RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 SPENQ96T58 3664 aaKnown RBP0.02□□□□□ -2.41
COPA-206ENST00000545266 SPTBN5Q9NRC6 3674 aaKnown RBP0.02□□□□□ -2.41
COPA-206ENST00000545266 NBEAL2Q6ZNJ1 2754 aa0.02□□□□□ -2.41
COPA-206ENST00000545266 KALRNO60229 2985 aa0.02□□□□□ -2.41
COPA-206ENST00000545266 HTTP42858 3142 aa0.02□□□□□ -2.41
COPA-206ENST00000545266 AKAP9Q99996 3911 aa0.01□□□□□ -2.41
COPA-206ENST00000545266 DNAH6Q9C0G6 4158 aa0.01□□□□□ -2.41
COPA-206ENST00000545266 FASNP49327 2511 aaKnown RBP0.01□□□□□ -2.41
COPA-206ENST00000545266 TRIOO75962 3097 aa0.01□□□□□ -2.41
COPA-206ENST00000545266 LAMA5O15230 3695 aa0.01□□□□□ -2.41
COPA-206ENST00000545266 SSPOA2VEC9 5147 aa0□□□□□ -2.41
COPA-206ENST00000545266 SMR3BP02814 79 aaPredicted RBP0□□□□□ -2.41
COPA-206ENST00000545266 SNRPGP62308 76 aaKnown RBP0□□□□□ -2.41
COPA-206ENST00000545266 CHD7Q9P2D1 2997 aa0□□□□□ -2.41
COPA-206ENST00000545266 RIF1Q5UIP0 2472 aaKnown RBP-0.01□□□□□ -2.41
COPA-206ENST00000545266 DNAH7Q8WXX0 4024 aa-0.01□□□□□ -2.41
COPA-206ENST00000545266 MYO18BQ8IUG5 2567 aa-0.01□□□□□ -2.41
COPA-206ENST00000545266 SPART-AS1P0CW21 52 aa-0.01□□□□□ -2.41
COPA-206ENST00000545266 DSTQ03001 7570 aaKnown RBP-0.01□□□□□ -2.41
COPA-206ENST00000545266 FRYQ5TBA9 3013 aa-0.01□□□□□ -2.41
COPA-206ENST00000545266 LAMA1P25391 3075 aa-0.02□□□□□ -2.41
COPA-206ENST00000545266 NBEAQ8NFP9 2946 aa-0.02□□□□□ -2.41
COPA-206ENST00000545266 DNAH1Q9P2D7 4330 aa-0.02□□□□□ -2.41
COPA-206ENST00000545266 HIVEP1P15822 2718 aa-0.02□□□□□ -2.41
COPA-206ENST00000545266 NBPF19A0A087WUL8 3843 aa-0.02□□□□□ -2.41
COPA-206ENST00000545266 RPL39LQ96EH5 51 aaKnown RBP-0.02□□□□□ -2.41
COPA-206ENST00000545266 CCDC168Q8NDH2 2452 aa-0.02□□□□□ -2.41
COPA-206ENST00000545266 DNAH8Q96JB1 4490 aa-0.02□□□□□ -2.41
COPA-206ENST00000545266 UTP20O75691 2785 aaKnown RBP-0.02□□□□□ -2.41
COPA-206ENST00000545266 EPG5Q9HCE0 2579 aa-0.02□□□□□ -2.41
COPA-206ENST00000545266 CELSR3Q9NYQ7 3312 aa-0.03□□□□□ -2.41
COPA-206ENST00000545266 KRTAP19-7Q3SYF9 63 aa-0.03□□□□□ -2.41
COPA-206ENST00000545266 MUC2Q02817 5179 aa-0.03□□□□□ -2.41
COPA-206ENST00000545266 HERC1Q15751 4861 aa-0.04□□□□□ -2.42
COPA-206ENST00000545266 TOMM7Q9P0U1 55 aa-0.04□□□□□ -2.42
COPA-206ENST00000545266 TLN2Q9Y4G6 2542 aa-0.04□□□□□ -2.42
COPA-206ENST00000545266 NBEAL1Q6ZS30 2694 aa-0.05□□□□□ -2.42
COPA-206ENST00000545266 KRTAP6-1Q3LI64 71 aa-0.05□□□□□ -2.42
COPA-206ENST00000545266 STAB2Q8WWQ8 2551 aa-0.05□□□□□ -2.42
COPA-206ENST00000545266 PCLOQ9Y6V0 5065 aa-0.06□□□□□ -2.42
COPA-206ENST00000545266 DEFB1P60022 68 aa-0.06□□□□□ -2.42
COPA-206ENST00000545266 LEAP2Q969E1 77 aa-0.07□□□□□ -2.42
COPA-206ENST00000545266 STARD9Q9P2P6 4700 aa-0.08□□□□□ -2.42
COPA-206ENST00000545266 MGAM2Q2M2H8 2515 aa-0.08□□□□□ -2.42
COPA-206ENST00000545266 MXRA5Q9NR99 2828 aa-0.08□□□□□ -2.42
COPA-206ENST00000545266 ZFHX4Q86UP3 3567 aa-0.08□□□□□ -2.42
COPA-206ENST00000545266 ADGRG4Q8IZF6 3080 aa-0.08□□□□□ -2.42
COPA-206ENST00000545266 WDR87Q6ZQQ6 2873 aa-0.08□□□□□ -2.42
COPA-206ENST00000545266 USP9YO00507 2555 aaPredicted RBP-0.09□□□□□ -2.42
COPA-206ENST00000545266 MT1HP80294 61 aa-0.09□□□□□ -2.42
COPA-206ENST00000545266 NEBP20929 6669 aa-0.09□□□□□ -2.42
COPA-206ENST00000545266 PLECQ15149 4684 aaKnown RBP-0.09□□□□□ -2.42
COPA-206ENST00000545266 USP9XQ93008 2570 aaPredicted RBP-0.1□□□□□ -2.43
COPA-206ENST00000545266 DNAH10Q8IVF4 4471 aa-0.1□□□□□ -2.43
COPA-206ENST00000545266 KRTAP19-8Q3LI54 63 aa-0.11□□□□□ -2.43
COPA-206ENST00000545266 CRYBG3Q68DQ2 2970 aa-0.12□□□□□ -2.43
COPA-206ENST00000545266 MUC17Q685J3 4493 aa-0.12□□□□□ -2.43
COPA-206ENST00000545266 MT1EP04732 61 aa-0.12□□□□□ -2.43
COPA-206ENST00000545266 DNAH17Q9UFH2 4485 aa-0.12□□□□□ -2.43
COPA-206ENST00000545266 RELNP78509 3460 aa-0.12□□□□□ -2.43
COPA-206ENST00000545266 DYNC1H1Q14204 4646 aaKnown RBP-0.13□□□□□ -2.43
COPA-206ENST00000545266 CMYA5Q8N3K9 4069 aa-0.13□□□□□ -2.43
COPA-206ENST00000545266 CSMD1Q96PZ7 3565 aa-0.13□□□□□ -2.43
COPA-206ENST00000545266 KRTAP20-1Q3LI63 56 aa-0.13□□□□□ -2.43
COPA-206ENST00000545266 SRCAPQ6ZRS2 3230 aa-0.13□□□□□ -2.43
COPA-206ENST00000545266 DMXL2Q8TDJ6 3036 aa-0.13□□□□□ -2.43
COPA-206ENST00000545266 KMT2CQ8NEZ4 4911 aaKnown RBP-0.13□□□□□ -2.43
COPA-206ENST00000545266 ITPR3Q14573 2671 aa-0.14□□□□□ -2.43
COPA-206ENST00000545266 MUC12Q9UKN1 5478 aa-0.14□□□□□ -2.43
COPA-206ENST00000545266 MT1LQ93083 61 aa-0.15□□□□□ -2.43
COPA-206ENST00000545266 MGAQ8IWI9 3026 aa-0.16□□□□□ -2.43
COPA-206ENST00000545266 MT1XP80297 61 aa-0.16□□□□□ -2.44
COPA-206ENST00000545266 ITPR1Q14643 2758 aa-0.17□□□□□ -2.44
COPA-206ENST00000545266 LAMA3Q16787 3333 aa-0.17□□□□□ -2.44
COPA-206ENST00000545266 USH2AO75445 5202 aa-0.17□□□□□ -2.44
COPA-206ENST00000545266 CFAP54Q96N23 3096 aa-0.17□□□□□ -2.44
COPA-206ENST00000545266 DNAH5Q8TE73 4624 aa-0.18□□□□□ -2.44
COPA-206ENST00000545266 UBR4Q5T4S7 5183 aa-0.18□□□□□ -2.44
COPA-206ENST00000545266 C5orf42Q9H799 3197 aa-0.18□□□□□ -2.44
COPA-206ENST00000545266 ATMQ13315 3056 aa-0.19□□□□□ -2.44
COPA-206ENST00000545266 RYR1P21817 5038 aa-0.19□□□□□ -2.44
COPA-206ENST00000545266 LINC01590Q5TEZ4 76 aa-0.19□□□□□ -2.44
COPA-206ENST00000545266 DEFB104AQ8WTQ1 72 aa-0.19□□□□□ -2.44
COPA-206ENST00000545266 TRRAPQ9Y4A5 3859 aa-0.19□□□□□ -2.44
COPA-206ENST00000545266 MT4P47944 62 aa-0.2□□□□□ -2.44
COPA-206ENST00000545266 KRTAP20-2Q3LI61 65 aa-0.2□□□□□ -2.44
COPA-206ENST00000545266 ARHGAP5-AS1Q96IT6 56 aa-0.2□□□□□ -2.44
COPA-206ENST00000545266 EYSQ5T1H1 3165 aa-0.2□□□□□ -2.44
COPA-206ENST00000545266 DOPEY1Q5JWR5 2465 aa-0.21□□□□□ -2.44
COPA-206ENST00000545266 LAMA2P24043 3122 aaKnown RBP-0.21□□□□□ -2.44
COPA-206ENST00000545266 LRBAP50851 2863 aa-0.21□□□□□ -2.44
COPA-206ENST00000545266 SPTAN1Q13813 2472 aaKnown RBP-0.22□□□□□ -2.44
COPA-206ENST00000545266 DNAH12Q6ZR08 3092 aa-0.22□□□□□ -2.45
COPA-206ENST00000545266 SMG1Q96Q15 3661 aaKnown RBP-0.23□□□□□ -2.45
COPA-206ENST00000545266 TEX15Q9BXT5 2789 aa-0.23□□□□□ -2.45
COPA-206ENST00000545266 DNHD1Q96M86 4753 aa-0.23□□□□□ -2.45
COPA-206ENST00000545266 CFAP46Q8IYW2 2715 aa-0.24□□□□□ -2.45
COPA-206ENST00000545266 VPS13CQ709C8 3753 aa-0.25□□□□□ -2.45
COPA-206ENST00000545266 K7EIM0 57 aa-0.25□□□□□ -2.45
COPA-206ENST00000545266 DEFB136Q30KP8 78 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms