RNA–Protein interactions for RNA: ENST00000544691.6

SDR39U1-203, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best)

Gene SDR39U1, Length 1,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-203ENST00000544691 TRAV7A0A075B6U4 112 aa9.04□□□□□ -0.96
SDR39U1-203ENST00000544691 SMIM20Q8N5G0 67 aa9.03□□□□□ -0.96
SDR39U1-203ENST00000544691 LCE2BO14633 110 aa9.01□□□□□ -0.97
SDR39U1-203ENST00000544691 A8MUN3 132 aa9□□□□□ -0.97
SDR39U1-203ENST00000544691 USH2AO75445 5202 aa8.93□□□□□ -0.98
SDR39U1-203ENST00000544691 NDUFC1O43677 76 aa8.9□□□□□ -0.98
SDR39U1-203ENST00000544691 DMAC1Q96GE9 116 aa8.9□□□□□ -0.99
SDR39U1-203ENST00000544691 SNURFQ9Y675 71 aa8.88□□□□□ -0.99
SDR39U1-203ENST00000544691 PCP4P48539 62 aa8.86□□□□□ -0.99
SDR39U1-203ENST00000544691 SERP2Q8N6R1 65 aa8.86□□□□□ -0.99
SDR39U1-203ENST00000544691 C20orf197Q8N268 126 aa8.81□□□□□ -1
SDR39U1-203ENST00000544691 KRTAP19-1Q8IUB9 90 aa8.79□□□□□ -1
SDR39U1-203ENST00000544691 SSPOA2VEC9 5147 aa8.77□□□□□ -1.01
SDR39U1-203ENST00000544691 H0YAA0 97 aa8.74□□□□□ -1.01
SDR39U1-203ENST00000544691 ACYP2P14621 99 aa8.71□□□□□ -1.01
SDR39U1-203ENST00000544691 SPRR2GQ9BYE4 73 aa8.7□□□□□ -1.02
SDR39U1-203ENST00000544691 ADM2Q7Z4H4 148 aa8.69□□□□□ -1.02
SDR39U1-203ENST00000544691 COX7CP15954 63 aa8.68□□□□□ -1.02
SDR39U1-203ENST00000544691 SPANXA2-OT1Q8N9U9 137 aa8.65□□□□□ -1.02
SDR39U1-203ENST00000544691 CRIPTQ9P021 101 aa8.62□□□□□ -1.03
SDR39U1-203ENST00000544691 KRTAP19-6Q3LI70 58 aa8.6□□□□□ -1.03
SDR39U1-203ENST00000544691 KRTAP19-8Q3LI54 63 aa8.59□□□□□ -1.03
SDR39U1-203ENST00000544691 MT1BP07438 61 aa8.58□□□□□ -1.04
SDR39U1-203ENST00000544691 CYSTM1Q9H1C7 97 aa8.58□□□□□ -1.04
SDR39U1-203ENST00000544691 FCGBPQ9Y6R7 5405 aaPredicted RBP8.57□□□□□ -1.04
SDR39U1-203ENST00000544691 P0C880 135 aa8.56□□□□□ -1.04
SDR39U1-203ENST00000544691 CHKB-CPT1BH3BT56 60 aa8.55□□□□□ -1.04
SDR39U1-203ENST00000544691 Q5VV11 94 aa8.55□□□□□ -1.04
SDR39U1-203ENST00000544691 ANAPC13Q9BS18 74 aa8.54□□□□□ -1.04
SDR39U1-203ENST00000544691 KRTAP3-2Q9BYR7 98 aa8.53□□□□□ -1.04
SDR39U1-203ENST00000544691 H7BZZ5 65 aa8.5□□□□□ -1.05
SDR39U1-203ENST00000544691 SPTSSBQ8NFR3 76 aa8.5□□□□□ -1.05
SDR39U1-203ENST00000544691 COA5Q86WW8 74 aa8.43□□□□□ -1.06
SDR39U1-203ENST00000544691 R4GN34 69 aa8.43□□□□□ -1.06
SDR39U1-203ENST00000544691 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.42□□□□□ -1.06
SDR39U1-203ENST00000544691 CCDC179H3BU77 68 aa8.4□□□□□ -1.06
SDR39U1-203ENST00000544691 M0QZ58 72 aa8.39□□□□□ -1.07
SDR39U1-203ENST00000544691 A6NN06 94 aa8.33□□□□□ -1.08
SDR39U1-203ENST00000544691 KRTAP10-5P60370 271 aa8.29□□□□□ -1.08
SDR39U1-203ENST00000544691 LINC01554Q52M75 96 aa8.27□□□□□ -1.09
SDR39U1-203ENST00000544691 KRTAP9-7A8MTY7 169 aa8.21□□□□□ -1.1
SDR39U1-203ENST00000544691 SVIPQ8NHG7 77 aa8.21□□□□□ -1.1
SDR39U1-203ENST00000544691 MACF1Q9UPN3 7388 aaKnown RBP8.21□□□□□ -1.1
SDR39U1-203ENST00000544691 PLAC4Q8WY50 150 aa8.2□□□□□ -1.1
SDR39U1-203ENST00000544691 KRTAP13-4Q3LI77 160 aa8.14□□□□□ -1.11
SDR39U1-203ENST00000544691 MT1XP80297 61 aa8.13□□□□□ -1.11
SDR39U1-203ENST00000544691 ATP5EP56381 51 aaPredicted RBP8.12□□□□□ -1.11
SDR39U1-203ENST00000544691 SEC61GP60059 68 aa8.1□□□□□ -1.11
SDR39U1-203ENST00000544691 SERP1Q9Y6X1 66 aa8.09□□□□□ -1.11
SDR39U1-203ENST00000544691 PRO2289Q9P1D8 64 aa8.07□□□□□ -1.12
SDR39U1-203ENST00000544691 SYNE2Q8WXH0 6885 aaKnown RBP8.05□□□□□ -1.12
SDR39U1-203ENST00000544691 TMEM258P61165 79 aa8.05□□□□□ -1.12
SDR39U1-203ENST00000544691 A0A1B0GU33 70 aa7.98□□□□□ -1.13
SDR39U1-203ENST00000544691 A0A1B0GU69 56 aa7.97□□□□□ -1.13
SDR39U1-203ENST00000544691 SPATA8Q6RVD6 105 aa7.96□□□□□ -1.14
SDR39U1-203ENST00000544691 KRTAP6-3Q3LI67 103 aa7.94□□□□□ -1.14
SDR39U1-203ENST00000544691 A0A0D9SG42 100 aa7.91□□□□□ -1.14
SDR39U1-203ENST00000544691 RPS28P62857 69 aaKnown RBP7.83□□□□□ -1.16
SDR39U1-203ENST00000544691 KRTAP12-2P59991 146 aa7.82□□□□□ -1.16
SDR39U1-203ENST00000544691 LINC01558Q9Y6Z2 57 aa7.82□□□□□ -1.16
SDR39U1-203ENST00000544691 KMT2DO14686 5537 aa7.81□□□□□ -1.16
SDR39U1-203ENST00000544691 CAMK2N1Q7Z7J9 78 aa7.79□□□□□ -1.16
SDR39U1-203ENST00000544691 PRR15LQ9BU68 103 aa7.78□□□□□ -1.16
SDR39U1-203ENST00000544691 KRTAP10-7P60409 375 aaPredicted RBP7.78□□□□□ -1.16
SDR39U1-203ENST00000544691 KRTAP12-1P59990 96 aa7.75□□□□□ -1.17
SDR39U1-203ENST00000544691 SPINT4Q6UDR6 99 aa7.75□□□□□ -1.17
SDR39U1-203ENST00000544691 KRTAP5-9P26371 169 aa7.74□□□□□ -1.17
SDR39U1-203ENST00000544691 A8MU10 97 aa7.73□□□□□ -1.17
SDR39U1-203ENST00000544691 SMIM26A0A096LP01 95 aa7.72□□□□□ -1.17
SDR39U1-203ENST00000544691 KRTAP4-8A0A0G2JLE6 195 aa7.7□□□□□ -1.18
SDR39U1-203ENST00000544691 KRTAP4-8Q9BYQ9 185 aa7.7□□□□□ -1.18
SDR39U1-203ENST00000544691 KRTAP10-12P60413 245 aa7.69□□□□□ -1.18
SDR39U1-203ENST00000544691 KRTAP8-1Q8IUC2 63 aa7.67□□□□□ -1.18
SDR39U1-203ENST00000544691 MUC12Q9UKN1 5478 aa7.64□□□□□ -1.19
SDR39U1-203ENST00000544691 SPRR2FQ96RM1 72 aa7.6□□□□□ -1.19
SDR39U1-203ENST00000544691 UQCR11O14957 56 aa7.56□□□□□ -1.2
SDR39U1-203ENST00000544691 Q1T7F1 81 aa7.52□□□□□ -1.21
SDR39U1-203ENST00000544691 PSPHP1O15172 72 aa7.51□□□□□ -1.21
SDR39U1-203ENST00000544691 V9GYY9 64 aa7.51□□□□□ -1.21
SDR39U1-203ENST00000544691 MDN1Q9NU22 5596 aa7.5□□□□□ -1.21
SDR39U1-203ENST00000544691 NEBP20929 6669 aa7.48□□□□□ -1.21
SDR39U1-203ENST00000544691 MIR22HGQ0VDD5 57 aa7.42□□□□□ -1.22
SDR39U1-203ENST00000544691 SPRR2EP22531 72 aa7.4□□□□□ -1.22
SDR39U1-203ENST00000544691 SPRR2BP35325 72 aa7.4□□□□□ -1.22
SDR39U1-203ENST00000544691 SPRR2AP35326 72 aa7.4□□□□□ -1.22
SDR39U1-203ENST00000544691 C10orf95Q9H7T3 257 aa7.38□□□□□ -1.23
SDR39U1-203ENST00000544691 LCE1AQ5T7P2 110 aa7.36□□□□□ -1.23
SDR39U1-203ENST00000544691 PRO0628Q9UI54 55 aa7.28□□□□□ -1.24
SDR39U1-203ENST00000544691 TNP1P09430 55 aa7.26□□□□□ -1.25
SDR39U1-203ENST00000544691 KRTAP19-7Q3SYF9 63 aa7.26□□□□□ -1.25
SDR39U1-203ENST00000544691 A6NED7 52 aa7.25□□□□□ -1.25
SDR39U1-203ENST00000544691 KRTAP20-1Q3LI63 56 aa7.21□□□□□ -1.26
SDR39U1-203ENST00000544691 K7ERS5 55 aa7.18□□□□□ -1.26
SDR39U1-203ENST00000544691 MT1EP04732 61 aa7.17□□□□□ -1.26
SDR39U1-203ENST00000544691 KRTAP19-5Q3LI72 72 aa7.16□□□□□ -1.26
SDR39U1-203ENST00000544691 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
SDR39U1-203ENST00000544691 SPRR2DP22532 72 aa7.14□□□□□ -1.27
SDR39U1-203ENST00000544691 KRTAP2-3P0C7H8 128 aa7.09□□□□□ -1.27
SDR39U1-203ENST00000544691 KRTAP2-4Q9BYR9 128 aa7.09□□□□□ -1.27
SDR39U1-203ENST00000544691 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms