RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 LUZP6Q538Z0 58 aa1.66□□□□□ -2.14
KNTC1-211ENST00000541427 SPINK6Q6UWN8 80 aa1.66□□□□□ -2.14
KNTC1-211ENST00000541427 PRR15Q8IV56 129 aa1.66□□□□□ -2.14
KNTC1-211ENST00000541427 CYSTM1Q9H1C7 97 aa1.66□□□□□ -2.14
KNTC1-211ENST00000541427 NDUFS5O43920 106 aa1.65□□□□□ -2.15
KNTC1-211ENST00000541427 C9orf153Q5TBE3 101 aa1.65□□□□□ -2.15
KNTC1-211ENST00000541427 H7BZZ5 65 aa1.64□□□□□ -2.15
KNTC1-211ENST00000541427 PSPHP1O15172 72 aa1.64□□□□□ -2.15
KNTC1-211ENST00000541427 TMEM258P61165 79 aa1.64□□□□□ -2.15
KNTC1-211ENST00000541427 SRRM2Q9UQ35 2752 aaKnown RBP1.63□□□□□ -2.15
KNTC1-211ENST00000541427 TMEM254Q8TBM7 123 aa1.63□□□□□ -2.15
KNTC1-211ENST00000541427 C8orf87E5RJ46 101 aa1.62□□□□□ -2.15
KNTC1-211ENST00000541427 H3BPC8 53 aa1.62□□□□□ -2.15
KNTC1-211ENST00000541427 NDUFC1O43677 76 aa1.62□□□□□ -2.15
KNTC1-211ENST00000541427 NDUFB1O75438 58 aa1.62□□□□□ -2.15
KNTC1-211ENST00000541427 SPINK1P00995 79 aa1.62□□□□□ -2.15
KNTC1-211ENST00000541427 HRES1P13985 223 aa1.62□□□□□ -2.15
KNTC1-211ENST00000541427 PMAIP1Q13794 54 aa1.62□□□□□ -2.15
KNTC1-211ENST00000541427 CASC2Q6XLA1 102 aa1.62□□□□□ -2.15
KNTC1-211ENST00000541427 C20orf197Q8N268 126 aa1.62□□□□□ -2.15
KNTC1-211ENST00000541427 LIMD2Q9BT23 127 aa1.62□□□□□ -2.15
KNTC1-211ENST00000541427 PKHD1L1Q86WI1 4243 aa1.62□□□□□ -2.15
KNTC1-211ENST00000541427 KIAA1109Q2LD37 5005 aa1.61□□□□□ -2.15
KNTC1-211ENST00000541427 PKHD1P08F94 4074 aa1.61□□□□□ -2.15
KNTC1-211ENST00000541427 IGHV6-1A0A0B4J1U7 121 aa1.61□□□□□ -2.15
KNTC1-211ENST00000541427 hDV103S1A0JD37 113 aa1.61□□□□□ -2.15
KNTC1-211ENST00000541427 ATP5EP56381 51 aaPredicted RBP1.61□□□□□ -2.15
KNTC1-211ENST00000541427 RPS28P62857 69 aaKnown RBP1.61□□□□□ -2.15
KNTC1-211ENST00000541427 SPAG11AQ6PDA7 123 aa1.61□□□□□ -2.15
KNTC1-211ENST00000541427 WFDC13Q8IUB5 93 aa1.61□□□□□ -2.15
KNTC1-211ENST00000541427 MRPL34Q9BQ48 92 aaKnown RBP1.61□□□□□ -2.15
KNTC1-211ENST00000541427 TP53AIP1Q9HCN2 124 aa1.61□□□□□ -2.15
KNTC1-211ENST00000541427 R4GN34 69 aa1.61□□□□□ -2.15
KNTC1-211ENST00000541427 FAT1Q14517 4588 aa1.61□□□□□ -2.15
KNTC1-211ENST00000541427 TRAV22A0A0B4J277 110 aa1.6□□□□□ -2.15
KNTC1-211ENST00000541427 FAM236DA0A1B0GTK5 79 aa1.6□□□□□ -2.15
KNTC1-211ENST00000541427 FAM236CP0DP71 79 aa1.6□□□□□ -2.15
KNTC1-211ENST00000541427 HRCT1Q6UXD1 115 aa1.6□□□□□ -2.15
KNTC1-211ENST00000541427 CYP4F30PQ9H0H9 118 aa1.6□□□□□ -2.15
KNTC1-211ENST00000541427 EPPK1P58107 5090 aaKnown RBP1.59□□□□□ -2.15
KNTC1-211ENST00000541427 VPS13BQ7Z7G8 4022 aa1.59□□□□□ -2.15
KNTC1-211ENST00000541427 SMR3BP02814 79 aaPredicted RBP1.59□□□□□ -2.15
KNTC1-211ENST00000541427 MP68P56378 58 aa1.59□□□□□ -2.15
KNTC1-211ENST00000541427 RBM12B-AS1Q9P1G2 102 aa1.59□□□□□ -2.15
KNTC1-211ENST00000541427 SNURFQ9Y675 71 aa1.59□□□□□ -2.15
KNTC1-211ENST00000541427 BIRC6Q9NR09 4857 aa1.58□□□□□ -2.16
KNTC1-211ENST00000541427 H0Y9P7 68 aa1.58□□□□□ -2.16
KNTC1-211ENST00000541427 Q5VSD8 79 aa1.58□□□□□ -2.16
KNTC1-211ENST00000541427 SERP1Q9Y6X1 66 aa1.58□□□□□ -2.16
KNTC1-211ENST00000541427 HSPG2P98160 4391 aa1.58□□□□□ -2.16
KNTC1-211ENST00000541427 HMCN1Q96RW7 5635 aa1.58□□□□□ -2.16
KNTC1-211ENST00000541427 HERC2O95714 4834 aa1.57□□□□□ -2.16
KNTC1-211ENST00000541427 LOC101927531A0A1B0GV80 90 aa1.57□□□□□ -2.16
KNTC1-211ENST00000541427 MT1HL1P0DM35 61 aa1.57□□□□□ -2.16
KNTC1-211ENST00000541427 LINC00313P59037 77 aa1.57□□□□□ -2.16
KNTC1-211ENST00000541427 LINC00208Q96KT6 92 aa1.57□□□□□ -2.16
KNTC1-211ENST00000541427 C20orf166-AS1Q96NR2 134 aa1.57□□□□□ -2.16
KNTC1-211ENST00000541427 FLG2Q5D862 2391 aaPredicted RBP1.56□□□□□ -2.16
KNTC1-211ENST00000541427 FAT3Q8TDW7 4589 aa1.56□□□□□ -2.16
KNTC1-211ENST00000541427 FP248Q71RG6 208 aaPredicted RBP1.56□□□□□ -2.16
KNTC1-211ENST00000541427 ABCA13Q86UQ4 5058 aa1.55□□□□□ -2.16
KNTC1-211ENST00000541427 TNXBP22105 4242 aa1.54□□□□□ -2.16
KNTC1-211ENST00000541427 LRP1Q07954 4544 aaKnown RBP1.54□□□□□ -2.16
KNTC1-211ENST00000541427 DMAC1Q96GE9 116 aa1.53□□□□□ -2.16
KNTC1-211ENST00000541427 Q1T7F1 81 aa1.52□□□□□ -2.17
KNTC1-211ENST00000541427 PCOTHQ58A44 107 aa1.52□□□□□ -2.17
KNTC1-211ENST00000541427 C7orf65Q6ZTY9 151 aa1.52□□□□□ -2.17
KNTC1-211ENST00000541427 RETNLBQ9BQ08 111 aa1.52□□□□□ -2.17
KNTC1-211ENST00000541427 A8MUN3 132 aa1.51□□□□□ -2.17
KNTC1-211ENST00000541427 RPL37P61927 97 aaKnown RBP1.51□□□□□ -2.17
KNTC1-211ENST00000541427 TPRXLQ17RH7 258 aa1.51□□□□□ -2.17
KNTC1-211ENST00000541427 COA5Q86WW8 74 aa1.51□□□□□ -2.17
KNTC1-211ENST00000541427 MYCBP2O75592 4640 aa1.51□□□□□ -2.17
KNTC1-211ENST00000541427 C9orf92A6NGG3 77 aa1.5□□□□□ -2.17
KNTC1-211ENST00000541427 K7ERS5 55 aa1.49□□□□□ -2.17
KNTC1-211ENST00000541427 ACYP2P14621 99 aa1.49□□□□□ -2.17
KNTC1-211ENST00000541427 KRTAP25-1Q3LHN0 102 aa1.49□□□□□ -2.17
KNTC1-211ENST00000541427 LINC01558Q9Y6Z2 57 aa1.49□□□□□ -2.17
KNTC1-211ENST00000541427 FCGBPQ9Y6R7 5405 aaPredicted RBP1.49□□□□□ -2.17
KNTC1-211ENST00000541427 SPINK7P58062 85 aa1.48□□□□□ -2.17
KNTC1-211ENST00000541427 KTN1-AS1Q86SY8 53 aa1.48□□□□□ -2.17
KNTC1-211ENST00000541427 PCLOQ9Y6V0 5065 aa1.47□□□□□ -2.17
KNTC1-211ENST00000541427 Q5VV11 94 aa1.47□□□□□ -2.17
KNTC1-211ENST00000541427 COX6B2Q6YFQ2 88 aa1.47□□□□□ -2.17
KNTC1-211ENST00000541427 LCA10Q71F78 164 aa1.47□□□□□ -2.17
KNTC1-211ENST00000541427 ATP11AUNQ6ZP68 121 aa1.46□□□□□ -2.18
KNTC1-211ENST00000541427 HMCN2Q8NDA2 5059 aa1.46□□□□□ -2.18
KNTC1-211ENST00000541427 HERC1Q15751 4861 aa1.45□□□□□ -2.18
KNTC1-211ENST00000541427 DMBT1Q9UGM3 2413 aaPredicted RBP1.45□□□□□ -2.18
KNTC1-211ENST00000541427 KRTAP19-2Q3LHN2 52 aa1.44□□□□□ -2.18
KNTC1-211ENST00000541427 MUC17Q685J3 4493 aa1.44□□□□□ -2.18
KNTC1-211ENST00000541427 LRP2P98164 4655 aa1.44□□□□□ -2.18
KNTC1-211ENST00000541427 A6NED7 52 aa1.43□□□□□ -2.18
KNTC1-211ENST00000541427 CHKB-CPT1BH3BT56 60 aa1.43□□□□□ -2.18
KNTC1-211ENST00000541427 LINC01554Q52M75 96 aa1.43□□□□□ -2.18
KNTC1-211ENST00000541427 PRR15LQ9BU68 103 aa1.43□□□□□ -2.18
KNTC1-211ENST00000541427 SPTSSBQ8NFR3 76 aa1.42□□□□□ -2.18
KNTC1-211ENST00000541427 A0A1B0GU69 56 aa1.41□□□□□ -2.18
KNTC1-211ENST00000541427 KRTAP12-1P59990 96 aa1.41□□□□□ -2.18
KNTC1-211ENST00000541427 H1FX-AS1Q4G0G2 97 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms