000547263 ATP5EP56381 51 aaPredicted RBP4.35□□□□□ -1.71
GCN1-202ENST00000547263 KRTAP8-1Q8IUC2 63 aa4.34□□□□□ -1.71
GCN1-202ENST00000547263 A0A1B0GU33 70 aa4.33□□□□□ -1.72
GCN1-202ENST00000547263 NEBP20929 6669 aa4.33□□□□□ -1.72
GCN1-202ENST00000547263 KMT2DO14686 5537 aa4.33□□□□□ -1.72
GCN1-202ENST00000547263 SPRR2FQ96RM1 72 aa4.32□□□□□ -1.72
GCN1-202ENST00000547263 SPATA8Q6RVD6 105 aa4.3□□□□□ -1.72
GCN1-202ENST00000547263 MUC12Q9UKN1 5478 aa4.29□□□□□ -1.72
GCN1-202ENST00000547263 KRTAP12-1P59990 96 aa4.28□□□□□ -1.72
GCN1-202ENST00000547263 A0A1B0GU69 56 aa4.27□□□□□ -1.73
GCN1-202ENST00000547263 TMEM258P61165 79 aa4.27□□□□□ -1.73
GCN1-202ENST00000547263 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
GCN1-202ENST00000547263 A0A0D9SG42 100 aa4.24□□□□□ -1.73
GCN1-202ENST00000547263 CAMK2N1Q7Z7J9 78 aa4.24□□□□□ -1.73
GCN1-202ENST00000547263 SPRR2EP22531 72 aa4.23□□□□□ -1.73
GCN1-202ENST00000547263 SPRR2BP35325 72 aa4.23□□□□□ -1.73
GCN1-202ENST00000547263 SPRR2AP35326 72 aa4.23□□□□□ -1.73
GCN1-202ENST00000547263 LINC01558Q9Y6Z2 57 aa4.23□□□□□ -1.73
GCN1-202ENST00000547263 MDN1Q9NU22 5596 aa4.21□□□□□ -1.73
GCN1-202ENST00000547263 KRTAP20-1Q3LI63 56 aa4.21□□□□□ -1.74
GCN1-202ENST00000547263 SMIM26A0A096LP01 95 aa4.2□□□□□ -1.74
GCN1-202ENST00000547263 A8MU10 97 aa4.17□□□□□ -1.74
GCN1-202ENST00000547263 SPINT4Q6UDR6 99 aa4.17□□□□□ -1.74
GCN1-202ENST00000547263 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
GCN1-202ENST00000547263 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
GCN1-202ENST00000547263 KRTAP19-7Q3SYF9 63 aa4.15□□□□□ -1.75
GCN1-202ENST00000547263 PRR15LQ9BU68 103 aa4.15□□□□□ -1.75
GCN1-202ENST00000547263 MT1EP04732 61 aa4.09□□□□□ -1.75
GCN1-202ENST00000547263 SPRR2DP22532 72 aa4.08□□□□□ -1.76
GCN1-202ENST00000547263 C10orf95Q9H7T3 257 aa4.07□□□□□ -1.76
GCN1-202ENST00000547263 UQCR11O14957 56 aa4.06□□□□□ -1.76
GCN1-202ENST00000547263 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
GCN1-202ENST00000547263 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
GCN1-202ENST00000547263 KRTAP2-1Q9BYU5 128 aa4.04□□□□□ -1.76
GCN1-202ENST00000547263 Q1T7F1 81 aa4.02□□□□□ -1.77
GCN1-202ENST00000547263 KRTAP19-3Q7Z4W3 81 aa4.02□□□□□ -1.77
GCN1-202ENST00000547263 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
GCN1-202ENST00000547263 V9GYY9 64 aa4□□□□□ -1.77
GCN1-202ENST00000547263 TNP1P09430 55 aa3.99□□□□□ -1.77
GCN1-202ENST00000547263 LCE3BQ5TA77 95 aa3.99□□□□□ -1.77
GCN1-202ENST00000547263 MIR22HGQ0VDD5 57 aa3.97□□□□□ -1.77
GCN1-202ENST00000547263 LCE3AQ5TA76 89 aa3.96□□□□□ -1.78
GCN1-202ENST00000547263 MT1GP13640 62 aa3.94□□□□□ -1.78
GCN1-202ENST00000547263 PCP4P48539 62 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms