RNA–Protein interactions for RNA: ENST00000546964.5

PFKM-206, Transcript of phosphofructokinase, muscle, humanhuman

TSL 1 (best)

Gene PFKM, Length 3,063 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-206ENST00000546964 DNAH2Q9P225 4427 aa5.15□□□□□ -1.59
PFKM-206ENST00000546964 HECTD4Q9Y4D8 3996 aa5.13□□□□□ -1.59
PFKM-206ENST00000546964 MYCBP2O75592 4640 aa5.11□□□□□ -1.59
PFKM-206ENST00000546964 KRTAP13-2Q52LG2 175 aa5.05□□□□□ -1.6
PFKM-206ENST00000546964 APOBP04114 4563 aaKnown RBP5.04□□□□□ -1.6
PFKM-206ENST00000546964 DYNC2H1Q8NCM8 4307 aaKnown RBP5.04□□□□□ -1.6
PFKM-206ENST00000546964 PLECQ15149 4684 aaKnown RBP5□□□□□ -1.61
PFKM-206ENST00000546964 STARD9Q9P2P6 4700 aa4.99□□□□□ -1.61
PFKM-206ENST00000546964 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
PFKM-206ENST00000546964 LORP23490 312 aaPredicted RBP4.94□□□□□ -1.62
PFKM-206ENST00000546964 PP632Q6XCG6 107 aa4.93□□□□□ -1.62
PFKM-206ENST00000546964 DNAH6Q9C0G6 4158 aa4.89□□□□□ -1.63
PFKM-206ENST00000546964 RYR2Q92736 4967 aa4.89□□□□□ -1.63
PFKM-206ENST00000546964 SACSQ9NZJ4 4579 aa4.89□□□□□ -1.63
PFKM-206ENST00000546964 M0QZ58 72 aa4.88□□□□□ -1.63
PFKM-206ENST00000546964 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
PFKM-206ENST00000546964 KMT2CQ8NEZ4 4911 aaKnown RBP4.88□□□□□ -1.63
PFKM-206ENST00000546964 HYDINQ4G0P3 5121 aa4.87□□□□□ -1.63
PFKM-206ENST00000546964 RYR3Q15413 4870 aa4.86□□□□□ -1.63
PFKM-206ENST00000546964 BIRC6Q9NR09 4857 aa4.8□□□□□ -1.64
PFKM-206ENST00000546964 PKHD1P08F94 4074 aa4.79□□□□□ -1.64
PFKM-206ENST00000546964 A0A1B0GVY2 172 aa4.77□□□□□ -1.65
PFKM-206ENST00000546964 LRP1BQ9NZR2 4599 aa4.71□□□□□ -1.66
PFKM-206ENST00000546964 KRTAP1-4P0C5Y4 121 aa4.69□□□□□ -1.66
PFKM-206ENST00000546964 KRTAP10-2P60368 255 aa4.69□□□□□ -1.66
PFKM-206ENST00000546964 EPPK1P58107 5090 aaKnown RBP4.67□□□□□ -1.66
PFKM-206ENST00000546964 DYNC1H1Q14204 4646 aaKnown RBP4.66□□□□□ -1.66
PFKM-206ENST00000546964 HERC2O95714 4834 aa4.64□□□□□ -1.67
PFKM-206ENST00000546964 DNAH5Q8TE73 4624 aa4.63□□□□□ -1.67
PFKM-206ENST00000546964 FAT2Q9NYQ8 4349 aa4.63□□□□□ -1.67
PFKM-206ENST00000546964 VPS13BQ7Z7G8 4022 aa4.62□□□□□ -1.67
PFKM-206ENST00000546964 KRTAP10-1P60331 282 aa4.62□□□□□ -1.67
PFKM-206ENST00000546964 LCE2CQ5TA81 110 aa4.62□□□□□ -1.67
PFKM-206ENST00000546964 SMR3BP02814 79 aaPredicted RBP4.6□□□□□ -1.67
PFKM-206ENST00000546964 LCE2AQ5TA79 106 aaPredicted RBP4.59□□□□□ -1.67
PFKM-206ENST00000546964 PKD1P98161 4303 aa4.59□□□□□ -1.67
PFKM-206ENST00000546964 FAT1Q14517 4588 aa4.59□□□□□ -1.68
PFKM-206ENST00000546964 HSPG2P98160 4391 aa4.58□□□□□ -1.68
PFKM-206ENST00000546964 RPS29P62273 56 aaKnown RBP4.56□□□□□ -1.68
PFKM-206ENST00000546964 Q5VSD8 79 aa4.54□□□□□ -1.68
PFKM-206ENST00000546964 KIAA1109Q2LD37 5005 aa4.52□□□□□ -1.69
PFKM-206ENST00000546964 RYR1P21817 5038 aa4.52□□□□□ -1.69
PFKM-206ENST00000546964 KRTAP17-1Q9BYP8 105 aa4.52□□□□□ -1.69
PFKM-206ENST00000546964 LPAP08519 4548 aa4.51□□□□□ -1.69
PFKM-206ENST00000546964 LRP1Q07954 4544 aaKnown RBP4.5□□□□□ -1.69
PFKM-206ENST00000546964 TNP1P09430 55 aa4.49□□□□□ -1.69
PFKM-206ENST00000546964 KRTAP10-10P60014 251 aa4.48□□□□□ -1.69
PFKM-206ENST00000546964 KRTAP4-5Q9BYR2 181 aa4.43□□□□□ -1.7
PFKM-206ENST00000546964 PCLOQ9Y6V0 5065 aa4.39□□□□□ -1.71
PFKM-206ENST00000546964 PKHD1L1Q86WI1 4243 aa4.38□□□□□ -1.71
PFKM-206ENST00000546964 LCE2BO14633 110 aa4.37□□□□□ -1.71
PFKM-206ENST00000546964 KRTAP10-4P60372 401 aaPredicted RBP4.37□□□□□ -1.71
PFKM-206ENST00000546964 FAT3Q8TDW7 4589 aa4.36□□□□□ -1.71
PFKM-206ENST00000546964 ABCA13Q86UQ4 5058 aa4.34□□□□□ -1.71
PFKM-206ENST00000546964 LCE3AQ5TA76 89 aa4.26□□□□□ -1.73
PFKM-206ENST00000546964 MT1HL1P0DM35 61 aa4.22□□□□□ -1.73
PFKM-206ENST00000546964 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
PFKM-206ENST00000546964 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
PFKM-206ENST00000546964 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
PFKM-206ENST00000546964 TNXBP22105 4242 aa4.15□□□□□ -1.75
PFKM-206ENST00000546964 LRP2P98164 4655 aa4.14□□□□□ -1.75
PFKM-206ENST00000546964 HERC1Q15751 4861 aa4.13□□□□□ -1.75
PFKM-206ENST00000546964 KRTAP10-12P60413 245 aa4.12□□□□□ -1.75
PFKM-206ENST00000546964 HMCN2Q8NDA2 5059 aa4.09□□□□□ -1.76
PFKM-206ENST00000546964 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.76
PFKM-206ENST00000546964 MUC2Q02817 5179 aa4.03□□□□□ -1.76
PFKM-206ENST00000546964 RNF213Q63HN8 5207 aa3.97□□□□□ -1.77
PFKM-206ENST00000546964 LCE1DQ5T752 114 aa3.96□□□□□ -1.78
PFKM-206ENST00000546964 UBR4Q5T4S7 5183 aa3.95□□□□□ -1.78
PFKM-206ENST00000546964 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
PFKM-206ENST00000546964 MUC17Q685J3 4493 aa3.91□□□□□ -1.78
PFKM-206ENST00000546964 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
PFKM-206ENST00000546964 KRTAP10-5P60370 271 aa3.91□□□□□ -1.78
PFKM-206ENST00000546964 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
PFKM-206ENST00000546964 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
PFKM-206ENST00000546964 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
PFKM-206ENST00000546964 FLGP20930 4061 aaPredicted RBP3.85□□□□□ -1.79
PFKM-206ENST00000546964 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
PFKM-206ENST00000546964 FAT4Q6V0I7 4981 aa3.84□□□□□ -1.79
PFKM-206ENST00000546964 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
PFKM-206ENST00000546964 KRTAP2-3P0C7H8 128 aa3.8□□□□□ -1.8
PFKM-206ENST00000546964 KRTAP2-4Q9BYR9 128 aa3.8□□□□□ -1.8
PFKM-206ENST00000546964 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
PFKM-206ENST00000546964 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
PFKM-206ENST00000546964 KRTAP4-1Q9BYQ7 146 aa3.79□□□□□ -1.8
PFKM-206ENST00000546964 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
PFKM-206ENST00000546964 M0R2T5 61 aa3.78□□□□□ -1.8
PFKM-206ENST00000546964 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
PFKM-206ENST00000546964 KRTAP10-7P60409 375 aaPredicted RBP3.69□□□□□ -1.82
PFKM-206ENST00000546964 KRTAP19-2Q3LHN2 52 aa3.69□□□□□ -1.82
PFKM-206ENST00000546964 KRTAP9-2Q9BYQ4 174 aa3.65□□□□□ -1.82
PFKM-206ENST00000546964 MUC19Q7Z5P9 8384 aa3.63□□□□□ -1.83
PFKM-206ENST00000546964 KMT2DO14686 5537 aa3.63□□□□□ -1.83
PFKM-206ENST00000546964 KRTAP4-7Q9BYR0 210 aa3.61□□□□□ -1.83
PFKM-206ENST00000546964 PRM1P04553 51 aa3.6□□□□□ -1.83
PFKM-206ENST00000546964 KRTAP9-7A8MTY7 169 aa3.6□□□□□ -1.83
PFKM-206ENST00000546964 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.84
PFKM-206ENST00000546964 MT1HP80294 61 aa3.58□□□□□ -1.84
PFKM-206ENST00000546964 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
PFKM-206ENST00000546964 SPRR2GQ9BYE4 73 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms