RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 IGKV2D-30A0A075B6S6 120 aa8.39□□□□□ -1.07
CLPTM1-202ENST00000541297 UQCR11O14957 56 aa8.38□□□□□ -1.07
CLPTM1-202ENST00000541297 BIRC6Q9NR09 4857 aa8.36□□□□□ -1.07
CLPTM1-202ENST00000541297 ABCA13Q86UQ4 5058 aa8.36□□□□□ -1.07
CLPTM1-202ENST00000541297 CSAG1Q6PB30 78 aa8.31□□□□□ -1.08
CLPTM1-202ENST00000541297 HERC2O95714 4834 aa8.3□□□□□ -1.08
CLPTM1-202ENST00000541297 C20orf166-AS1Q96NR2 134 aa8.22□□□□□ -1.09
CLPTM1-202ENST00000541297 A8MUU9 505 aa8.21□□□□□ -1.09
CLPTM1-202ENST00000541297 J3QL48 77 aa8.17□□□□□ -1.1
CLPTM1-202ENST00000541297 LPAP08519 4548 aa8.15□□□□□ -1.1
CLPTM1-202ENST00000541297 XP32Q5T750 250 aa8.13□□□□□ -1.11
CLPTM1-202ENST00000541297 PCLOQ9Y6V0 5065 aa8.08□□□□□ -1.12
CLPTM1-202ENST00000541297 LRP2P98164 4655 aa8.07□□□□□ -1.12
CLPTM1-202ENST00000541297 H0YAA0 97 aa8.07□□□□□ -1.12
CLPTM1-202ENST00000541297 RPL37P61927 97 aaKnown RBP8.06□□□□□ -1.12
CLPTM1-202ENST00000541297 TPRXLQ17RH7 258 aa8.04□□□□□ -1.12
CLPTM1-202ENST00000541297 KRTAP3-1Q9BYR8 98 aa8□□□□□ -1.13
CLPTM1-202ENST00000541297 A0A1B0GU33 70 aa7.99□□□□□ -1.13
CLPTM1-202ENST00000541297 ROMO1P60602 79 aa7.98□□□□□ -1.13
CLPTM1-202ENST00000541297 HERC1Q15751 4861 aa7.95□□□□□ -1.14
CLPTM1-202ENST00000541297 H1FX-AS1Q4G0G2 97 aa7.94□□□□□ -1.14
CLPTM1-202ENST00000541297 CRIPTQ9P021 101 aa7.91□□□□□ -1.14
CLPTM1-202ENST00000541297 KRTAP25-1Q3LHN0 102 aa7.91□□□□□ -1.14
CLPTM1-202ENST00000541297 P0C880 135 aa7.87□□□□□ -1.15
CLPTM1-202ENST00000541297 COX6B2Q6YFQ2 88 aa7.8□□□□□ -1.16
CLPTM1-202ENST00000541297 HMCN2Q8NDA2 5059 aa7.76□□□□□ -1.17
CLPTM1-202ENST00000541297 K7ERS5 55 aa7.76□□□□□ -1.17
CLPTM1-202ENST00000541297 SEC61BP60468 96 aaKnown RBP7.76□□□□□ -1.17
CLPTM1-202ENST00000541297 MUC17Q685J3 4493 aa7.72□□□□□ -1.17
CLPTM1-202ENST00000541297 KRTAP4-1Q9BYQ7 146 aa7.68□□□□□ -1.18
CLPTM1-202ENST00000541297 MUC2Q02817 5179 aa7.67□□□□□ -1.18
CLPTM1-202ENST00000541297 KRTAP10-6P60371 365 aaPredicted RBP7.65□□□□□ -1.18
CLPTM1-202ENST00000541297 KRTAP13-4Q3LI77 160 aa7.63□□□□□ -1.19
CLPTM1-202ENST00000541297 KRTAP3-3Q9BYR6 98 aa7.63□□□□□ -1.19
CLPTM1-202ENST00000541297 A0A0D9SG42 100 aa7.61□□□□□ -1.19
CLPTM1-202ENST00000541297 KRTAP3-2Q9BYR7 98 aa7.58□□□□□ -1.2
CLPTM1-202ENST00000541297 NDUFAF8A1L188 74 aa7.57□□□□□ -1.2
CLPTM1-202ENST00000541297 S4R3F8 94 aa7.57□□□□□ -1.2
CLPTM1-202ENST00000541297 SPINT4Q6UDR6 99 aa7.56□□□□□ -1.2
CLPTM1-202ENST00000541297 UBR4Q5T4S7 5183 aa7.48□□□□□ -1.21
CLPTM1-202ENST00000541297 A0A0A0MQY5 61 aa7.47□□□□□ -1.21
CLPTM1-202ENST00000541297 C10orf95Q9H7T3 257 aa7.47□□□□□ -1.21
CLPTM1-202ENST00000541297 KRTAP19-2Q3LHN2 52 aa7.43□□□□□ -1.22
CLPTM1-202ENST00000541297 RNF213Q63HN8 5207 aa7.42□□□□□ -1.22
CLPTM1-202ENST00000541297 KRTAP12-2P59991 146 aa7.4□□□□□ -1.22
CLPTM1-202ENST00000541297 KRTAP15-1Q3LI76 137 aa7.37□□□□□ -1.23
CLPTM1-202ENST00000541297 FAT4Q6V0I7 4981 aa7.33□□□□□ -1.24
CLPTM1-202ENST00000541297 FLGP20930 4061 aaPredicted RBP7.32□□□□□ -1.24
CLPTM1-202ENST00000541297 KRTAP12-1P59990 96 aa7.31□□□□□ -1.24
CLPTM1-202ENST00000541297 LCE2CQ5TA81 110 aa7.24□□□□□ -1.25
CLPTM1-202ENST00000541297 M0QZ58 72 aa7.17□□□□□ -1.26
CLPTM1-202ENST00000541297 MT1HP80294 61 aa7.1□□□□□ -1.27
CLPTM1-202ENST00000541297 M0R2T5 61 aa7.09□□□□□ -1.27
CLPTM1-202ENST00000541297 LORP23490 312 aaPredicted RBP7.06□□□□□ -1.28
CLPTM1-202ENST00000541297 LUZP6Q538Z0 58 aa7.05□□□□□ -1.28
CLPTM1-202ENST00000541297 R4GN34 69 aa7□□□□□ -1.29
CLPTM1-202ENST00000541297 PLAC4Q8WY50 150 aa6.85□□□□□ -1.31
CLPTM1-202ENST00000541297 KRTAP9-8Q9BYQ0 159 aa6.84□□□□□ -1.31
CLPTM1-202ENST00000541297 MT2AP02795 61 aa6.83□□□□□ -1.32
CLPTM1-202ENST00000541297 MT1FP04733 61 aa6.82□□□□□ -1.32
CLPTM1-202ENST00000541297 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
CLPTM1-202ENST00000541297 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
CLPTM1-202ENST00000541297 KRTAP19-1Q8IUB9 90 aa6.7□□□□□ -1.34
CLPTM1-202ENST00000541297 SPRR2GQ9BYE4 73 aa6.69□□□□□ -1.34
CLPTM1-202ENST00000541297 CAMK2N1Q7Z7J9 78 aa6.67□□□□□ -1.34
CLPTM1-202ENST00000541297 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
CLPTM1-202ENST00000541297 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
CLPTM1-202ENST00000541297 KRTAP19-8Q3LI54 63 aa6.48□□□□□ -1.37
CLPTM1-202ENST00000541297 MT1BP07438 61 aa6.45□□□□□ -1.38
CLPTM1-202ENST00000541297 TNP1P09430 55 aa6.42□□□□□ -1.38
CLPTM1-202ENST00000541297 LCE2BO14633 110 aa6.42□□□□□ -1.38
CLPTM1-202ENST00000541297 USH2AO75445 5202 aa6.37□□□□□ -1.39
CLPTM1-202ENST00000541297 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.4
CLPTM1-202ENST00000541297 SPRR5A0A1B0GTR4 108 aa6.31□□□□□ -1.4
CLPTM1-202ENST00000541297 MT1XP80297 61 aa6.27□□□□□ -1.41
CLPTM1-202ENST00000541297 KRTAP10-5P60370 271 aa6.26□□□□□ -1.41
CLPTM1-202ENST00000541297 FSIP2Q5CZC0 6907 aa6.18□□□□□ -1.42
CLPTM1-202ENST00000541297 PRO2289Q9P1D8 64 aa6.13□□□□□ -1.43
CLPTM1-202ENST00000541297 LCE3AQ5TA76 89 aa6.09□□□□□ -1.43
CLPTM1-202ENST00000541297 SSPOA2VEC9 5147 aa6.08□□□□□ -1.44
CLPTM1-202ENST00000541297 KRTAP10-7P60409 375 aaPredicted RBP6.06□□□□□ -1.44
CLPTM1-202ENST00000541297 LCE2DQ5TA82 110 aaPredicted RBP6.02□□□□□ -1.45
CLPTM1-202ENST00000541297 KRTAP10-12P60413 245 aa5.97□□□□□ -1.45
CLPTM1-202ENST00000541297 KMT2DO14686 5537 aa5.96□□□□□ -1.46
CLPTM1-202ENST00000541297 KRTAP19-6Q3LI70 58 aa5.93□□□□□ -1.46
CLPTM1-202ENST00000541297 KRTAP8-1Q8IUC2 63 aa5.9□□□□□ -1.47
CLPTM1-202ENST00000541297 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.47
CLPTM1-202ENST00000541297 KRTAP9-2Q9BYQ4 174 aa5.84□□□□□ -1.47
CLPTM1-202ENST00000541297 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
CLPTM1-202ENST00000541297 FCGBPQ9Y6R7 5405 aaPredicted RBP5.79□□□□□ -1.48
CLPTM1-202ENST00000541297 INE1O15225 51 aa5.77□□□□□ -1.49
CLPTM1-202ENST00000541297 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
CLPTM1-202ENST00000541297 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
CLPTM1-202ENST00000541297 CRCT1Q9UGL9 99 aa5.62□□□□□ -1.51
CLPTM1-202ENST00000541297 KRTAP19-7Q3SYF9 63 aa5.58□□□□□ -1.52
CLPTM1-202ENST00000541297 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
CLPTM1-202ENST00000541297 MT1EP04732 61 aa5.46□□□□□ -1.53
CLPTM1-202ENST00000541297 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
CLPTM1-202ENST00000541297 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
CLPTM1-202ENST00000541297 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms