RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 KRTAP10-6P60371 365 aaPredicted RBP3.86□□□□□ -1.79
FNDC3A-206ENST00000541916 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
FNDC3A-206ENST00000541916 CRCT1Q9UGL9 99 aa3.85□□□□□ -1.79
FNDC3A-206ENST00000541916 PLECQ15149 4684 aaKnown RBP3.84□□□□□ -1.79
FNDC3A-206ENST00000541916 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
FNDC3A-206ENST00000541916 DNAH10Q8IVF4 4471 aa3.84□□□□□ -1.79
FNDC3A-206ENST00000541916 KRTAP10-12P60413 245 aa3.84□□□□□ -1.8
FNDC3A-206ENST00000541916 DNAH3Q8TD57 4116 aa3.82□□□□□ -1.8
FNDC3A-206ENST00000541916 ANK2Q01484 3957 aa3.81□□□□□ -1.8
FNDC3A-206ENST00000541916 DYNC1H1Q14204 4646 aaKnown RBP3.8□□□□□ -1.8
FNDC3A-206ENST00000541916 KRTAP4-1Q9BYQ7 146 aa3.79□□□□□ -1.8
FNDC3A-206ENST00000541916 CMYA5Q8N3K9 4069 aa3.79□□□□□ -1.8
FNDC3A-206ENST00000541916 KRTAP3-3Q9BYR6 98 aa3.77□□□□□ -1.81
FNDC3A-206ENST00000541916 CSMD3Q7Z407 3707 aa3.76□□□□□ -1.81
FNDC3A-206ENST00000541916 RYR1P21817 5038 aa3.75□□□□□ -1.81
FNDC3A-206ENST00000541916 BIRC6Q9NR09 4857 aa3.75□□□□□ -1.81
FNDC3A-206ENST00000541916 VPS13DQ5THJ4 4388 aa3.74□□□□□ -1.81
FNDC3A-206ENST00000541916 FAT2Q9NYQ8 4349 aa3.74□□□□□ -1.81
FNDC3A-206ENST00000541916 PRKDCP78527 4128 aaKnown RBP3.73□□□□□ -1.81
FNDC3A-206ENST00000541916 LRP1BQ9NZR2 4599 aa3.73□□□□□ -1.81
FNDC3A-206ENST00000541916 DYNC2H1Q8NCM8 4307 aaKnown RBP3.72□□□□□ -1.81
FNDC3A-206ENST00000541916 KRTAP3-2Q9BYR7 98 aa3.72□□□□□ -1.81
FNDC3A-206ENST00000541916 MT2AP02795 61 aa3.71□□□□□ -1.82
FNDC3A-206ENST00000541916 STARD9Q9P2P6 4700 aa3.7□□□□□ -1.82
FNDC3A-206ENST00000541916 DNAH17Q9UFH2 4485 aa3.7□□□□□ -1.82
FNDC3A-206ENST00000541916 DNAH2Q9P225 4427 aa3.67□□□□□ -1.82
FNDC3A-206ENST00000541916 RYR3Q15413 4870 aa3.67□□□□□ -1.82
FNDC3A-206ENST00000541916 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
FNDC3A-206ENST00000541916 DNAH6Q9C0G6 4158 aa3.65□□□□□ -1.83
FNDC3A-206ENST00000541916 MT1FP04733 61 aa3.62□□□□□ -1.83
FNDC3A-206ENST00000541916 KRTAP12-3P60328 96 aa3.61□□□□□ -1.83
FNDC3A-206ENST00000541916 FAT1Q14517 4588 aa3.61□□□□□ -1.83
FNDC3A-206ENST00000541916 SACSQ9NZJ4 4579 aa3.6□□□□□ -1.83
FNDC3A-206ENST00000541916 KMT2AQ03164 3969 aa3.6□□□□□ -1.83
FNDC3A-206ENST00000541916 DNAH7Q8WXX0 4024 aa3.58□□□□□ -1.84
FNDC3A-206ENST00000541916 RYR2Q92736 4967 aa3.57□□□□□ -1.84
FNDC3A-206ENST00000541916 SPRR2EP22531 72 aa3.56□□□□□ -1.84
FNDC3A-206ENST00000541916 SPRR2BP35325 72 aa3.56□□□□□ -1.84
FNDC3A-206ENST00000541916 SPRR2AP35326 72 aa3.56□□□□□ -1.84
FNDC3A-206ENST00000541916 FRAS1Q86XX4 4008 aa3.56□□□□□ -1.84
FNDC3A-206ENST00000541916 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
FNDC3A-206ENST00000541916 DNAH8Q96JB1 4490 aa3.55□□□□□ -1.84
FNDC3A-206ENST00000541916 KIAA1109Q2LD37 5005 aa3.54□□□□□ -1.84
FNDC3A-206ENST00000541916 HERC2O95714 4834 aa3.53□□□□□ -1.84
FNDC3A-206ENST00000541916 KRTAP9-2Q9BYQ4 174 aa3.52□□□□□ -1.85
FNDC3A-206ENST00000541916 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
FNDC3A-206ENST00000541916 SPRR2GQ9BYE4 73 aa3.5□□□□□ -1.85
FNDC3A-206ENST00000541916 VPS13BQ7Z7G8 4022 aa3.5□□□□□ -1.85
FNDC3A-206ENST00000541916 LYSTQ99698 3801 aa3.48□□□□□ -1.85
FNDC3A-206ENST00000541916 FAT3Q8TDW7 4589 aa3.46□□□□□ -1.86
FNDC3A-206ENST00000541916 HERC1Q15751 4861 aa3.46□□□□□ -1.86
FNDC3A-206ENST00000541916 SPRR2DP22532 72 aa3.46□□□□□ -1.86
FNDC3A-206ENST00000541916 KRTAP9-6A0A140TA67 174 aa3.46□□□□□ -1.86
FNDC3A-206ENST00000541916 APOBP04114 4563 aaKnown RBP3.44□□□□□ -1.86
FNDC3A-206ENST00000541916 HECTD4Q9Y4D8 3996 aa3.44□□□□□ -1.86
FNDC3A-206ENST00000541916 KRTAP19-1Q8IUB9 90 aa3.44□□□□□ -1.86
FNDC3A-206ENST00000541916 PKHD1L1Q86WI1 4243 aa3.44□□□□□ -1.86
FNDC3A-206ENST00000541916 HSPG2P98160 4391 aa3.41□□□□□ -1.86
FNDC3A-206ENST00000541916 KRTAP23-1A1A580 65 aa3.4□□□□□ -1.87
FNDC3A-206ENST00000541916 PCLOQ9Y6V0 5065 aa3.39□□□□□ -1.87
FNDC3A-206ENST00000541916 LCE2BO14633 110 aa3.36□□□□□ -1.87
FNDC3A-206ENST00000541916 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
FNDC3A-206ENST00000541916 KRTAP9-8Q9BYQ0 159 aa3.33□□□□□ -1.88
FNDC3A-206ENST00000541916 KRTAP19-5Q3LI72 72 aa3.32□□□□□ -1.88
FNDC3A-206ENST00000541916 HYDINQ4G0P3 5121 aa3.31□□□□□ -1.88
FNDC3A-206ENST00000541916 INE1O15225 51 aa3.31□□□□□ -1.88
FNDC3A-206ENST00000541916 MYCBP2O75592 4640 aa3.3□□□□□ -1.88
FNDC3A-206ENST00000541916 KRTAP19-8Q3LI54 63 aa3.3□□□□□ -1.88
FNDC3A-206ENST00000541916 LCE2CQ5TA81 110 aa3.3□□□□□ -1.88
FNDC3A-206ENST00000541916 LCE2DQ5TA82 110 aaPredicted RBP3.3□□□□□ -1.88
FNDC3A-206ENST00000541916 LRP1Q07954 4544 aaKnown RBP3.28□□□□□ -1.88
FNDC3A-206ENST00000541916 KRTAP9-3Q9BYQ3 159 aa3.28□□□□□ -1.89
FNDC3A-206ENST00000541916 PKD1P98161 4303 aa3.25□□□□□ -1.89
FNDC3A-206ENST00000541916 EPPK1P58107 5090 aaKnown RBP3.23□□□□□ -1.89
FNDC3A-206ENST00000541916 KMT2CQ8NEZ4 4911 aaKnown RBP3.22□□□□□ -1.89
FNDC3A-206ENST00000541916 MT1BP07438 61 aa3.21□□□□□ -1.9
FNDC3A-206ENST00000541916 PKHD1P08F94 4074 aa3.2□□□□□ -1.9
FNDC3A-206ENST00000541916 KRTAP9-7A8MTY7 169 aa3.19□□□□□ -1.9
FNDC3A-206ENST00000541916 KRTAP12-4P60329 112 aa3.19□□□□□ -1.9
FNDC3A-206ENST00000541916 TNXBP22105 4242 aa3.17□□□□□ -1.9
FNDC3A-206ENST00000541916 ABCA13Q86UQ4 5058 aa3.17□□□□□ -1.9
FNDC3A-206ENST00000541916 MT1XP80297 61 aa3.17□□□□□ -1.9
FNDC3A-206ENST00000541916 LCE2AQ5TA79 106 aaPredicted RBP3.15□□□□□ -1.9
FNDC3A-206ENST00000541916 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
FNDC3A-206ENST00000541916 LPAP08519 4548 aa3.14□□□□□ -1.91
FNDC3A-206ENST00000541916 LRP2P98164 4655 aa3.13□□□□□ -1.91
FNDC3A-206ENST00000541916 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
FNDC3A-206ENST00000541916 KRTAP19-4Q3LI73 84 aa3.13□□□□□ -1.91
FNDC3A-206ENST00000541916 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
FNDC3A-206ENST00000541916 KRTAP4-8A0A0G2JLE6 195 aa3.11□□□□□ -1.91
FNDC3A-206ENST00000541916 KRTAP4-8Q9BYQ9 185 aa3.11□□□□□ -1.91
FNDC3A-206ENST00000541916 MT1GP13640 62 aa3.1□□□□□ -1.91
FNDC3A-206ENST00000541916 LCE3BQ5TA77 95 aa3.09□□□□□ -1.92
FNDC3A-206ENST00000541916 KRTAP19-2Q3LHN2 52 aa3.08□□□□□ -1.92
FNDC3A-206ENST00000541916 MUC17Q685J3 4493 aa3.07□□□□□ -1.92
FNDC3A-206ENST00000541916 MT4P47944 62 aa3.04□□□□□ -1.92
FNDC3A-206ENST00000541916 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.03□□□□□ -1.93
FNDC3A-206ENST00000541916 KRTAP19-3Q7Z4W3 81 aa3.02□□□□□ -1.93
FNDC3A-206ENST00000541916 SPRR5A0A1B0GTR4 108 aa3.01□□□□□ -1.93
FNDC3A-206ENST00000541916 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms