RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 Q5VSD8 79 aa8.48□□□□□ -1.05
SNRNP70-203ENST00000544278 RYR1P21817 5038 aa8.45□□□□□ -1.06
SNRNP70-203ENST00000544278 EPPK1P58107 5090 aaKnown RBP8.45□□□□□ -1.06
SNRNP70-203ENST00000544278 KRTAP3-1Q9BYR8 98 aa8.44□□□□□ -1.06
SNRNP70-203ENST00000544278 ROMO1P60602 79 aa8.42□□□□□ -1.06
SNRNP70-203ENST00000544278 TNXBP22105 4242 aa8.42□□□□□ -1.06
SNRNP70-203ENST00000544278 A8MUU9 505 aa8.4□□□□□ -1.06
SNRNP70-203ENST00000544278 C20orf166-AS1Q96NR2 134 aa8.39□□□□□ -1.07
SNRNP70-203ENST00000544278 LPAP08519 4548 aa8.37□□□□□ -1.07
SNRNP70-203ENST00000544278 RPS29P62273 56 aaKnown RBP8.36□□□□□ -1.07
SNRNP70-203ENST00000544278 KRTAP25-1Q3LHN0 102 aa8.35□□□□□ -1.07
SNRNP70-203ENST00000544278 LRP2P98164 4655 aa8.34□□□□□ -1.07
SNRNP70-203ENST00000544278 H0YAA0 97 aa8.32□□□□□ -1.08
SNRNP70-203ENST00000544278 P0C880 135 aa8.28□□□□□ -1.08
SNRNP70-203ENST00000544278 ABCA13Q86UQ4 5058 aa8.27□□□□□ -1.08
SNRNP70-203ENST00000544278 KRTAP10-8P60410 259 aa8.27□□□□□ -1.09
SNRNP70-203ENST00000544278 A0A1B0GU33 70 aa8.21□□□□□ -1.09
SNRNP70-203ENST00000544278 XP32Q5T750 250 aa8.2□□□□□ -1.1
SNRNP70-203ENST00000544278 KRTAP4-5Q9BYR2 181 aa8.2□□□□□ -1.1
SNRNP70-203ENST00000544278 COX6B2Q6YFQ2 88 aa8.18□□□□□ -1.1
SNRNP70-203ENST00000544278 SPINT4Q6UDR6 99 aa8.16□□□□□ -1.1
SNRNP70-203ENST00000544278 MT1HL1P0DM35 61 aa8.15□□□□□ -1.11
SNRNP70-203ENST00000544278 RPL37P61927 97 aaKnown RBP8.11□□□□□ -1.11
SNRNP70-203ENST00000544278 A0A0D9SG42 100 aa8.08□□□□□ -1.12
SNRNP70-203ENST00000544278 H1FX-AS1Q4G0G2 97 aa8.07□□□□□ -1.12
SNRNP70-203ENST00000544278 K7ERS5 55 aa8.07□□□□□ -1.12
SNRNP70-203ENST00000544278 NDUFAF8A1L188 74 aa8.06□□□□□ -1.12
SNRNP70-203ENST00000544278 LUZP6Q538Z0 58 aa8.06□□□□□ -1.12
SNRNP70-203ENST00000544278 C10orf95Q9H7T3 257 aa8.05□□□□□ -1.12
SNRNP70-203ENST00000544278 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
SNRNP70-203ENST00000544278 KRTAP13-4Q3LI77 160 aa7.97□□□□□ -1.13
SNRNP70-203ENST00000544278 MUC2Q02817 5179 aa7.97□□□□□ -1.13
SNRNP70-203ENST00000544278 S4R3F8 94 aa7.96□□□□□ -1.14
SNRNP70-203ENST00000544278 HERC2O95714 4834 aa7.94□□□□□ -1.14
SNRNP70-203ENST00000544278 TPRXLQ17RH7 258 aa7.94□□□□□ -1.14
SNRNP70-203ENST00000544278 KRTAP10-6P60371 365 aaPredicted RBP7.92□□□□□ -1.14
SNRNP70-203ENST00000544278 KRTAP3-2Q9BYR7 98 aa7.87□□□□□ -1.15
SNRNP70-203ENST00000544278 HERC1Q15751 4861 aa7.77□□□□□ -1.17
SNRNP70-203ENST00000544278 KRTAP4-1Q9BYQ7 146 aa7.72□□□□□ -1.17
SNRNP70-203ENST00000544278 KRTAP15-1Q3LI76 137 aa7.69□□□□□ -1.18
SNRNP70-203ENST00000544278 KRTAP12-2P59991 146 aa7.67□□□□□ -1.18
SNRNP70-203ENST00000544278 BIRC6Q9NR09 4857 aa7.64□□□□□ -1.19
SNRNP70-203ENST00000544278 MUC17Q685J3 4493 aa7.62□□□□□ -1.19
SNRNP70-203ENST00000544278 PCLOQ9Y6V0 5065 aa7.62□□□□□ -1.19
SNRNP70-203ENST00000544278 FAT4Q6V0I7 4981 aa7.59□□□□□ -1.19
SNRNP70-203ENST00000544278 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
SNRNP70-203ENST00000544278 M0QZ58 72 aa7.55□□□□□ -1.2
SNRNP70-203ENST00000544278 RNF213Q63HN8 5207 aa7.54□□□□□ -1.2
SNRNP70-203ENST00000544278 KRTAP12-1P59990 96 aa7.52□□□□□ -1.21
SNRNP70-203ENST00000544278 R4GN34 69 aa7.47□□□□□ -1.21
SNRNP70-203ENST00000544278 CAMK2N1Q7Z7J9 78 aa7.41□□□□□ -1.22
SNRNP70-203ENST00000544278 UBR4Q5T4S7 5183 aa7.36□□□□□ -1.23
SNRNP70-203ENST00000544278 KRTAP23-1A1A580 65 aa7.35□□□□□ -1.23
SNRNP70-203ENST00000544278 HMCN2Q8NDA2 5059 aa7.35□□□□□ -1.23
SNRNP70-203ENST00000544278 KRTAP19-2Q3LHN2 52 aa7.31□□□□□ -1.24
SNRNP70-203ENST00000544278 PLAC4Q8WY50 150 aa7.23□□□□□ -1.25
SNRNP70-203ENST00000544278 FLGP20930 4061 aaPredicted RBP7.22□□□□□ -1.25
SNRNP70-203ENST00000544278 M0R2T5 61 aa7.09□□□□□ -1.27
SNRNP70-203ENST00000544278 LCE2CQ5TA81 110 aa7□□□□□ -1.29
SNRNP70-203ENST00000544278 MT1HP80294 61 aa6.84□□□□□ -1.31
SNRNP70-203ENST00000544278 KRTAP10-10P60014 251 aa6.82□□□□□ -1.32
SNRNP70-203ENST00000544278 MT1FP04733 61 aa6.78□□□□□ -1.32
SNRNP70-203ENST00000544278 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
SNRNP70-203ENST00000544278 USH2AO75445 5202 aa6.72□□□□□ -1.33
SNRNP70-203ENST00000544278 MT2AP02795 61 aa6.72□□□□□ -1.33
SNRNP70-203ENST00000544278 PRO2289Q9P1D8 64 aa6.69□□□□□ -1.34
SNRNP70-203ENST00000544278 TNP1P09430 55 aa6.67□□□□□ -1.34
SNRNP70-203ENST00000544278 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
SNRNP70-203ENST00000544278 SPRR2GQ9BYE4 73 aa6.62□□□□□ -1.35
SNRNP70-203ENST00000544278 PP632Q6XCG6 107 aa6.61□□□□□ -1.35
SNRNP70-203ENST00000544278 FSIP2Q5CZC0 6907 aa6.55□□□□□ -1.36
SNRNP70-203ENST00000544278 KMT2DO14686 5537 aa6.5□□□□□ -1.37
SNRNP70-203ENST00000544278 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
SNRNP70-203ENST00000544278 MT1BP07438 61 aa6.44□□□□□ -1.38
SNRNP70-203ENST00000544278 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.39
SNRNP70-203ENST00000544278 LCE2DQ5TA82 110 aaPredicted RBP6.37□□□□□ -1.39
SNRNP70-203ENST00000544278 MT1XP80297 61 aa6.36□□□□□ -1.39
SNRNP70-203ENST00000544278 KRTAP10-5P60370 271 aa6.36□□□□□ -1.39
SNRNP70-203ENST00000544278 KRTAP9-3Q9BYQ3 159 aa6.33□□□□□ -1.4
SNRNP70-203ENST00000544278 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
SNRNP70-203ENST00000544278 KRTAP19-8Q3LI54 63 aa6.31□□□□□ -1.4
SNRNP70-203ENST00000544278 SPRR5A0A1B0GTR4 108 aa6.29□□□□□ -1.4
SNRNP70-203ENST00000544278 LCE2BO14633 110 aa6.24□□□□□ -1.41
SNRNP70-203ENST00000544278 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
SNRNP70-203ENST00000544278 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
SNRNP70-203ENST00000544278 INE1O15225 51 aa6.11□□□□□ -1.43
SNRNP70-203ENST00000544278 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
SNRNP70-203ENST00000544278 KRTAP12-3P60328 96 aa6.1□□□□□ -1.43
SNRNP70-203ENST00000544278 KRTAP8-1Q8IUC2 63 aa6.07□□□□□ -1.44
SNRNP70-203ENST00000544278 KRTAP19-5Q3LI72 72 aa5.99□□□□□ -1.45
SNRNP70-203ENST00000544278 SSPOA2VEC9 5147 aa5.98□□□□□ -1.45
SNRNP70-203ENST00000544278 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
SNRNP70-203ENST00000544278 MUC12Q9UKN1 5478 aa5.78□□□□□ -1.48
SNRNP70-203ENST00000544278 DSTQ03001 7570 aaKnown RBP5.78□□□□□ -1.48
SNRNP70-203ENST00000544278 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
SNRNP70-203ENST00000544278 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
SNRNP70-203ENST00000544278 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
SNRNP70-203ENST00000544278 KRTAP9-6A8MVA2 160 aa5.65□□□□□ -1.5
SNRNP70-203ENST00000544278 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
SNRNP70-203ENST00000544278 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms