RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 A0A0D9SG42 100 aa9.43□□□□□ -0.9
CCT4-204ENST00000544079 VPS13BQ7Z7G8 4022 aa9.42□□□□□ -0.9
CCT4-204ENST00000544079 KRTAP3-3Q9BYR6 98 aa9.42□□□□□ -0.9
CCT4-204ENST00000544079 C10orf95Q9H7T3 257 aa9.42□□□□□ -0.9
CCT4-204ENST00000544079 KRTAP17-1Q9BYP8 105 aa9.39□□□□□ -0.91
CCT4-204ENST00000544079 PKD1P98161 4303 aa9.38□□□□□ -0.91
CCT4-204ENST00000544079 S4R3F8 94 aa9.37□□□□□ -0.91
CCT4-204ENST00000544079 HERC2O95714 4834 aa9.3□□□□□ -0.92
CCT4-204ENST00000544079 PKHD1L1Q86WI1 4243 aa9.26□□□□□ -0.93
CCT4-204ENST00000544079 XP32Q5T750 250 aa9.26□□□□□ -0.93
CCT4-204ENST00000544079 KRTAP12-2P59991 146 aa9.25□□□□□ -0.93
CCT4-204ENST00000544079 FAT2Q9NYQ8 4349 aa9.21□□□□□ -0.93
CCT4-204ENST00000544079 KRTAP12-1P59990 96 aa9.2□□□□□ -0.94
CCT4-204ENST00000544079 PCLOQ9Y6V0 5065 aa9.16□□□□□ -0.94
CCT4-204ENST00000544079 KIAA1109Q2LD37 5005 aa9.13□□□□□ -0.95
CCT4-204ENST00000544079 PKHD1P08F94 4074 aa9.09□□□□□ -0.95
CCT4-204ENST00000544079 M0QZ58 72 aa9.07□□□□□ -0.96
CCT4-204ENST00000544079 RYR1P21817 5038 aa9.07□□□□□ -0.96
CCT4-204ENST00000544079 KRTAP10-4P60372 401 aaPredicted RBP9.05□□□□□ -0.96
CCT4-204ENST00000544079 APOBP04114 4563 aaKnown RBP9.03□□□□□ -0.96
CCT4-204ENST00000544079 KRTAP10-8P60410 259 aa9.02□□□□□ -0.97
CCT4-204ENST00000544079 DMBT1Q9UGM3 2413 aaPredicted RBP9.01□□□□□ -0.97
CCT4-204ENST00000544079 A0A0A0MQY5 61 aa9.01□□□□□ -0.97
CCT4-204ENST00000544079 A0A1B0GVY2 172 aa9.01□□□□□ -0.97
CCT4-204ENST00000544079 DYNC1H1Q14204 4646 aaKnown RBP9□□□□□ -0.97
CCT4-204ENST00000544079 SMR3BP02814 79 aaPredicted RBP8.98□□□□□ -0.97
CCT4-204ENST00000544079 ABCA13Q86UQ4 5058 aa8.96□□□□□ -0.98
CCT4-204ENST00000544079 LRP1Q07954 4544 aaKnown RBP8.88□□□□□ -0.99
CCT4-204ENST00000544079 KRTAP4-5Q9BYR2 181 aa8.88□□□□□ -0.99
CCT4-204ENST00000544079 LUZP6Q538Z0 58 aa8.88□□□□□ -0.99
CCT4-204ENST00000544079 PLAC4Q8WY50 150 aa8.87□□□□□ -0.99
CCT4-204ENST00000544079 HSPG2P98160 4391 aa8.86□□□□□ -0.99
CCT4-204ENST00000544079 FAT3Q8TDW7 4589 aa8.83□□□□□ -1
CCT4-204ENST00000544079 TNXBP22105 4242 aa8.81□□□□□ -1
CCT4-204ENST00000544079 FAT1Q14517 4588 aa8.71□□□□□ -1.01
CCT4-204ENST00000544079 HERC1Q15751 4861 aa8.63□□□□□ -1.03
CCT4-204ENST00000544079 PP632Q6XCG6 107 aa8.63□□□□□ -1.03
CCT4-204ENST00000544079 R4GN34 69 aa8.6□□□□□ -1.03
CCT4-204ENST00000544079 MYCBP2O75592 4640 aa8.55□□□□□ -1.04
CCT4-204ENST00000544079 Q5VSD8 79 aa8.52□□□□□ -1.04
CCT4-204ENST00000544079 J3QL48 77 aa8.38□□□□□ -1.07
CCT4-204ENST00000544079 LORP23490 312 aaPredicted RBP8.28□□□□□ -1.08
CCT4-204ENST00000544079 SPRR5A0A1B0GTR4 108 aa8.27□□□□□ -1.09
CCT4-204ENST00000544079 KRTAP23-1A1A580 65 aa8.27□□□□□ -1.09
CCT4-204ENST00000544079 MT1HL1P0DM35 61 aa8.25□□□□□ -1.09
CCT4-204ENST00000544079 CAMK2N1Q7Z7J9 78 aa8.23□□□□□ -1.09
CCT4-204ENST00000544079 HMCN2Q8NDA2 5059 aa8.22□□□□□ -1.09
CCT4-204ENST00000544079 LPAP08519 4548 aa8.19□□□□□ -1.1
CCT4-204ENST00000544079 SEC61BP60468 96 aaKnown RBP8.16□□□□□ -1.1
CCT4-204ENST00000544079 UBR4Q5T4S7 5183 aa8.14□□□□□ -1.11
CCT4-204ENST00000544079 LRP2P98164 4655 aa8.09□□□□□ -1.12
CCT4-204ENST00000544079 TNP1P09430 55 aa8.07□□□□□ -1.12
CCT4-204ENST00000544079 PRO2289Q9P1D8 64 aa7.96□□□□□ -1.13
CCT4-204ENST00000544079 MUC17Q685J3 4493 aa7.9□□□□□ -1.14
CCT4-204ENST00000544079 KRTAP19-2Q3LHN2 52 aa7.86□□□□□ -1.15
CCT4-204ENST00000544079 RNF213Q63HN8 5207 aa7.86□□□□□ -1.15
CCT4-204ENST00000544079 INE1O15225 51 aa7.82□□□□□ -1.16
CCT4-204ENST00000544079 KRTAP4-1Q9BYQ7 146 aa7.8□□□□□ -1.16
CCT4-204ENST00000544079 FLGP20930 4061 aaPredicted RBP7.65□□□□□ -1.19
CCT4-204ENST00000544079 LCE3AQ5TA76 89 aa7.49□□□□□ -1.21
CCT4-204ENST00000544079 SPRR2GQ9BYE4 73 aa7.47□□□□□ -1.21
CCT4-204ENST00000544079 KRTAP9-2Q9BYQ4 174 aa7.45□□□□□ -1.22
CCT4-204ENST00000544079 LCE2DQ5TA82 110 aaPredicted RBP7.45□□□□□ -1.22
CCT4-204ENST00000544079 MUC2Q02817 5179 aa7.44□□□□□ -1.22
CCT4-204ENST00000544079 KRTAP8-1Q8IUC2 63 aa7.42□□□□□ -1.22
CCT4-204ENST00000544079 FAT4Q6V0I7 4981 aa7.36□□□□□ -1.23
CCT4-204ENST00000544079 LCE2AQ5TA79 106 aaPredicted RBP7.34□□□□□ -1.24
CCT4-204ENST00000544079 KRTAP19-1Q8IUB9 90 aa7.32□□□□□ -1.24
CCT4-204ENST00000544079 KRTAP9-6A0A140TA67 174 aa7.31□□□□□ -1.24
CCT4-204ENST00000544079 KRTAP12-3P60328 96 aa7.15□□□□□ -1.27
CCT4-204ENST00000544079 KRTAP10-12P60413 245 aa7.15□□□□□ -1.27
CCT4-204ENST00000544079 LCE2CQ5TA81 110 aa7.08□□□□□ -1.28
CCT4-204ENST00000544079 KRTAP19-8Q3LI54 63 aa7.04□□□□□ -1.28
CCT4-204ENST00000544079 CRCT1Q9UGL9 99 aa6.99□□□□□ -1.29
CCT4-204ENST00000544079 KRTAP10-5P60370 271 aa6.98□□□□□ -1.29
CCT4-204ENST00000544079 MT1XP80297 61 aa6.95□□□□□ -1.3
CCT4-204ENST00000544079 FSIP2Q5CZC0 6907 aa6.95□□□□□ -1.3
CCT4-204ENST00000544079 KRTAP10-10P60014 251 aa6.92□□□□□ -1.3
CCT4-204ENST00000544079 MT2AP02795 61 aa6.9□□□□□ -1.3
CCT4-204ENST00000544079 MT1FP04733 61 aa6.9□□□□□ -1.3
CCT4-204ENST00000544079 M0R2T5 61 aa6.88□□□□□ -1.31
CCT4-204ENST00000544079 MT1BP07438 61 aa6.85□□□□□ -1.31
CCT4-204ENST00000544079 MT1HP80294 61 aa6.83□□□□□ -1.32
CCT4-204ENST00000544079 KRTAP9-8Q9BYQ0 159 aa6.79□□□□□ -1.32
CCT4-204ENST00000544079 LCE3CQ5T5A8 94 aa6.78□□□□□ -1.32
CCT4-204ENST00000544079 KRTAP10-7P60409 375 aaPredicted RBP6.75□□□□□ -1.33
CCT4-204ENST00000544079 KRTAP2-3P0C7H8 128 aa6.64□□□□□ -1.35
CCT4-204ENST00000544079 KRTAP2-4Q9BYR9 128 aa6.64□□□□□ -1.35
CCT4-204ENST00000544079 KRTAP2-1Q9BYU5 128 aa6.64□□□□□ -1.35
CCT4-204ENST00000544079 KRTAP19-5Q3LI72 72 aa6.6□□□□□ -1.35
CCT4-204ENST00000544079 KRTAP9-7A8MTY7 169 aa6.53□□□□□ -1.36
CCT4-204ENST00000544079 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.53□□□□□ -1.36
CCT4-204ENST00000544079 KRTAP9-6A8MVA2 160 aa6.51□□□□□ -1.37
CCT4-204ENST00000544079 KRTAP9-3Q9BYQ3 159 aa6.48□□□□□ -1.37
CCT4-204ENST00000544079 KRTAP19-4Q3LI73 84 aa6.46□□□□□ -1.37
CCT4-204ENST00000544079 SSPOA2VEC9 5147 aa6.44□□□□□ -1.38
CCT4-204ENST00000544079 USH2AO75445 5202 aa6.43□□□□□ -1.38
CCT4-204ENST00000544079 FCGBPQ9Y6R7 5405 aaPredicted RBP6.33□□□□□ -1.4
CCT4-204ENST00000544079 LCE2BO14633 110 aa6.25□□□□□ -1.41
CCT4-204ENST00000544079 MACF1Q9UPN3 7388 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms