RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 DNAH6Q9C0G6 4158 aa3.88□□□□□ -1.79
LRP6-206ENST00000543091 FAT2Q9NYQ8 4349 aa3.86□□□□□ -1.79
LRP6-206ENST00000543091 DNAH2Q9P225 4427 aa3.86□□□□□ -1.79
LRP6-206ENST00000543091 RYR3Q15413 4870 aa3.85□□□□□ -1.79
LRP6-206ENST00000543091 SACSQ9NZJ4 4579 aa3.85□□□□□ -1.79
LRP6-206ENST00000543091 RYR1P21817 5038 aa3.84□□□□□ -1.79
LRP6-206ENST00000543091 BIRC6Q9NR09 4857 aa3.84□□□□□ -1.8
LRP6-206ENST00000543091 CSMD3Q7Z407 3707 aa3.84□□□□□ -1.8
LRP6-206ENST00000543091 KMT2AQ03164 3969 aa3.83□□□□□ -1.8
LRP6-206ENST00000543091 FAT1Q14517 4588 aa3.83□□□□□ -1.8
LRP6-206ENST00000543091 DNAH7Q8WXX0 4024 aa3.83□□□□□ -1.8
LRP6-206ENST00000543091 H0YAA0 97 aa3.78□□□□□ -1.8
LRP6-206ENST00000543091 KRTAP17-1Q9BYP8 105 aa3.78□□□□□ -1.8
LRP6-206ENST00000543091 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
LRP6-206ENST00000543091 KRTAP3-1Q9BYR8 98 aa3.75□□□□□ -1.81
LRP6-206ENST00000543091 PP632Q6XCG6 107 aa3.75□□□□□ -1.81
LRP6-206ENST00000543091 PRO2289Q9P1D8 64 aa3.74□□□□□ -1.81
LRP6-206ENST00000543091 P0C880 135 aa3.73□□□□□ -1.81
LRP6-206ENST00000543091 APOBP04114 4563 aaKnown RBP3.72□□□□□ -1.81
LRP6-206ENST00000543091 HYDINQ4G0P3 5121 aa3.72□□□□□ -1.81
LRP6-206ENST00000543091 DNAH8Q96JB1 4490 aa3.72□□□□□ -1.81
LRP6-206ENST00000543091 KMT2CQ8NEZ4 4911 aaKnown RBP3.71□□□□□ -1.81
LRP6-206ENST00000543091 HERC2O95714 4834 aa3.7□□□□□ -1.82
LRP6-206ENST00000543091 TNP1P09430 55 aa3.68□□□□□ -1.82
LRP6-206ENST00000543091 LYSTQ99698 3801 aa3.68□□□□□ -1.82
LRP6-206ENST00000543091 KRTAP4-1Q9BYQ7 146 aa3.63□□□□□ -1.83
LRP6-206ENST00000543091 VPS13BQ7Z7G8 4022 aa3.63□□□□□ -1.83
LRP6-206ENST00000543091 HECTD4Q9Y4D8 3996 aa3.62□□□□□ -1.83
LRP6-206ENST00000543091 HSPG2P98160 4391 aa3.62□□□□□ -1.83
LRP6-206ENST00000543091 PKHD1P08F94 4074 aa3.58□□□□□ -1.84
LRP6-206ENST00000543091 PKD1P98161 4303 aa3.58□□□□□ -1.84
LRP6-206ENST00000543091 EPPK1P58107 5090 aaKnown RBP3.58□□□□□ -1.84
LRP6-206ENST00000543091 LRP1Q07954 4544 aaKnown RBP3.58□□□□□ -1.84
LRP6-206ENST00000543091 KRTAP3-3Q9BYR6 98 aa3.57□□□□□ -1.84
LRP6-206ENST00000543091 MT1HP80294 61 aa3.56□□□□□ -1.84
LRP6-206ENST00000543091 KRTAP10-6P60371 365 aaPredicted RBP3.55□□□□□ -1.84
LRP6-206ENST00000543091 FAT3Q8TDW7 4589 aa3.51□□□□□ -1.85
LRP6-206ENST00000543091 KRTAP12-2P59991 146 aa3.5□□□□□ -1.85
LRP6-206ENST00000543091 KRTAP12-1P59990 96 aa3.5□□□□□ -1.85
LRP6-206ENST00000543091 MYCBP2O75592 4640 aa3.49□□□□□ -1.85
LRP6-206ENST00000543091 KRTAP3-2Q9BYR7 98 aa3.49□□□□□ -1.85
LRP6-206ENST00000543091 ABCA13Q86UQ4 5058 aa3.48□□□□□ -1.85
LRP6-206ENST00000543091 C10orf95Q9H7T3 257 aa3.48□□□□□ -1.85
LRP6-206ENST00000543091 HERC1Q15751 4861 aa3.48□□□□□ -1.85
LRP6-206ENST00000543091 KRTAP13-4Q3LI77 160 aa3.48□□□□□ -1.85
LRP6-206ENST00000543091 FRAS1Q86XX4 4008 aa3.48□□□□□ -1.85
LRP6-206ENST00000543091 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
LRP6-206ENST00000543091 MT2AP02795 61 aa3.45□□□□□ -1.86
LRP6-206ENST00000543091 PCLOQ9Y6V0 5065 aa3.45□□□□□ -1.86
LRP6-206ENST00000543091 INE1O15225 51 aa3.44□□□□□ -1.86
LRP6-206ENST00000543091 PKHD1L1Q86WI1 4243 aa3.42□□□□□ -1.86
LRP6-206ENST00000543091 MT1FP04733 61 aa3.38□□□□□ -1.87
LRP6-206ENST00000543091 LRP2P98164 4655 aa3.37□□□□□ -1.87
LRP6-206ENST00000543091 LORP23490 312 aaPredicted RBP3.37□□□□□ -1.87
LRP6-206ENST00000543091 SPRR2GQ9BYE4 73 aa3.35□□□□□ -1.87
LRP6-206ENST00000543091 LCE2CQ5TA81 110 aa3.34□□□□□ -1.87
LRP6-206ENST00000543091 KRTAP23-1A1A580 65 aa3.32□□□□□ -1.88
LRP6-206ENST00000543091 TNXBP22105 4242 aa3.31□□□□□ -1.88
LRP6-206ENST00000543091 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
LRP6-206ENST00000543091 KRTAP19-2Q3LHN2 52 aa3.27□□□□□ -1.89
LRP6-206ENST00000543091 KRTAP9-8Q9BYQ0 159 aa3.26□□□□□ -1.89
LRP6-206ENST00000543091 LPAP08519 4548 aa3.23□□□□□ -1.89
LRP6-206ENST00000543091 HMCN2Q8NDA2 5059 aa3.22□□□□□ -1.89
LRP6-206ENST00000543091 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
LRP6-206ENST00000543091 RNF213Q63HN8 5207 aa3.21□□□□□ -1.9
LRP6-206ENST00000543091 KRTAP19-1Q8IUB9 90 aa3.2□□□□□ -1.9
LRP6-206ENST00000543091 KRTAP8-1Q8IUC2 63 aa3.2□□□□□ -1.9
LRP6-206ENST00000543091 LCE2AQ5TA79 106 aaPredicted RBP3.2□□□□□ -1.9
LRP6-206ENST00000543091 KRTAP9-3Q9BYQ3 159 aa3.18□□□□□ -1.9
LRP6-206ENST00000543091 MUC17Q685J3 4493 aa3.13□□□□□ -1.91
LRP6-206ENST00000543091 UBR4Q5T4S7 5183 aa3.13□□□□□ -1.91
LRP6-206ENST00000543091 KRTAP12-3P60328 96 aa3.13□□□□□ -1.91
LRP6-206ENST00000543091 FAT4Q6V0I7 4981 aa3.12□□□□□ -1.91
LRP6-206ENST00000543091 KRTAP10-5P60370 271 aa3.11□□□□□ -1.91
LRP6-206ENST00000543091 KRTAP9-2Q9BYQ4 174 aa3.11□□□□□ -1.91
LRP6-206ENST00000543091 CRCT1Q9UGL9 99 aa3.11□□□□□ -1.91
LRP6-206ENST00000543091 MT1BP07438 61 aa3.11□□□□□ -1.91
LRP6-206ENST00000543091 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
LRP6-206ENST00000543091 LCE2DQ5TA82 110 aaPredicted RBP3.11□□□□□ -1.91
LRP6-206ENST00000543091 FLGP20930 4061 aaPredicted RBP3.11□□□□□ -1.91
LRP6-206ENST00000543091 LCE2BO14633 110 aa3.07□□□□□ -1.92
LRP6-206ENST00000543091 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
LRP6-206ENST00000543091 MT1XP80297 61 aa3.03□□□□□ -1.92
LRP6-206ENST00000543091 KRTAP19-6Q3LI70 58 aa2.99□□□□□ -1.93
LRP6-206ENST00000543091 KRTAP9-6A0A140TA67 174 aa2.99□□□□□ -1.93
LRP6-206ENST00000543091 KRTAP10-7P60409 375 aaPredicted RBP2.96□□□□□ -1.94
LRP6-206ENST00000543091 KRTAP19-5Q3LI72 72 aa2.94□□□□□ -1.94
LRP6-206ENST00000543091 KRTAP19-4Q3LI73 84 aa2.93□□□□□ -1.94
LRP6-206ENST00000543091 SPRR2EP22531 72 aa2.91□□□□□ -1.94
LRP6-206ENST00000543091 SPRR2BP35325 72 aa2.91□□□□□ -1.94
LRP6-206ENST00000543091 SPRR2AP35326 72 aa2.91□□□□□ -1.94
LRP6-206ENST00000543091 MUC2Q02817 5179 aa2.9□□□□□ -1.95
LRP6-206ENST00000543091 FSIP2Q5CZC0 6907 aa2.86□□□□□ -1.95
LRP6-206ENST00000543091 KRTAP4-8A0A0G2JLE6 195 aa2.85□□□□□ -1.95
LRP6-206ENST00000543091 KRTAP4-8Q9BYQ9 185 aa2.85□□□□□ -1.95
LRP6-206ENST00000543091 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.96
LRP6-206ENST00000543091 SPRR2DP22532 72 aa2.83□□□□□ -1.96
LRP6-206ENST00000543091 MT1GP13640 62 aa2.8□□□□□ -1.96
LRP6-206ENST00000543091 LCE3CQ5T5A8 94 aa2.78□□□□□ -1.96
LRP6-206ENST00000543091 KRTAP9-7A8MTY7 169 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms