RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 RYR3Q15413 4870 aa9.63□□□□□ -0.87
COPS7A-215ENST00000543155 MT1HL1P0DM35 61 aa9.6□□□□□ -0.87
COPS7A-215ENST00000543155 PRAC1Q96KF2 57 aa9.59□□□□□ -0.87
COPS7A-215ENST00000543155 ADM2Q7Z4H4 148 aa9.58□□□□□ -0.88
COPS7A-215ENST00000543155 DMBT1Q9UGM3 2413 aaPredicted RBP9.52□□□□□ -0.88
COPS7A-215ENST00000543155 KRTAP3-3Q9BYR6 98 aa9.52□□□□□ -0.89
COPS7A-215ENST00000543155 S4R3F8 94 aa9.49□□□□□ -0.89
COPS7A-215ENST00000543155 KIAA1109Q2LD37 5005 aa9.46□□□□□ -0.9
COPS7A-215ENST00000543155 MYCBP2O75592 4640 aa9.44□□□□□ -0.9
COPS7A-215ENST00000543155 KRTAP10-6P60371 365 aaPredicted RBP9.41□□□□□ -0.9
COPS7A-215ENST00000543155 TPRXLQ17RH7 258 aa9.41□□□□□ -0.9
COPS7A-215ENST00000543155 K7ERS5 55 aa9.36□□□□□ -0.91
COPS7A-215ENST00000543155 KRTAP3-2Q9BYR7 98 aa9.36□□□□□ -0.91
COPS7A-215ENST00000543155 CSAG1Q6PB30 78 aa9.35□□□□□ -0.91
COPS7A-215ENST00000543155 KRTAP13-4Q3LI77 160 aa9.28□□□□□ -0.92
COPS7A-215ENST00000543155 EPPK1P58107 5090 aaKnown RBP9.27□□□□□ -0.93
COPS7A-215ENST00000543155 LINC01554Q52M75 96 aa9.27□□□□□ -0.93
COPS7A-215ENST00000543155 P0C880 135 aa9.23□□□□□ -0.93
COPS7A-215ENST00000543155 LRP2P98164 4655 aa9.2□□□□□ -0.94
COPS7A-215ENST00000543155 LPAP08519 4548 aa9.19□□□□□ -0.94
COPS7A-215ENST00000543155 A0A0D9SG42 100 aa9.19□□□□□ -0.94
COPS7A-215ENST00000543155 KRTAP4-5Q9BYR2 181 aa9.19□□□□□ -0.94
COPS7A-215ENST00000543155 KRTAP25-1Q3LHN0 102 aa9.16□□□□□ -0.94
COPS7A-215ENST00000543155 ROMO1P60602 79 aa9.11□□□□□ -0.95
COPS7A-215ENST00000543155 SEC61BP60468 96 aaKnown RBP9.06□□□□□ -0.96
COPS7A-215ENST00000543155 ABCA13Q86UQ4 5058 aa9.06□□□□□ -0.96
COPS7A-215ENST00000543155 M0QZ58 72 aa9□□□□□ -0.97
COPS7A-215ENST00000543155 KRTAP12-2P59991 146 aa8.98□□□□□ -0.97
COPS7A-215ENST00000543155 CRIPTQ9P021 101 aa8.98□□□□□ -0.97
COPS7A-215ENST00000543155 J3QL48 77 aa8.97□□□□□ -0.97
COPS7A-215ENST00000543155 KRTAP12-1P59990 96 aa8.94□□□□□ -0.98
COPS7A-215ENST00000543155 MUC17Q685J3 4493 aa8.93□□□□□ -0.98
COPS7A-215ENST00000543155 SPINT4Q6UDR6 99 aa8.9□□□□□ -0.98
COPS7A-215ENST00000543155 KRTAP4-1Q9BYQ7 146 aa8.87□□□□□ -0.99
COPS7A-215ENST00000543155 R4GN34 69 aa8.78□□□□□ -1
COPS7A-215ENST00000543155 HERC2O95714 4834 aa8.77□□□□□ -1.01
COPS7A-215ENST00000543155 KRTAP19-2Q3LHN2 52 aa8.73□□□□□ -1.01
COPS7A-215ENST00000543155 C10orf95Q9H7T3 257 aa8.71□□□□□ -1.01
COPS7A-215ENST00000543155 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
COPS7A-215ENST00000543155 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
COPS7A-215ENST00000543155 FLGP20930 4061 aaPredicted RBP8.44□□□□□ -1.06
COPS7A-215ENST00000543155 MUC2Q02817 5179 aa8.34□□□□□ -1.07
COPS7A-215ENST00000543155 HMCN2Q8NDA2 5059 aa8.34□□□□□ -1.08
COPS7A-215ENST00000543155 CAMK2N1Q7Z7J9 78 aa8.32□□□□□ -1.08
COPS7A-215ENST00000543155 HERC1Q15751 4861 aa8.32□□□□□ -1.08
COPS7A-215ENST00000543155 KRTAP15-1Q3LI76 137 aa8.3□□□□□ -1.08
COPS7A-215ENST00000543155 LCE2CQ5TA81 110 aa8.24□□□□□ -1.09
COPS7A-215ENST00000543155 PCLOQ9Y6V0 5065 aa8.24□□□□□ -1.09
COPS7A-215ENST00000543155 H3BS24 57 aa8.21□□□□□ -1.1
COPS7A-215ENST00000543155 PP632Q6XCG6 107 aa8.15□□□□□ -1.11
COPS7A-215ENST00000543155 SPRR2GQ9BYE4 73 aa8.05□□□□□ -1.12
COPS7A-215ENST00000543155 M0R2T5 61 aa8.05□□□□□ -1.12
COPS7A-215ENST00000543155 MT1HP80294 61 aa8.04□□□□□ -1.12
COPS7A-215ENST00000543155 PLAC4Q8WY50 150 aa8.02□□□□□ -1.13
COPS7A-215ENST00000543155 TNP1P09430 55 aa8.01□□□□□ -1.13
COPS7A-215ENST00000543155 NDUFAF8A1L188 74 aa8□□□□□ -1.13
COPS7A-215ENST00000543155 KRTAP19-1Q8IUB9 90 aa7.99□□□□□ -1.13
COPS7A-215ENST00000543155 FAT4Q6V0I7 4981 aa7.98□□□□□ -1.13
COPS7A-215ENST00000543155 RNF213Q63HN8 5207 aa7.93□□□□□ -1.14
COPS7A-215ENST00000543155 KRTAP23-1A1A580 65 aa7.93□□□□□ -1.14
COPS7A-215ENST00000543155 MT2AP02795 61 aa7.89□□□□□ -1.15
COPS7A-215ENST00000543155 MT1FP04733 61 aa7.87□□□□□ -1.15
COPS7A-215ENST00000543155 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
COPS7A-215ENST00000543155 UBR4Q5T4S7 5183 aa7.84□□□□□ -1.15
COPS7A-215ENST00000543155 KRTAP9-8Q9BYQ0 159 aa7.83□□□□□ -1.16
COPS7A-215ENST00000543155 KRTAP19-8Q3LI54 63 aa7.72□□□□□ -1.17
COPS7A-215ENST00000543155 LUZP6Q538Z0 58 aa7.62□□□□□ -1.19
COPS7A-215ENST00000543155 MT1BP07438 61 aa7.6□□□□□ -1.19
COPS7A-215ENST00000543155 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
COPS7A-215ENST00000543155 SPRR5A0A1B0GTR4 108 aa7.53□□□□□ -1.2
COPS7A-215ENST00000543155 KRTAP10-5P60370 271 aa7.52□□□□□ -1.2
COPS7A-215ENST00000543155 KRTAP9-3Q9BYQ3 159 aa7.52□□□□□ -1.21
COPS7A-215ENST00000543155 MT1XP80297 61 aa7.51□□□□□ -1.21
COPS7A-215ENST00000543155 KRTAP8-1Q8IUC2 63 aa7.42□□□□□ -1.22
COPS7A-215ENST00000543155 KRTAP10-12P60413 245 aa7.36□□□□□ -1.23
COPS7A-215ENST00000543155 PRO2289Q9P1D8 64 aa7.31□□□□□ -1.24
COPS7A-215ENST00000543155 KRTAP10-7P60409 375 aaPredicted RBP7.27□□□□□ -1.25
COPS7A-215ENST00000543155 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
COPS7A-215ENST00000543155 LCE2BO14633 110 aa7.21□□□□□ -1.26
COPS7A-215ENST00000543155 LCE2AQ5TA79 106 aaPredicted RBP7.18□□□□□ -1.26
COPS7A-215ENST00000543155 A0A0A0MQY5 61 aa7.15□□□□□ -1.27
COPS7A-215ENST00000543155 KRTAP19-5Q3LI72 72 aa6.97□□□□□ -1.29
COPS7A-215ENST00000543155 USH2AO75445 5202 aa6.85□□□□□ -1.31
COPS7A-215ENST00000543155 KRTAP4-8A0A0G2JLE6 195 aa6.81□□□□□ -1.32
COPS7A-215ENST00000543155 LCE3CQ5T5A8 94 aa6.81□□□□□ -1.32
COPS7A-215ENST00000543155 KRTAP4-8Q9BYQ9 185 aa6.81□□□□□ -1.32
COPS7A-215ENST00000543155 KMT2DO14686 5537 aa6.7□□□□□ -1.34
COPS7A-215ENST00000543155 KRTAP19-7Q3SYF9 63 aa6.69□□□□□ -1.34
COPS7A-215ENST00000543155 SSPOA2VEC9 5147 aa6.61□□□□□ -1.35
COPS7A-215ENST00000543155 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
COPS7A-215ENST00000543155 KRTAP19-6Q3LI70 58 aa6.56□□□□□ -1.36
COPS7A-215ENST00000543155 INE1O15225 51 aa6.54□□□□□ -1.36
COPS7A-215ENST00000543155 MT1EP04732 61 aa6.53□□□□□ -1.36
COPS7A-215ENST00000543155 KRTAP9-6A8MVA2 160 aa6.5□□□□□ -1.37
COPS7A-215ENST00000543155 MT1LQ93083 61 aa6.5□□□□□ -1.37
COPS7A-215ENST00000543155 KRTAP4-7Q9BYR0 210 aa6.46□□□□□ -1.38
COPS7A-215ENST00000543155 KRTAP2-3P0C7H8 128 aa6.29□□□□□ -1.4
COPS7A-215ENST00000543155 KRTAP2-4Q9BYR9 128 aa6.29□□□□□ -1.4
COPS7A-215ENST00000543155 KRTAP2-1Q9BYU5 128 aa6.29□□□□□ -1.4
COPS7A-215ENST00000543155 LCE2DQ5TA82 110 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms